Strain Fitness in Escherichia coli BW25113 around b1385
Experiment: Chloramphenicol 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.0025 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,444,581 | - | feaR | b1384 | 0.20 | -0.0 |
1,444,611 | - | feaR | b1384 | 0.23 | +0.7 |
1,444,640 | - | feaR | b1384 | 0.26 | -0.1 |
1,444,787 | - | feaR | b1384 | 0.42 | +1.0 |
1,444,845 | - | feaR | b1384 | 0.49 | +0.4 |
1,444,866 | - | feaR | b1384 | 0.51 | +1.5 |
1,444,866 | - | feaR | b1384 | 0.51 | +0.7 |
1,444,872 | - | feaR | b1384 | 0.52 | -0.8 |
1,444,935 | - | feaR | b1384 | 0.59 | +0.8 |
1,445,072 | + | feaR | b1384 | 0.74 | +1.8 |
1,445,230 | - | -0.7 | |||
1,445,600 | - | +1.7 | |||
1,445,620 | - | +0.2 | |||
1,445,830 | + | feaB | b1385 | 0.19 | -0.1 |
1,445,843 | - | feaB | b1385 | 0.20 | +0.2 |
1,445,934 | - | feaB | b1385 | 0.26 | -1.7 |
1,445,934 | - | feaB | b1385 | 0.26 | +0.3 |
1,445,934 | - | feaB | b1385 | 0.26 | +0.1 |
1,445,979 | - | feaB | b1385 | 0.29 | -0.3 |
1,446,256 | + | feaB | b1385 | 0.48 | +1.7 |
1,446,256 | - | feaB | b1385 | 0.48 | -0.1 |
1,446,256 | - | feaB | b1385 | 0.48 | -0.7 |
1,446,316 | + | feaB | b1385 | 0.52 | +0.5 |
1,446,351 | + | feaB | b1385 | 0.54 | +0.7 |
1,446,475 | + | feaB | b1385 | 0.62 | -1.3 |
1,446,475 | + | feaB | b1385 | 0.62 | +0.7 |
1,446,572 | - | feaB | b1385 | 0.69 | -0.9 |
1,446,628 | - | feaB | b1385 | 0.72 | -0.3 |
1,446,628 | - | feaB | b1385 | 0.72 | +1.1 |
1,446,688 | + | feaB | b1385 | 0.76 | +0.9 |
1,446,897 | - | +0.7 | |||
1,446,946 | - | -1.9 | |||
1,447,128 | - | -0.1 | |||
1,447,201 | + | -0.7 | |||
1,447,254 | + | +0.3 | |||
1,447,254 | + | +0.4 | |||
1,447,262 | - | -0.1 | |||
1,447,278 | - | +0.1 | |||
1,447,296 | - | +0.5 | |||
1,447,296 | - | +0.9 | |||
1,447,365 | + | tynA | b1386 | 0.12 | +0.0 |
1,447,365 | + | tynA | b1386 | 0.12 | +0.7 |
1,447,594 | + | tynA | b1386 | 0.22 | +2.0 |
1,447,887 | + | tynA | b1386 | 0.35 | +0.3 |
1,447,996 | - | tynA | b1386 | 0.39 | -0.3 |
1,448,027 | - | tynA | b1386 | 0.41 | -1.7 |
1,448,027 | - | tynA | b1386 | 0.41 | -1.2 |
Or see this region's nucleotide sequence