Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_633 and PfGW456L13_634 are separated by 293 nucleotides PfGW456L13_634 and PfGW456L13_635 are separated by 85 nucleotides
PfGW456L13_633 - Sodium-dependent phosphate transporter, at 723,684 to 725,342
_633
PfGW456L13_634 - Integral membrane protein TerC, at 725,636 to 726,403
_634
PfGW456L13_635 - Uncharacterized transporter, similarity to citrate transporter, at 726,489 to 727,796
_635
Position (kb) 725
726
727 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 724.678 kb on - strand, within PfGW456L13_633 at 724.678 kb on - strand, within PfGW456L13_633 at 724.767 kb on + strand, within PfGW456L13_633 at 724.767 kb on + strand, within PfGW456L13_633 at 724.767 kb on + strand, within PfGW456L13_633 at 724.767 kb on + strand, within PfGW456L13_633 at 724.768 kb on - strand, within PfGW456L13_633 at 724.768 kb on - strand, within PfGW456L13_633 at 724.787 kb on - strand, within PfGW456L13_633 at 725.225 kb on + strand at 725.225 kb on + strand at 725.225 kb on + strand at 725.226 kb on - strand at 725.226 kb on - strand at 725.226 kb on - strand at 725.258 kb on - strand at 725.342 kb on + strand at 725.342 kb on + strand at 725.342 kb on + strand at 725.343 kb on - strand at 725.343 kb on - strand at 725.343 kb on - strand at 725.343 kb on - strand at 725.343 kb on - strand at 725.343 kb on - strand at 725.360 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.403 kb on - strand at 725.403 kb on - strand at 725.403 kb on - strand at 725.403 kb on - strand at 725.403 kb on - strand at 725.411 kb on + strand at 725.411 kb on + strand at 725.411 kb on + strand at 725.411 kb on + strand at 725.411 kb on + strand at 725.412 kb on - strand at 725.412 kb on - strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.422 kb on + strand at 725.422 kb on + strand at 725.422 kb on + strand at 725.422 kb on + strand at 725.423 kb on - strand at 725.423 kb on - strand at 725.423 kb on - strand at 725.423 kb on - strand at 725.423 kb on - strand at 725.455 kb on + strand at 725.456 kb on - strand at 725.619 kb on + strand at 725.619 kb on + strand at 725.619 kb on + strand at 725.620 kb on - strand at 725.620 kb on - strand at 725.623 kb on + strand at 725.623 kb on + strand at 725.623 kb on + strand at 725.623 kb on + strand at 725.624 kb on - strand at 725.624 kb on - strand at 725.624 kb on - strand at 725.637 kb on + strand at 725.757 kb on + strand, within PfGW456L13_634 at 725.757 kb on + strand, within PfGW456L13_634 at 725.757 kb on + strand, within PfGW456L13_634 at 725.757 kb on + strand, within PfGW456L13_634 at 725.757 kb on + strand, within PfGW456L13_634 at 725.757 kb on + strand, within PfGW456L13_634 at 725.758 kb on - strand, within PfGW456L13_634 at 725.758 kb on - strand, within PfGW456L13_634 at 725.758 kb on - strand, within PfGW456L13_634 at 725.758 kb on - strand, within PfGW456L13_634 at 725.763 kb on + strand, within PfGW456L13_634 at 725.763 kb on + strand, within PfGW456L13_634 at 725.764 kb on - strand, within PfGW456L13_634 at 725.764 kb on - strand, within PfGW456L13_634 at 725.939 kb on + strand, within PfGW456L13_634 at 725.940 kb on - strand, within PfGW456L13_634 at 726.021 kb on + strand, within PfGW456L13_634 at 726.021 kb on + strand, within PfGW456L13_634 at 726.021 kb on + strand, within PfGW456L13_634 at 726.021 kb on + strand, within PfGW456L13_634 at 726.022 kb on - strand, within PfGW456L13_634 at 726.022 kb on - strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.088 kb on - strand, within PfGW456L13_634 at 726.088 kb on - strand, within PfGW456L13_634 at 726.088 kb on - strand, within PfGW456L13_634 at 726.088 kb on - strand, within PfGW456L13_634 at 726.158 kb on - strand, within PfGW456L13_634 at 726.170 kb on + strand, within PfGW456L13_634 at 726.173 kb on + strand, within PfGW456L13_634 at 726.173 kb on + strand, within PfGW456L13_634 at 726.174 kb on - strand, within PfGW456L13_634 at 726.326 kb on - strand, within PfGW456L13_634 at 726.326 kb on - strand, within PfGW456L13_634 at 726.407 kb on + strand at 726.407 kb on + strand at 726.407 kb on + strand at 726.407 kb on + strand at 726.407 kb on + strand at 726.407 kb on + strand at 726.407 kb on + strand at 726.407 kb on + strand at 726.407 kb on + strand at 726.407 kb on + strand at 726.408 kb on - strand at 726.408 kb on - strand at 726.408 kb on - strand at 726.408 kb on - strand at 726.426 kb on + strand at 726.427 kb on - strand at 726.490 kb on + strand at 726.490 kb on + strand at 726.490 kb on + strand at 726.491 kb on - strand at 726.491 kb on - strand at 726.491 kb on - strand at 726.491 kb on - strand at 726.492 kb on + strand at 726.492 kb on + strand at 726.492 kb on + strand at 726.492 kb on + strand at 726.492 kb on + strand at 726.492 kb on + strand at 726.492 kb on + strand at 726.492 kb on + strand at 726.492 kb on + strand at 726.492 kb on + strand at 726.492 kb on + strand at 726.492 kb on + strand at 726.492 kb on + strand at 726.492 kb on + strand at 726.492 kb on + strand at 726.493 kb on - strand at 726.493 kb on - strand at 726.493 kb on - strand at 726.493 kb on - strand at 726.493 kb on - strand at 726.493 kb on - strand at 726.493 kb on - strand at 726.493 kb on - strand at 726.493 kb on - strand at 726.493 kb on - strand at 726.493 kb on - strand at 726.540 kb on + strand at 726.541 kb on - strand at 726.541 kb on - strand at 726.541 kb on - strand at 726.548 kb on + strand at 726.548 kb on + strand at 726.548 kb on + strand at 726.548 kb on + strand at 726.549 kb on - strand at 726.549 kb on - strand at 726.549 kb on - strand at 726.549 kb on - strand at 726.549 kb on - strand at 726.625 kb on + strand, within PfGW456L13_635 at 726.625 kb on + strand, within PfGW456L13_635 at 726.625 kb on + strand, within PfGW456L13_635 at 726.625 kb on + strand, within PfGW456L13_635 at 726.625 kb on + strand, within PfGW456L13_635 at 726.625 kb on + strand, within PfGW456L13_635 at 726.626 kb on - strand, within PfGW456L13_635 at 726.626 kb on - strand, within PfGW456L13_635 at 726.626 kb on - strand, within PfGW456L13_635 at 726.626 kb on - strand, within PfGW456L13_635 at 726.702 kb on + strand, within PfGW456L13_635 at 726.703 kb on - strand, within PfGW456L13_635 at 726.704 kb on + strand, within PfGW456L13_635 at 726.704 kb on + strand, within PfGW456L13_635 at 726.704 kb on + strand, within PfGW456L13_635 at 726.704 kb on + strand, within PfGW456L13_635 at 726.704 kb on + strand, within PfGW456L13_635 at 726.705 kb on - strand, within PfGW456L13_635 at 726.710 kb on - strand, within PfGW456L13_635 at 726.732 kb on + strand, within PfGW456L13_635 at 726.732 kb on + strand, within PfGW456L13_635 at 726.732 kb on + strand, within PfGW456L13_635 at 726.751 kb on + strand, within PfGW456L13_635 at 726.751 kb on + strand, within PfGW456L13_635 at 726.792 kb on + strand, within PfGW456L13_635 at 726.792 kb on + strand, within PfGW456L13_635 at 726.793 kb on - strand, within PfGW456L13_635 at 726.817 kb on + strand, within PfGW456L13_635 at 726.817 kb on + strand, within PfGW456L13_635 at 726.905 kb on + strand, within PfGW456L13_635 at 726.991 kb on + strand, within PfGW456L13_635 at 726.991 kb on + strand, within PfGW456L13_635 at 726.991 kb on + strand, within PfGW456L13_635 at 726.991 kb on + strand, within PfGW456L13_635 at 726.991 kb on + strand, within PfGW456L13_635 at 726.992 kb on - strand, within PfGW456L13_635 at 726.992 kb on - strand, within PfGW456L13_635 at 726.992 kb on - strand, within PfGW456L13_635 at 726.992 kb on - strand, within PfGW456L13_635 at 727.213 kb on + strand, within PfGW456L13_635 at 727.213 kb on + strand, within PfGW456L13_635 at 727.213 kb on + strand, within PfGW456L13_635 at 727.213 kb on + strand, within PfGW456L13_635 at 727.214 kb on - strand, within PfGW456L13_635 at 727.214 kb on - strand, within PfGW456L13_635 at 727.214 kb on - strand, within PfGW456L13_635 at 727.219 kb on + strand, within PfGW456L13_635 at 727.219 kb on + strand, within PfGW456L13_635 at 727.219 kb on + strand, within PfGW456L13_635 at 727.219 kb on + strand, within PfGW456L13_635 at 727.220 kb on - strand, within PfGW456L13_635 at 727.220 kb on - strand, within PfGW456L13_635 at 727.220 kb on - strand, within PfGW456L13_635
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 724,678 - PfGW456L13_633 0.60 +0.8 724,678 - PfGW456L13_633 0.60 +1.1 724,767 + PfGW456L13_633 0.65 +0.0 724,767 + PfGW456L13_633 0.65 -1.4 724,767 + PfGW456L13_633 0.65 -0.5 724,767 + PfGW456L13_633 0.65 -0.1 724,768 - PfGW456L13_633 0.65 -2.8 724,768 - PfGW456L13_633 0.65 -1.7 724,787 - PfGW456L13_633 0.66 -0.5 725,225 + +0.7 725,225 + +2.7 725,225 + +0.1 725,226 - +0.6 725,226 - +0.3 725,226 - -0.4 725,258 - +0.6 725,342 + -1.8 725,342 + -0.8 725,342 + -2.0 725,343 - +0.8 725,343 - -0.4 725,343 - +0.7 725,343 - -3.0 725,343 - -0.7 725,343 - -3.4 725,360 + +0.2 725,402 + -3.2 725,402 + +1.9 725,402 + +1.2 725,402 + -0.3 725,402 + -0.4 725,402 + +0.8 725,402 + -0.1 725,402 + -1.3 725,402 + -2.6 725,402 + -1.1 725,402 + -2.2 725,402 + -0.5 725,403 - +0.3 725,403 - +0.7 725,403 - +0.9 725,403 - +1.7 725,403 - +1.5 725,411 + -2.1 725,411 + +0.4 725,411 + +0.8 725,411 + -3.6 725,411 + +1.7 725,412 - +0.5 725,412 - -2.4 725,415 + +2.0 725,415 + -0.2 725,415 + -1.5 725,415 + -1.2 725,415 + -3.2 725,415 + -3.3 725,415 + -0.7 725,415 + -0.5 725,415 + +0.5 725,415 + +0.1 725,415 + -0.9 725,416 - +0.1 725,416 - -0.1 725,416 - +1.9 725,416 - +2.8 725,416 - +0.3 725,416 - +1.0 725,416 - -1.8 725,416 - +1.0 725,416 - +0.3 725,416 - +1.3 725,416 - -0.3 725,416 - +0.5 725,416 - +0.6 725,422 + +2.2 725,422 + -0.3 725,422 + -0.4 725,422 + -1.1 725,423 - -2.1 725,423 - +0.1 725,423 - -0.6 725,423 - -3.2 725,423 - -3.4 725,455 + +1.1 725,456 - -0.8 725,619 + -0.3 725,619 + -0.5 725,619 + +1.6 725,620 - -0.5 725,620 - +1.1 725,623 + +0.6 725,623 + -0.4 725,623 + +1.8 725,623 + +1.5 725,624 - +0.3 725,624 - +1.5 725,624 - -0.4 725,637 + +1.1 725,757 + PfGW456L13_634 0.16 -4.9 725,757 + PfGW456L13_634 0.16 -0.3 725,757 + PfGW456L13_634 0.16 -2.7 725,757 + PfGW456L13_634 0.16 +1.6 725,757 + PfGW456L13_634 0.16 -1.1 725,757 + PfGW456L13_634 0.16 -2.5 725,758 - PfGW456L13_634 0.16 +1.1 725,758 - PfGW456L13_634 0.16 -2.1 725,758 - PfGW456L13_634 0.16 -2.5 725,758 - PfGW456L13_634 0.16 -0.8 725,763 + PfGW456L13_634 0.17 +0.1 725,763 + PfGW456L13_634 0.17 -3.1 725,764 - PfGW456L13_634 0.17 -3.2 725,764 - PfGW456L13_634 0.17 -3.8 725,939 + PfGW456L13_634 0.39 -3.0 725,940 - PfGW456L13_634 0.40 -2.9 726,021 + PfGW456L13_634 0.50 -3.9 726,021 + PfGW456L13_634 0.50 -1.4 726,021 + PfGW456L13_634 0.50 -0.7 726,021 + PfGW456L13_634 0.50 -0.7 726,022 - PfGW456L13_634 0.50 -3.6 726,022 - PfGW456L13_634 0.50 -0.5 726,087 + PfGW456L13_634 0.59 +0.1 726,087 + PfGW456L13_634 0.59 -3.7 726,087 + PfGW456L13_634 0.59 -2.3 726,087 + PfGW456L13_634 0.59 -3.0 726,087 + PfGW456L13_634 0.59 -3.5 726,087 + PfGW456L13_634 0.59 +0.1 726,087 + PfGW456L13_634 0.59 -4.9 726,087 + PfGW456L13_634 0.59 -2.3 726,087 + PfGW456L13_634 0.59 -0.9 726,087 + PfGW456L13_634 0.59 -1.8 726,087 + PfGW456L13_634 0.59 -1.9 726,087 + PfGW456L13_634 0.59 -0.4 726,087 + PfGW456L13_634 0.59 +0.2 726,087 + PfGW456L13_634 0.59 -3.1 726,087 + PfGW456L13_634 0.59 -0.5 726,088 - PfGW456L13_634 0.59 -0.3 726,088 - PfGW456L13_634 0.59 -1.4 726,088 - PfGW456L13_634 0.59 -1.9 726,088 - PfGW456L13_634 0.59 -1.0 726,158 - PfGW456L13_634 0.68 +0.9 726,170 + PfGW456L13_634 0.70 -1.0 726,173 + PfGW456L13_634 0.70 -2.9 726,173 + PfGW456L13_634 0.70 -4.1 726,174 - PfGW456L13_634 0.70 -1.1 726,326 - PfGW456L13_634 0.90 -2.4 726,326 - PfGW456L13_634 0.90 -1.0 726,407 + -0.4 726,407 + -2.4 726,407 + -0.4 726,407 + -3.3 726,407 + -2.7 726,407 + -0.4 726,407 + -1.0 726,407 + -3.1 726,407 + -0.1 726,407 + -1.7 726,408 - -0.5 726,408 - -3.7 726,408 - -1.0 726,408 - -1.3 726,426 + -1.2 726,427 - -3.5 726,490 + -2.1 726,490 + -3.8 726,490 + -2.1 726,491 - -0.3 726,491 - +0.1 726,491 - -3.5 726,491 - +1.8 726,492 + -2.7 726,492 + -2.5 726,492 + -1.5 726,492 + -4.1 726,492 + -4.1 726,492 + -1.5 726,492 + -2.9 726,492 + -3.7 726,492 + -2.1 726,492 + -2.8 726,492 + -4.2 726,492 + +1.5 726,492 + -3.1 726,492 + -3.8 726,492 + -2.1 726,493 - -2.7 726,493 - -0.8 726,493 - +0.9 726,493 - -0.6 726,493 - -1.7 726,493 - -0.1 726,493 - -0.7 726,493 - +1.2 726,493 - -0.9 726,493 - +0.6 726,493 - +0.3 726,540 + -2.9 726,541 - -0.8 726,541 - -0.6 726,541 - -2.0 726,548 + -2.2 726,548 + -4.7 726,548 + -3.5 726,548 + -3.1 726,549 - -1.6 726,549 - -2.9 726,549 - -0.8 726,549 - -0.6 726,549 - -2.9 726,625 + PfGW456L13_635 0.10 -1.7 726,625 + PfGW456L13_635 0.10 -0.7 726,625 + PfGW456L13_635 0.10 -1.8 726,625 + PfGW456L13_635 0.10 -2.2 726,625 + PfGW456L13_635 0.10 -1.7 726,625 + PfGW456L13_635 0.10 -2.4 726,626 - PfGW456L13_635 0.10 -2.9 726,626 - PfGW456L13_635 0.10 -1.3 726,626 - PfGW456L13_635 0.10 -1.6 726,626 - PfGW456L13_635 0.10 -2.2 726,702 + PfGW456L13_635 0.16 -2.4 726,703 - PfGW456L13_635 0.16 -1.6 726,704 + PfGW456L13_635 0.16 -1.8 726,704 + PfGW456L13_635 0.16 -1.7 726,704 + PfGW456L13_635 0.16 -1.8 726,704 + PfGW456L13_635 0.16 -2.4 726,704 + PfGW456L13_635 0.16 -4.0 726,705 - PfGW456L13_635 0.17 -0.7 726,710 - PfGW456L13_635 0.17 -1.5 726,732 + PfGW456L13_635 0.19 -0.4 726,732 + PfGW456L13_635 0.19 -2.1 726,732 + PfGW456L13_635 0.19 -2.0 726,751 + PfGW456L13_635 0.20 -1.8 726,751 + PfGW456L13_635 0.20 -3.0 726,792 + PfGW456L13_635 0.23 -3.0 726,792 + PfGW456L13_635 0.23 -3.0 726,793 - PfGW456L13_635 0.23 -2.5 726,817 + PfGW456L13_635 0.25 -1.8 726,817 + PfGW456L13_635 0.25 -2.1 726,905 + PfGW456L13_635 0.32 +0.4 726,991 + PfGW456L13_635 0.38 -1.5 726,991 + PfGW456L13_635 0.38 -2.0 726,991 + PfGW456L13_635 0.38 -1.8 726,991 + PfGW456L13_635 0.38 -2.1 726,991 + PfGW456L13_635 0.38 -0.8 726,992 - PfGW456L13_635 0.38 -0.9 726,992 - PfGW456L13_635 0.38 -2.2 726,992 - PfGW456L13_635 0.38 -3.2 726,992 - PfGW456L13_635 0.38 -2.3 727,213 + PfGW456L13_635 0.55 -1.3 727,213 + PfGW456L13_635 0.55 +0.3 727,213 + PfGW456L13_635 0.55 -2.1 727,213 + PfGW456L13_635 0.55 -3.2 727,214 - PfGW456L13_635 0.55 -1.5 727,214 - PfGW456L13_635 0.55 -1.5 727,214 - PfGW456L13_635 0.55 +0.6 727,219 + PfGW456L13_635 0.56 -3.2 727,219 + PfGW456L13_635 0.56 +0.8 727,219 + PfGW456L13_635 0.56 -3.5 727,219 + PfGW456L13_635 0.56 -1.3 727,220 - PfGW456L13_635 0.56 -0.3 727,220 - PfGW456L13_635 0.56 -0.6 727,220 - PfGW456L13_635 0.56 -1.7
Or see this region's nucleotide sequence