Experiment: D-Saccharic potassium salt (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0984 and Atu0985 are separated by 462 nucleotides Atu0985 and Atu0986 are separated by 294 nucleotides Atu0986 and Atu0987 are separated by 50 nucleotides
Atu0984: Atu0984 - aminopeptidase N, at 977,570 to 980,218
Atu0984
Atu0985: Atu0985 - permease, at 980,681 to 981,616
Atu0985
Atu0986: Atu0986 - hypothetical protein, at 981,911 to 982,099
Atu0986
Atu0987: Atu0987 - DNA polymerase, at 982,150 to 983,040
Atu0987
Position (kb)
980
981
982 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 979.718 kb on + strand, within Atu0984 at 979.851 kb on - strand, within Atu0984 at 979.887 kb on + strand, within Atu0984 at 979.887 kb on + strand, within Atu0984 at 979.979 kb on - strand at 980.002 kb on + strand at 980.069 kb on - strand at 980.071 kb on - strand at 980.111 kb on - strand at 980.182 kb on - strand at 980.383 kb on + strand at 980.391 kb on - strand at 980.592 kb on + strand at 980.594 kb on - strand at 980.621 kb on + strand at 980.695 kb on + strand at 980.726 kb on - strand at 980.825 kb on + strand, within Atu0985 at 980.876 kb on + strand, within Atu0985 at 980.951 kb on - strand, within Atu0985 at 980.997 kb on - strand, within Atu0985 at 981.045 kb on - strand, within Atu0985 at 981.173 kb on - strand, within Atu0985 at 981.186 kb on - strand, within Atu0985 at 981.382 kb on - strand, within Atu0985 at 981.468 kb on + strand, within Atu0985 at 981.488 kb on + strand, within Atu0985 at 981.560 kb on + strand at 981.612 kb on + strand at 981.612 kb on + strand at 981.620 kb on - strand at 981.640 kb on - strand at 981.640 kb on - strand at 981.695 kb on - strand at 981.695 kb on - strand at 981.695 kb on - strand at 981.773 kb on - strand at 981.782 kb on + strand at 981.790 kb on - strand at 981.790 kb on - strand at 981.832 kb on - strand at 981.953 kb on - strand, within Atu0986 at 982.097 kb on - strand at 982.133 kb on + strand at 982.133 kb on + strand at 982.141 kb on - strand at 982.141 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Saccharic potassium salt (C) remove 979,718 + Atu0984 0.81 -0.5 979,851 - Atu0984 0.86 -1.4 979,887 + Atu0984 0.87 -0.2 979,887 + Atu0984 0.87 +0.3 979,979 - +0.4 980,002 + +1.2 980,069 - -0.1 980,071 - +1.9 980,111 - +0.1 980,182 - +0.2 980,383 + +0.3 980,391 - -0.8 980,592 + +0.4 980,594 - -0.1 980,621 + +0.5 980,695 + -1.7 980,726 - +0.5 980,825 + Atu0985 0.15 -2.0 980,876 + Atu0985 0.21 -0.6 980,951 - Atu0985 0.29 -0.2 980,997 - Atu0985 0.34 -0.2 981,045 - Atu0985 0.39 -0.4 981,173 - Atu0985 0.53 +0.6 981,186 - Atu0985 0.54 +0.8 981,382 - Atu0985 0.75 -0.8 981,468 + Atu0985 0.84 +0.2 981,488 + Atu0985 0.86 +0.8 981,560 + +0.4 981,612 + -1.8 981,612 + -0.3 981,620 - +0.5 981,640 - +0.3 981,640 - -0.1 981,695 - -1.7 981,695 - -1.2 981,695 - -0.0 981,773 - +2.5 981,782 + +1.6 981,790 - +0.1 981,790 - -0.5 981,832 - +0.0 981,953 - Atu0986 0.22 -0.8 982,097 - -1.8 982,133 + +1.8 982,133 + -0.4 982,141 - +0.1 982,141 - +0.4
Or see this region's nucleotide sequence