Strain Fitness in Escherichia coli BW25113 around b2041

Experiment: Chloramphenicol 0.0025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0025 mg/ml
2,109,009	-				-0.2
2,109,076	-				-0.7
2,109,148	-				+2.8
2,109,148	-				-0.5
2,109,148	-				-2.9
2,109,159	-				-0.2
2,109,159	-				+0.8
2,109,166	-				+0.2
2,109,234	+	rfbD	b2040	0.15	-1.1
2,109,236	+	rfbD	b2040	0.15	-0.0
2,109,239	-				-0.2
2,109,239	-	rfbD	b2040	0.15	+0.8
2,109,240	-	rfbD	b2040	0.15	-0.9
2,109,253	+	rfbD	b2040	0.17	-2.0
2,109,253	+	rfbD	b2040	0.17	-1.1
2,109,254	-	rfbD	b2040	0.17	+1.0
2,109,266	-	rfbD	b2040	0.18	-0.4
2,109,272	-	rfbD	b2040	0.19	-0.9
2,109,274	+	rfbD	b2040	0.19	-0.7
2,109,299	-	rfbD	b2040	0.22	+1.3
2,109,299	-	rfbD	b2040	0.22	-0.2
2,109,329	-	rfbD	b2040	0.25	-0.0
2,109,329	-	rfbD	b2040	0.25	-0.8
2,109,329	-	rfbD	b2040	0.25	-0.7
2,109,336	+	rfbD	b2040	0.26	+0.5
2,109,344	-	rfbD	b2040	0.27	-1.2
2,109,353	-	rfbD	b2040	0.28	+1.1
2,109,360	-	rfbD	b2040	0.29	+0.1
2,109,362	+	rfbD	b2040	0.29	-0.1
2,109,362	+	rfbD	b2040	0.29	+1.3
2,109,370	-	rfbD	b2040	0.30	-1.1
2,109,370	-	rfbD	b2040	0.30	-1.6
2,109,370	-	rfbD	b2040	0.30	-1.8
2,109,370	-	rfbD	b2040	0.30	-0.5
2,109,370	-	rfbD	b2040	0.30	+0.1
2,109,375	-	rfbD	b2040	0.30	-0.3
2,109,409	+	rfbD	b2040	0.34	+0.2
2,109,412	-	rfbD	b2040	0.35	-0.2
2,109,412	-	rfbD	b2040	0.35	-1.2
2,109,412	-	rfbD	b2040	0.35	-1.5
2,109,412	-	rfbD	b2040	0.35	-1.0
2,109,421	+	rfbD	b2040	0.36	-0.6
2,109,430	+	rfbD	b2040	0.37	-0.9
2,109,438	-	rfbD	b2040	0.37	+0.2
2,109,438	-	rfbD	b2040	0.37	+0.6
2,109,521	+	rfbD	b2040	0.47	-0.8
2,109,521	+	rfbD	b2040	0.47	-0.4
2,109,653	-	rfbD	b2040	0.61	+2.1
2,109,653	-	rfbD	b2040	0.61	+0.2
2,109,653	-	rfbD	b2040	0.61	+0.2
2,109,698	-	rfbD	b2040	0.66	-1.5
2,109,726	-	rfbD	b2040	0.69	+0.1
2,109,742	+	rfbD	b2040	0.71	-0.2
2,109,742	+	rfbD	b2040	0.71	-0.8
2,109,742	+	rfbD	b2040	0.71	-1.0
2,109,767	-	rfbD	b2040	0.74	-0.8
2,109,797	+	rfbD	b2040	0.77	-1.4
2,109,797	+	rfbD	b2040	0.77	-0.5
2,109,805	-	rfbD	b2040	0.78	+0.1
2,109,805	-	rfbD	b2040	0.78	-0.9
2,109,805	-	rfbD	b2040	0.78	-1.8
2,109,805	-	rfbD	b2040	0.78	-1.5
2,109,805	-	rfbD	b2040	0.78	+0.8
2,109,815	-	rfbD	b2040	0.79	-0.2
2,109,815	-	rfbD	b2040	0.79	+0.4
2,109,861	+	rfbD	b2040	0.84	-0.2
2,109,908	-	rfbD	b2040	0.90	-0.4
2,109,936	+				-2.4
2,109,936	+				-1.0
2,109,943	+				-1.8
2,109,945	+				-0.9
2,109,945	-				-1.5
2,109,947	+				-0.8
2,109,958	-				-0.9
2,109,958	-				-1.0
2,109,958	-				+0.4
2,109,960	-				-0.8
2,109,963	-				+0.8
2,109,963	-				+0.1
2,109,963	-				-1.8
2,109,963	-				-0.6
2,109,965	+				-0.8
2,109,965	-				-1.2
2,109,995	+				-0.8
2,110,018	-				-0.4
2,110,036	-				-1.5
2,110,059	-				+0.4
2,110,087	-				-0.9
2,110,087	-				-0.6
2,110,087	-				+0.5
2,110,124	-	rfbB	b2041	0.11	+0.5
2,110,124	-	rfbB	b2041	0.11	+0.4
2,110,125	+	rfbB	b2041	0.12	-0.1
2,110,125	+	rfbB	b2041	0.12	-0.2
2,110,139	-	rfbB	b2041	0.13	+0.6
2,110,152	-	rfbB	b2041	0.14	-0.8
2,110,172	+	rfbB	b2041	0.16	-1.9
2,110,172	+	rfbB	b2041	0.16	-0.8
2,110,172	-	rfbB	b2041	0.16	-0.6
2,110,173	-	rfbB	b2041	0.16	-1.8
2,110,173	-	rfbB	b2041	0.16	+0.7
2,110,173	-	rfbB	b2041	0.16	-1.7
2,110,196	+	rfbB	b2041	0.18	-0.5
2,110,196	+	rfbB	b2041	0.18	-1.4
2,110,206	-	rfbB	b2041	0.19	-0.6
2,110,206	-	rfbB	b2041	0.19	-0.2
2,110,213	-	rfbB	b2041	0.20	+0.1
2,110,246	+	rfbB	b2041	0.23	-0.4
2,110,246	+	rfbB	b2041	0.23	-0.2
2,110,258	-	rfbB	b2041	0.24	+0.8
2,110,258	-	rfbB	b2041	0.24	+0.2
2,110,275	+	rfbB	b2041	0.25	-0.8
2,110,275	+	rfbB	b2041	0.25	-1.6
2,110,275	+	rfbB	b2041	0.25	+0.1
2,110,278	+	rfbB	b2041	0.26	-1.5
2,110,279	-	rfbB	b2041	0.26	+0.8
2,110,281	-	rfbB	b2041	0.26	-2.2
2,110,305	+	rfbB	b2041	0.28	-1.2
2,110,305	+	rfbB	b2041	0.28	-0.8
2,110,316	-	rfbB	b2041	0.29	-0.5
2,110,316	-	rfbB	b2041	0.29	-1.2
2,110,332	+	rfbB	b2041	0.31	-0.3
2,110,352	+	rfbB	b2041	0.32	-0.8
2,110,352	+	rfbB	b2041	0.32	-2.5
2,110,352	+	rfbB	b2041	0.32	-1.2
2,110,354	+	rfbB	b2041	0.33	-1.2
2,110,357	-	rfbB	b2041	0.33	-1.1
2,110,360	-	rfbB	b2041	0.33	-0.3
2,110,362	-	rfbB	b2041	0.33	+0.0
2,110,362	-	rfbB	b2041	0.33	+0.3
2,110,362	-	rfbB	b2041	0.33	+0.8
2,110,362	-	rfbB	b2041	0.33	-2.0
2,110,362	-	rfbB	b2041	0.33	-0.1
2,110,372	+	rfbB	b2041	0.34	+0.5
2,110,372	+	rfbB	b2041	0.34	+0.4
2,110,372	-	rfbB	b2041	0.34	-0.3
2,110,374	+	rfbB	b2041	0.34	+0.1
2,110,379	+	rfbB	b2041	0.35	+0.8
2,110,379	+	rfbB	b2041	0.35	+0.8
2,110,379	+	rfbB	b2041	0.35	-2.2
2,110,380	+	rfbB	b2041	0.35	+0.8
2,110,380	+	rfbB	b2041	0.35	-1.5
2,110,384	-	rfbB	b2041	0.35	+0.8
2,110,384	-	rfbB	b2041	0.35	+1.1
2,110,387	-	rfbB	b2041	0.36	-0.2
2,110,387	-	rfbB	b2041	0.36	+0.2
2,110,387	-	rfbB	b2041	0.36	-0.8
2,110,393	-	rfbB	b2041	0.36	+0.8
2,110,398	+	rfbB	b2041	0.37	-1.2
2,110,414	-	rfbB	b2041	0.38	+0.5
2,110,420	+	rfbB	b2041	0.39	-2.2
2,110,434	+	rfbB	b2041	0.40	-0.8
2,110,435	+	rfbB	b2041	0.40	-1.6
2,110,496	-	rfbB	b2041	0.46	-0.0
2,110,496	-	rfbB	b2041	0.46	-1.1
2,110,533	+	rfbB	b2041	0.49	-0.9
2,110,538	-	rfbB	b2041	0.50	+0.1
2,110,556	+	rfbB	b2041	0.51	+0.2
2,110,565	+	rfbB	b2041	0.52	-1.1
2,110,565	+	rfbB	b2041	0.52	+0.2
2,110,583	+	rfbB	b2041	0.54	-0.0
2,110,586	-	rfbB	b2041	0.54	-0.2
2,110,591	-	rfbB	b2041	0.54	-0.8
2,110,602	-	rfbB	b2041	0.55	-1.7
2,110,608	-	rfbB	b2041	0.56	-0.4
2,110,608	-	rfbB	b2041	0.56	+2.1
2,110,654	+	rfbB	b2041	0.60	+0.8
2,110,658	+	rfbB	b2041	0.61	-0.9
2,110,668	+	rfbB	b2041	0.62	-0.1
2,110,673	+	rfbB	b2041	0.62	-0.6
2,110,676	-	rfbB	b2041	0.62	-0.6
2,110,676	-	rfbB	b2041	0.62	-0.6
2,110,678	+	rfbB	b2041	0.62	-2.0
2,110,678	+	rfbB	b2041	0.62	+0.4
2,110,680	-	rfbB	b2041	0.63	+0.6
2,110,681	-	rfbB	b2041	0.63	-0.4
2,110,681	-	rfbB	b2041	0.63	-0.1
2,110,737	-	rfbB	b2041	0.68	+0.8
2,110,738	+	rfbB	b2041	0.68	+0.3
2,110,739	-	rfbB	b2041	0.68	-0.8
2,110,765	-	rfbB	b2041	0.70	+0.6
2,110,810	+	rfbB	b2041	0.75	-0.1
2,110,829	+	rfbB	b2041	0.76	-0.6
2,110,833	-	rfbB	b2041	0.77	-1.7
2,110,837	-	rfbB	b2041	0.77	-0.9
2,110,842	+	rfbB	b2041	0.78	-0.2
2,110,851	-	rfbB	b2041	0.78	-0.5
2,110,852	-	rfbB	b2041	0.78	+0.1
2,110,852	-	rfbB	b2041	0.78	-1.5
2,110,865	-	rfbB	b2041	0.80	-1.8
2,110,867	-	rfbB	b2041	0.80	-1.3
2,110,867	-	rfbB	b2041	0.80	-1.1
2,110,867	-	rfbB	b2041	0.80	-0.8
2,110,867	-	rfbB	b2041	0.80	+0.6
2,110,873	-	rfbB	b2041	0.80	+0.5
2,110,873	-	rfbB	b2041	0.80	-0.1
2,110,892	+	rfbB	b2041	0.82	+0.8
2,110,950	-	rfbB	b2041	0.87	+0.1
2,110,959	+	rfbB	b2041	0.88	-1.3
2,110,959	+	rfbB	b2041	0.88	-1.2
2,110,970	-	rfbB	b2041	0.89	+1.2
2,111,011	-				-0.5
2,111,043	-				+0.6
2,111,043	-				-0.5
2,111,043	-				-0.9
2,111,045	-				-0.0
2,111,045	-				+0.2
2,111,123	-				-0.8
2,111,123	-				-1.2
2,111,126	-				-0.0
2,111,126	-				-1.5
2,111,149	-				+1.0
2,111,185	-				-0.6
2,111,185	-				-0.6
2,111,186	-				-1.5
2,111,190	-				+0.6
2,111,197	-				-0.6
2,111,197	-				+0.8
2,111,202	-				+0.8
2,111,202	-				-0.2
2,111,205	-				-1.0
2,111,205	-				+0.4
2,111,209	-				+0.1
2,111,214	-				+0.4
2,111,216	-				-1.1
2,111,216	-				-0.9
2,111,216	-				+0.3
2,111,216	-				+0.2
2,111,218	+				-2.1
2,111,223	-				-0.9
2,111,223	-				-0.8
2,111,226	+				-0.8
2,111,283	-				-0.0
2,111,283	-				-0.4
2,111,523	-				+1.8
2,111,523	-				+0.8
2,111,535	-				-1.7
2,111,535	-				+0.4
2,111,541	+				+0.5
2,111,544	-				-0.1
2,111,544	-				+0.3
2,111,549	-	galF	b2042	0.10	+0.6
2,111,590	-	galF	b2042	0.15	+0.6
2,111,652	+	galF	b2042	0.22	+0.3
2,111,703	+	galF	b2042	0.27	+0.6
2,111,703	+	galF	b2042	0.27	+1.2
2,111,721	-	galF	b2042	0.29	+0.3
2,111,737	-	galF	b2042	0.31	+2.1
2,111,737	-	galF	b2042	0.31	+0.2
2,111,741	+	galF	b2042	0.32	+0.8
2,111,786	+	galF	b2042	0.37	-0.1
2,111,824	-	galF	b2042	0.41	-0.7
2,111,832	+	galF	b2042	0.42	+0.1
2,111,832	+	galF	b2042	0.42	-0.1
2,111,832	+	galF	b2042	0.42	+0.8
2,111,841	+	galF	b2042	0.43	+0.0
2,111,893	-	galF	b2042	0.49	-0.2
2,111,952	-	galF	b2042	0.55	+0.2
2,111,956	+	galF	b2042	0.56	-0.5
2,112,009	+	galF	b2042	0.62	-0.8
2,112,026	+	galF	b2042	0.64	+0.6
2,112,084	+	galF	b2042	0.70	-0.2
2,112,084	+	galF	b2042	0.70	+1.6