Strain Fitness in Escherichia coli BW25113 around b1633
Experiment: Chloramphenicol 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.0025 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,708,996 | - | rsxE | b1632 | 0.21 | +2.0 |
1,709,004 | + | rsxE | b1632 | 0.22 | +1.8 |
1,709,034 | - | rsxE | b1632 | 0.26 | +2.5 |
1,709,096 | + | rsxE | b1632 | 0.35 | +1.8 |
1,709,096 | + | rsxE | b1632 | 0.35 | +2.1 |
1,709,106 | - | rsxE | b1632 | 0.36 | +1.8 |
1,709,123 | + | rsxE | b1632 | 0.39 | +1.8 |
1,709,128 | + | rsxE | b1632 | 0.40 | +2.6 |
1,709,182 | + | rsxE | b1632 | 0.47 | +3.3 |
1,709,254 | + | rsxE | b1632 | 0.58 | +2.7 |
1,709,303 | - | rsxE | b1632 | 0.65 | +2.5 |
1,709,320 | + | rsxE | b1632 | 0.67 | +1.0 |
1,709,330 | - | rsxE | b1632 | 0.69 | +1.8 |
1,709,330 | - | rsxE | b1632 | 0.69 | +4.3 |
1,709,393 | + | rsxE | b1632 | 0.78 | +1.8 |
1,709,445 | + | rsxE | b1632 | 0.85 | +2.1 |
1,709,464 | - | rsxE | b1632 | 0.88 | +2.5 |
1,709,517 | - | +2.3 | |||
1,709,581 | + | +0.6 | |||
1,709,581 | + | -1.4 | |||
1,709,691 | - | nth | b1633 | 0.23 | +1.2 |
1,709,760 | - | nth | b1633 | 0.33 | +0.6 |
1,709,843 | + | nth | b1633 | 0.47 | +0.2 |
1,709,859 | + | nth | b1633 | 0.49 | -1.0 |
1,709,859 | + | nth | b1633 | 0.49 | +0.6 |
1,709,876 | + | nth | b1633 | 0.52 | +0.6 |
1,709,876 | + | nth | b1633 | 0.52 | +1.3 |
1,710,159 | + | -1.0 | |||
1,710,274 | - | +0.7 | |||
1,710,551 | - | +0.3 | |||
1,710,837 | - | +0.6 | |||
1,710,838 | - | +0.2 | |||
1,710,870 | - | -0.6 | |||
1,711,174 | - | tppB | b1634 | 0.25 | +1.5 |
Or see this region's nucleotide sequence