Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_632 and PfGW456L13_633 are separated by 56 nucleotides PfGW456L13_633 and PfGW456L13_634 are separated by 293 nucleotides
PfGW456L13_632 - Metalloprotease, insulinase family, at 722,251 to 723,627
_632
PfGW456L13_633 - Sodium-dependent phosphate transporter, at 723,684 to 725,342
_633
PfGW456L13_634 - Integral membrane protein TerC, at 725,636 to 726,403
_634
Position (kb) 723
724
725
726 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 722.711 kb on + strand, within PfGW456L13_632 at 722.734 kb on + strand, within PfGW456L13_632 at 722.734 kb on + strand, within PfGW456L13_632 at 722.735 kb on - strand, within PfGW456L13_632 at 722.735 kb on - strand, within PfGW456L13_632 at 722.735 kb on - strand, within PfGW456L13_632 at 722.735 kb on - strand, within PfGW456L13_632 at 722.762 kb on + strand, within PfGW456L13_632 at 722.762 kb on + strand, within PfGW456L13_632 at 722.762 kb on + strand, within PfGW456L13_632 at 722.763 kb on - strand, within PfGW456L13_632 at 722.763 kb on - strand, within PfGW456L13_632 at 722.807 kb on - strand, within PfGW456L13_632 at 722.945 kb on + strand, within PfGW456L13_632 at 722.961 kb on - strand, within PfGW456L13_632 at 722.961 kb on - strand, within PfGW456L13_632 at 723.020 kb on + strand, within PfGW456L13_632 at 723.171 kb on - strand, within PfGW456L13_632 at 723.171 kb on - strand, within PfGW456L13_632 at 723.213 kb on + strand, within PfGW456L13_632 at 723.213 kb on + strand, within PfGW456L13_632 at 723.214 kb on - strand, within PfGW456L13_632 at 723.548 kb on + strand at 723.549 kb on - strand at 723.595 kb on + strand at 723.595 kb on + strand at 723.595 kb on + strand at 723.595 kb on + strand at 723.595 kb on + strand at 723.595 kb on + strand at 723.595 kb on + strand at 723.596 kb on - strand at 723.596 kb on - strand at 723.596 kb on - strand at 723.596 kb on - strand at 723.596 kb on - strand at 723.651 kb on + strand at 723.651 kb on + strand at 723.651 kb on + strand at 723.652 kb on - strand at 723.652 kb on - strand at 723.652 kb on - strand at 723.652 kb on - strand at 723.758 kb on - strand at 723.758 kb on - strand at 723.758 kb on - strand at 723.758 kb on - strand at 723.782 kb on + strand at 723.782 kb on + strand at 723.783 kb on - strand at 723.783 kb on - strand at 723.783 kb on - strand at 723.783 kb on - strand at 723.834 kb on - strand at 723.848 kb on + strand at 723.848 kb on + strand at 723.848 kb on + strand at 723.848 kb on + strand at 723.848 kb on + strand at 723.849 kb on - strand at 723.849 kb on - strand at 723.849 kb on - strand at 723.849 kb on - strand at 724.189 kb on + strand, within PfGW456L13_633 at 724.189 kb on + strand, within PfGW456L13_633 at 724.189 kb on + strand, within PfGW456L13_633 at 724.189 kb on + strand, within PfGW456L13_633 at 724.189 kb on + strand, within PfGW456L13_633 at 724.189 kb on + strand, within PfGW456L13_633 at 724.190 kb on - strand, within PfGW456L13_633 at 724.190 kb on - strand, within PfGW456L13_633 at 724.190 kb on - strand at 724.207 kb on + strand, within PfGW456L13_633 at 724.207 kb on + strand, within PfGW456L13_633 at 724.498 kb on + strand, within PfGW456L13_633 at 724.498 kb on + strand, within PfGW456L13_633 at 724.498 kb on + strand, within PfGW456L13_633 at 724.499 kb on - strand, within PfGW456L13_633 at 724.499 kb on - strand, within PfGW456L13_633 at 724.499 kb on - strand, within PfGW456L13_633 at 724.499 kb on - strand, within PfGW456L13_633 at 724.590 kb on + strand, within PfGW456L13_633 at 724.591 kb on - strand, within PfGW456L13_633 at 724.591 kb on - strand, within PfGW456L13_633 at 724.591 kb on - strand, within PfGW456L13_633 at 724.591 kb on - strand, within PfGW456L13_633 at 724.609 kb on + strand, within PfGW456L13_633 at 724.609 kb on + strand, within PfGW456L13_633 at 724.610 kb on - strand, within PfGW456L13_633 at 724.610 kb on - strand, within PfGW456L13_633 at 724.610 kb on - strand, within PfGW456L13_633 at 724.678 kb on - strand, within PfGW456L13_633 at 724.678 kb on - strand, within PfGW456L13_633 at 724.767 kb on + strand, within PfGW456L13_633 at 724.767 kb on + strand, within PfGW456L13_633 at 724.767 kb on + strand, within PfGW456L13_633 at 724.767 kb on + strand, within PfGW456L13_633 at 724.768 kb on - strand, within PfGW456L13_633 at 724.768 kb on - strand, within PfGW456L13_633 at 724.787 kb on - strand, within PfGW456L13_633 at 725.225 kb on + strand at 725.225 kb on + strand at 725.225 kb on + strand at 725.226 kb on - strand at 725.226 kb on - strand at 725.226 kb on - strand at 725.258 kb on - strand at 725.342 kb on + strand at 725.342 kb on + strand at 725.342 kb on + strand at 725.343 kb on - strand at 725.343 kb on - strand at 725.343 kb on - strand at 725.343 kb on - strand at 725.343 kb on - strand at 725.343 kb on - strand at 725.360 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.402 kb on + strand at 725.403 kb on - strand at 725.403 kb on - strand at 725.403 kb on - strand at 725.403 kb on - strand at 725.403 kb on - strand at 725.411 kb on + strand at 725.411 kb on + strand at 725.411 kb on + strand at 725.411 kb on + strand at 725.411 kb on + strand at 725.412 kb on - strand at 725.412 kb on - strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.415 kb on + strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.416 kb on - strand at 725.422 kb on + strand at 725.422 kb on + strand at 725.422 kb on + strand at 725.422 kb on + strand at 725.423 kb on - strand at 725.423 kb on - strand at 725.423 kb on - strand at 725.423 kb on - strand at 725.423 kb on - strand at 725.455 kb on + strand at 725.456 kb on - strand at 725.619 kb on + strand at 725.619 kb on + strand at 725.619 kb on + strand at 725.620 kb on - strand at 725.620 kb on - strand at 725.623 kb on + strand at 725.623 kb on + strand at 725.623 kb on + strand at 725.623 kb on + strand at 725.624 kb on - strand at 725.624 kb on - strand at 725.624 kb on - strand at 725.637 kb on + strand at 725.757 kb on + strand, within PfGW456L13_634 at 725.757 kb on + strand, within PfGW456L13_634 at 725.757 kb on + strand, within PfGW456L13_634 at 725.757 kb on + strand, within PfGW456L13_634 at 725.757 kb on + strand, within PfGW456L13_634 at 725.757 kb on + strand, within PfGW456L13_634 at 725.758 kb on - strand, within PfGW456L13_634 at 725.758 kb on - strand, within PfGW456L13_634 at 725.758 kb on - strand, within PfGW456L13_634 at 725.758 kb on - strand, within PfGW456L13_634 at 725.763 kb on + strand, within PfGW456L13_634 at 725.763 kb on + strand, within PfGW456L13_634 at 725.764 kb on - strand, within PfGW456L13_634 at 725.764 kb on - strand, within PfGW456L13_634 at 725.939 kb on + strand, within PfGW456L13_634 at 725.940 kb on - strand, within PfGW456L13_634 at 726.021 kb on + strand, within PfGW456L13_634 at 726.021 kb on + strand, within PfGW456L13_634 at 726.021 kb on + strand, within PfGW456L13_634 at 726.021 kb on + strand, within PfGW456L13_634 at 726.022 kb on - strand, within PfGW456L13_634 at 726.022 kb on - strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.087 kb on + strand, within PfGW456L13_634 at 726.088 kb on - strand, within PfGW456L13_634 at 726.088 kb on - strand, within PfGW456L13_634 at 726.088 kb on - strand, within PfGW456L13_634 at 726.088 kb on - strand, within PfGW456L13_634 at 726.158 kb on - strand, within PfGW456L13_634 at 726.170 kb on + strand, within PfGW456L13_634 at 726.173 kb on + strand, within PfGW456L13_634 at 726.173 kb on + strand, within PfGW456L13_634 at 726.174 kb on - strand, within PfGW456L13_634 at 726.326 kb on - strand, within PfGW456L13_634 at 726.326 kb on - strand, within PfGW456L13_634
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 722,711 + PfGW456L13_632 0.33 -3.0 722,734 + PfGW456L13_632 0.35 +1.5 722,734 + PfGW456L13_632 0.35 -4.4 722,735 - PfGW456L13_632 0.35 -2.1 722,735 - PfGW456L13_632 0.35 -1.7 722,735 - PfGW456L13_632 0.35 -1.3 722,735 - PfGW456L13_632 0.35 -2.0 722,762 + PfGW456L13_632 0.37 +1.4 722,762 + PfGW456L13_632 0.37 -3.8 722,762 + PfGW456L13_632 0.37 +0.4 722,763 - PfGW456L13_632 0.37 -1.3 722,763 - PfGW456L13_632 0.37 -2.8 722,807 - PfGW456L13_632 0.40 -2.7 722,945 + PfGW456L13_632 0.50 -0.6 722,961 - PfGW456L13_632 0.52 +1.0 722,961 - PfGW456L13_632 0.52 +0.1 723,020 + PfGW456L13_632 0.56 +1.0 723,171 - PfGW456L13_632 0.67 -1.2 723,171 - PfGW456L13_632 0.67 +0.1 723,213 + PfGW456L13_632 0.70 -3.4 723,213 + PfGW456L13_632 0.70 +0.5 723,214 - PfGW456L13_632 0.70 -0.7 723,548 + +1.8 723,549 - -0.3 723,595 + -0.8 723,595 + +0.8 723,595 + -0.6 723,595 + -2.2 723,595 + +1.3 723,595 + -0.4 723,595 + -2.5 723,596 - +0.8 723,596 - +0.5 723,596 - +0.9 723,596 - -0.9 723,596 - +1.4 723,651 + +1.5 723,651 + -3.9 723,651 + -1.3 723,652 - -0.9 723,652 - +0.9 723,652 - -3.3 723,652 - +0.5 723,758 - -1.8 723,758 - -0.0 723,758 - -2.6 723,758 - -3.8 723,782 + +0.7 723,782 + +1.8 723,783 - +2.2 723,783 - +1.6 723,783 - -1.0 723,783 - +1.8 723,834 - -1.5 723,848 + -0.8 723,848 + +0.7 723,848 + -0.0 723,848 + -1.9 723,848 + -1.9 723,849 - -2.3 723,849 - +1.0 723,849 - -1.8 723,849 - -3.0 724,189 + PfGW456L13_633 0.30 +0.9 724,189 + PfGW456L13_633 0.30 +0.9 724,189 + PfGW456L13_633 0.30 +1.5 724,189 + PfGW456L13_633 0.30 +0.8 724,189 + PfGW456L13_633 0.30 +1.3 724,189 + PfGW456L13_633 0.30 -0.9 724,190 - PfGW456L13_633 0.31 -4.1 724,190 - PfGW456L13_633 0.31 -3.2 724,190 - +0.7 724,207 + PfGW456L13_633 0.32 +0.3 724,207 + PfGW456L13_633 0.32 +1.1 724,498 + PfGW456L13_633 0.49 +2.7 724,498 + PfGW456L13_633 0.49 +2.1 724,498 + PfGW456L13_633 0.49 +1.2 724,499 - PfGW456L13_633 0.49 +1.0 724,499 - PfGW456L13_633 0.49 +2.3 724,499 - PfGW456L13_633 0.49 +0.4 724,499 - PfGW456L13_633 0.49 -1.1 724,590 + PfGW456L13_633 0.55 +0.0 724,591 - PfGW456L13_633 0.55 -1.3 724,591 - PfGW456L13_633 0.55 +1.4 724,591 - PfGW456L13_633 0.55 +1.2 724,591 - PfGW456L13_633 0.55 -1.0 724,609 + PfGW456L13_633 0.56 -4.1 724,609 + PfGW456L13_633 0.56 +0.7 724,610 - PfGW456L13_633 0.56 +1.3 724,610 - PfGW456L13_633 0.56 +1.1 724,610 - PfGW456L13_633 0.56 -1.6 724,678 - PfGW456L13_633 0.60 +0.8 724,678 - PfGW456L13_633 0.60 +1.1 724,767 + PfGW456L13_633 0.65 +0.0 724,767 + PfGW456L13_633 0.65 -1.4 724,767 + PfGW456L13_633 0.65 -0.5 724,767 + PfGW456L13_633 0.65 -0.1 724,768 - PfGW456L13_633 0.65 -2.8 724,768 - PfGW456L13_633 0.65 -1.7 724,787 - PfGW456L13_633 0.66 -0.5 725,225 + +0.7 725,225 + +2.7 725,225 + +0.1 725,226 - +0.6 725,226 - +0.3 725,226 - -0.4 725,258 - +0.6 725,342 + -1.8 725,342 + -0.8 725,342 + -2.0 725,343 - +0.8 725,343 - -0.4 725,343 - +0.7 725,343 - -3.0 725,343 - -0.7 725,343 - -3.4 725,360 + +0.2 725,402 + -3.2 725,402 + +1.9 725,402 + +1.2 725,402 + -0.3 725,402 + -0.4 725,402 + +0.8 725,402 + -0.1 725,402 + -1.3 725,402 + -2.6 725,402 + -1.1 725,402 + -2.2 725,402 + -0.5 725,403 - +0.3 725,403 - +0.7 725,403 - +0.9 725,403 - +1.7 725,403 - +1.5 725,411 + -2.1 725,411 + +0.4 725,411 + +0.8 725,411 + -3.6 725,411 + +1.7 725,412 - +0.5 725,412 - -2.4 725,415 + +2.0 725,415 + -0.2 725,415 + -1.5 725,415 + -1.2 725,415 + -3.2 725,415 + -3.3 725,415 + -0.7 725,415 + -0.5 725,415 + +0.5 725,415 + +0.1 725,415 + -0.9 725,416 - +0.1 725,416 - -0.1 725,416 - +1.9 725,416 - +2.8 725,416 - +0.3 725,416 - +1.0 725,416 - -1.8 725,416 - +1.0 725,416 - +0.3 725,416 - +1.3 725,416 - -0.3 725,416 - +0.5 725,416 - +0.6 725,422 + +2.2 725,422 + -0.3 725,422 + -0.4 725,422 + -1.1 725,423 - -2.1 725,423 - +0.1 725,423 - -0.6 725,423 - -3.2 725,423 - -3.4 725,455 + +1.1 725,456 - -0.8 725,619 + -0.3 725,619 + -0.5 725,619 + +1.6 725,620 - -0.5 725,620 - +1.1 725,623 + +0.6 725,623 + -0.4 725,623 + +1.8 725,623 + +1.5 725,624 - +0.3 725,624 - +1.5 725,624 - -0.4 725,637 + +1.1 725,757 + PfGW456L13_634 0.16 -4.9 725,757 + PfGW456L13_634 0.16 -0.3 725,757 + PfGW456L13_634 0.16 -2.7 725,757 + PfGW456L13_634 0.16 +1.6 725,757 + PfGW456L13_634 0.16 -1.1 725,757 + PfGW456L13_634 0.16 -2.5 725,758 - PfGW456L13_634 0.16 +1.1 725,758 - PfGW456L13_634 0.16 -2.1 725,758 - PfGW456L13_634 0.16 -2.5 725,758 - PfGW456L13_634 0.16 -0.8 725,763 + PfGW456L13_634 0.17 +0.1 725,763 + PfGW456L13_634 0.17 -3.1 725,764 - PfGW456L13_634 0.17 -3.2 725,764 - PfGW456L13_634 0.17 -3.8 725,939 + PfGW456L13_634 0.39 -3.0 725,940 - PfGW456L13_634 0.40 -2.9 726,021 + PfGW456L13_634 0.50 -3.9 726,021 + PfGW456L13_634 0.50 -1.4 726,021 + PfGW456L13_634 0.50 -0.7 726,021 + PfGW456L13_634 0.50 -0.7 726,022 - PfGW456L13_634 0.50 -3.6 726,022 - PfGW456L13_634 0.50 -0.5 726,087 + PfGW456L13_634 0.59 +0.1 726,087 + PfGW456L13_634 0.59 -3.7 726,087 + PfGW456L13_634 0.59 -2.3 726,087 + PfGW456L13_634 0.59 -3.0 726,087 + PfGW456L13_634 0.59 -3.5 726,087 + PfGW456L13_634 0.59 +0.1 726,087 + PfGW456L13_634 0.59 -4.9 726,087 + PfGW456L13_634 0.59 -2.3 726,087 + PfGW456L13_634 0.59 -0.9 726,087 + PfGW456L13_634 0.59 -1.8 726,087 + PfGW456L13_634 0.59 -1.9 726,087 + PfGW456L13_634 0.59 -0.4 726,087 + PfGW456L13_634 0.59 +0.2 726,087 + PfGW456L13_634 0.59 -3.1 726,087 + PfGW456L13_634 0.59 -0.5 726,088 - PfGW456L13_634 0.59 -0.3 726,088 - PfGW456L13_634 0.59 -1.4 726,088 - PfGW456L13_634 0.59 -1.9 726,088 - PfGW456L13_634 0.59 -1.0 726,158 - PfGW456L13_634 0.68 +0.9 726,170 + PfGW456L13_634 0.70 -1.0 726,173 + PfGW456L13_634 0.70 -2.9 726,173 + PfGW456L13_634 0.70 -4.1 726,174 - PfGW456L13_634 0.70 -1.1 726,326 - PfGW456L13_634 0.90 -2.4 726,326 - PfGW456L13_634 0.90 -1.0
Or see this region's nucleotide sequence