Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4905

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
5,479,972	-		PfGW456L13_4904	0.20	+0.8
5,480,175	+		PfGW456L13_4904	0.41	+0.3
5,480,175	+		PfGW456L13_4904	0.41	+1.0
5,480,175	+		PfGW456L13_4904	0.41	+1.1
5,480,175	+		PfGW456L13_4904	0.41	-0.3
5,480,176	-		PfGW456L13_4904	0.41	-0.5
5,480,185	+		PfGW456L13_4904	0.42	-0.8
5,480,186	-		PfGW456L13_4904	0.42	-1.6
5,480,186	-		PfGW456L13_4904	0.42	-4.0
5,480,344	-		PfGW456L13_4904	0.58	-2.7
5,480,361	+		PfGW456L13_4904	0.60	-0.7
5,480,361	+		PfGW456L13_4904	0.60	+1.8
5,480,361	+		PfGW456L13_4904	0.60	+1.5
5,480,362	-		PfGW456L13_4904	0.60	-0.1
5,480,362	-		PfGW456L13_4904	0.60	+0.7
5,480,362	-		PfGW456L13_4904	0.60	+2.5
5,480,494	+		PfGW456L13_4904	0.74	-4.0
5,480,496	+		PfGW456L13_4904	0.74	+0.1
5,480,496	+		PfGW456L13_4904	0.74	-0.3
5,480,496	+		PfGW456L13_4904	0.74	+0.4
5,480,496	+		PfGW456L13_4904	0.74	-0.4
5,480,497	-		PfGW456L13_4904	0.74	-0.8
5,480,497	-		PfGW456L13_4904	0.74	+1.5
5,480,603	-		PfGW456L13_4904	0.85	+1.1
5,480,603	-		PfGW456L13_4904	0.85	+0.7
5,480,603	-		PfGW456L13_4904	0.85	+0.2
5,480,603	-		PfGW456L13_4904	0.85	+0.7
5,480,616	+		PfGW456L13_4904	0.86	-2.2
5,480,616	+		PfGW456L13_4904	0.86	+0.0
5,480,616	+		PfGW456L13_4904	0.86	-1.0
5,480,617	-		PfGW456L13_4904	0.86	-3.1
5,480,628	+		PfGW456L13_4904	0.87	+0.7
5,480,628	+		PfGW456L13_4904	0.87	-3.5
5,480,628	+		PfGW456L13_4904	0.87	+0.5
5,480,628	+		PfGW456L13_4904	0.87	-3.0
5,480,629	-		PfGW456L13_4904	0.87	-0.3
5,480,629	-		PfGW456L13_4904	0.87	+0.5
5,480,629	-		PfGW456L13_4904	0.87	-3.4
5,480,700	+				-0.1
5,480,700	+				-0.1
5,480,705	+				+0.7
5,480,705	+				+0.9
5,480,705	+				-3.5
5,480,705	+				-1.8
5,480,705	+				+0.4
5,480,705	+				-3.2
5,480,759	+				-2.2
5,480,776	+				+1.4
5,480,813	+				+1.9
5,480,814	-				-2.4
5,480,814	-				-2.1
5,480,893	-				-2.7
5,480,918	-				-0.7
5,481,225	+		PfGW456L13_4905	0.14	+0.5
5,481,225	+		PfGW456L13_4905	0.14	-2.1
5,481,225	+		PfGW456L13_4905	0.14	-0.4
5,481,226	-		PfGW456L13_4905	0.14	+0.6
5,481,285	+		PfGW456L13_4905	0.17	-0.0
5,481,469	-		PfGW456L13_4905	0.27	-0.2
5,481,583	-		PfGW456L13_4905	0.33	-2.2
5,481,583	-		PfGW456L13_4905	0.33	-0.5
5,481,583	-		PfGW456L13_4905	0.33	-1.7
5,481,600	+		PfGW456L13_4905	0.33	+0.7
5,481,601	-		PfGW456L13_4905	0.33	+0.6
5,481,601	-		PfGW456L13_4905	0.33	+0.3
5,481,603	+		PfGW456L13_4905	0.34	+0.9
5,481,604	-				+0.3
5,481,744	+		PfGW456L13_4905	0.41	-1.8
5,481,744	+		PfGW456L13_4905	0.41	-2.1
5,481,744	+		PfGW456L13_4905	0.41	+0.0
5,481,744	+		PfGW456L13_4905	0.41	+0.7
5,481,744	+		PfGW456L13_4905	0.41	+1.2
5,481,745	-		PfGW456L13_4905	0.41	+1.1
5,481,745	-		PfGW456L13_4905	0.41	+1.2
5,481,745	-		PfGW456L13_4905	0.41	-0.9
5,481,745	-		PfGW456L13_4905	0.41	-0.1
5,481,745	-		PfGW456L13_4905	0.41	+0.1
5,481,745	-		PfGW456L13_4905	0.41	-3.9
5,481,745	-		PfGW456L13_4905	0.41	-0.4
5,481,745	-		PfGW456L13_4905	0.41	-0.3
5,481,745	-		PfGW456L13_4905	0.41	-0.1
5,482,023	+		PfGW456L13_4905	0.55	-1.2
5,482,023	+		PfGW456L13_4905	0.55	-0.6
5,482,023	+		PfGW456L13_4905	0.55	-0.2
5,482,023	+		PfGW456L13_4905	0.55	+1.5
5,482,023	+		PfGW456L13_4905	0.55	-2.3
5,482,023	+		PfGW456L13_4905	0.55	-0.2
5,482,023	+		PfGW456L13_4905	0.55	+0.5
5,482,023	+		PfGW456L13_4905	0.55	+1.5
5,482,024	-		PfGW456L13_4905	0.55	-1.0
5,482,024	-		PfGW456L13_4905	0.55	+1.3
5,482,024	-		PfGW456L13_4905	0.55	-0.3
5,482,024	-		PfGW456L13_4905	0.55	-2.5
5,482,024	-		PfGW456L13_4905	0.55	-2.1
5,482,024	-		PfGW456L13_4905	0.55	-0.7
5,482,024	-		PfGW456L13_4905	0.55	+1.0
5,482,024	-		PfGW456L13_4905	0.55	-1.2
5,482,024	-		PfGW456L13_4905	0.55	-2.2
5,482,024	-		PfGW456L13_4905	0.55	-0.3
5,482,024	-		PfGW456L13_4905	0.55	-1.0
5,482,179	+		PfGW456L13_4905	0.63	+0.8
5,482,179	+		PfGW456L13_4905	0.63	-0.2
5,482,179	+		PfGW456L13_4905	0.63	-1.7
5,482,179	+		PfGW456L13_4905	0.63	+0.2
5,482,179	+		PfGW456L13_4905	0.63	-1.0
5,482,180	-		PfGW456L13_4905	0.64	+0.3
5,482,180	-		PfGW456L13_4905	0.64	+0.9
5,482,180	-		PfGW456L13_4905	0.64	+1.4
5,482,180	-		PfGW456L13_4905	0.64	-3.0
5,482,180	-		PfGW456L13_4905	0.64	+1.9
5,482,180	-		PfGW456L13_4905	0.64	-0.3
5,482,180	-		PfGW456L13_4905	0.64	+0.7
5,482,387	+		PfGW456L13_4905	0.74	+0.5
5,482,500	+		PfGW456L13_4905	0.80	-2.7
5,482,500	+		PfGW456L13_4905	0.80	-1.8
5,482,500	+		PfGW456L13_4905	0.80	-1.5
5,482,500	+		PfGW456L13_4905	0.80	-0.3
5,482,500	+		PfGW456L13_4905	0.80	+0.5
5,482,500	+		PfGW456L13_4905	0.80	+0.4
5,482,501	-		PfGW456L13_4905	0.80	+0.8
5,482,501	-		PfGW456L13_4905	0.80	+0.0
5,482,501	-		PfGW456L13_4905	0.80	+0.9
5,482,501	-		PfGW456L13_4905	0.80	-3.0
5,482,527	+		PfGW456L13_4905	0.82	-1.1
5,482,527	+		PfGW456L13_4905	0.82	-1.3
5,482,528	-		PfGW456L13_4905	0.82	-2.3
5,482,539	+		PfGW456L13_4905	0.82	-3.5
5,482,662	+		PfGW456L13_4905	0.89	+1.3
5,482,757	-				+0.9
5,482,785	+				+1.3
5,482,785	+				+0.2
5,482,786	-				-2.6
5,482,786	-				+0.1
5,482,786	-				+0.9
5,482,786	-				+0.5
5,482,786	-				+0.2
5,482,818	+				+1.1
5,482,818	+				+2.0
5,482,818	+				+0.5
5,482,818	+				+1.4
5,482,818	+				+2.1
5,482,818	+				+0.7
5,482,818	+				-0.5
5,482,818	+				-3.1
5,482,819	-				+1.1
5,482,819	-				+1.6
5,482,819	-				+0.9
5,482,819	-				-0.9
5,482,819	-				+0.7
5,482,819	-				+1.4
5,482,819	-				+1.0
5,482,819	-				+1.7
5,482,819	-				-2.9
5,482,975	+				+1.0
5,482,976	-				+1.3
5,482,976	-				+2.6
5,483,036	-				+0.3
5,483,037	+				-3.0
5,483,037	+				+0.3
5,483,037	+				+0.1
5,483,037	+				-2.4
5,483,037	+				+0.4
5,483,038	-				-0.3
5,483,038	-				+1.2
5,483,038	-				+0.6
5,483,038	-				-1.9
5,483,092	-				-1.2
5,483,131	+				+2.3
5,483,132	-				+1.3
5,483,132	-				+1.2
5,483,164	-				+1.8
5,483,164	-				-3.7
5,483,164	-				-3.5
5,483,213	+		PfGW456L13_4906	0.10	-1.1
5,483,214	-		PfGW456L13_4906	0.10	-2.2
5,483,214	-		PfGW456L13_4906	0.10	+1.6
5,483,222	+		PfGW456L13_4906	0.11	-2.5
5,483,223	-		PfGW456L13_4906	0.11	+0.3
5,483,223	-		PfGW456L13_4906	0.11	+0.5
5,483,223	-		PfGW456L13_4906	0.11	+0.7
5,483,223	-		PfGW456L13_4906	0.11	+0.2
5,483,223	-		PfGW456L13_4906	0.11	-1.3
5,483,223	-		PfGW456L13_4906	0.11	+1.4
5,483,223	-		PfGW456L13_4906	0.11	+1.5
5,483,225	+		PfGW456L13_4906	0.11	-3.7
5,483,225	+		PfGW456L13_4906	0.11	-2.0
5,483,226	-		PfGW456L13_4906	0.11	-0.1
5,483,226	-		PfGW456L13_4906	0.11	+0.1
5,483,226	-		PfGW456L13_4906	0.11	-0.3
5,483,407	+		PfGW456L13_4906	0.26	-1.7
5,483,408	-		PfGW456L13_4906	0.26	+0.3
5,483,474	+		PfGW456L13_4906	0.32	+1.5
5,483,495	+		PfGW456L13_4906	0.33	-0.3
5,483,496	-		PfGW456L13_4906	0.34	+1.5
5,483,496	-		PfGW456L13_4906	0.34	+1.1
5,483,603	+		PfGW456L13_4906	0.42	-0.4
5,483,604	-		PfGW456L13_4906	0.43	-0.0
5,483,666	+		PfGW456L13_4906	0.48	-3.6
5,483,666	+		PfGW456L13_4906	0.48	+1.4
5,483,666	+		PfGW456L13_4906	0.48	-0.7
5,483,666	+		PfGW456L13_4906	0.48	-2.4
5,483,689	-		PfGW456L13_4906	0.50	-2.7
5,483,701	+		PfGW456L13_4906	0.51	-0.0
5,483,701	+		PfGW456L13_4906	0.51	+0.6
5,483,701	+		PfGW456L13_4906	0.51	+0.4
5,483,709	+		PfGW456L13_4906	0.51	+1.8
5,483,709	+		PfGW456L13_4906	0.51	+0.3
5,483,709	+		PfGW456L13_4906	0.51	-0.4
5,483,710	-		PfGW456L13_4906	0.51	+2.2
5,483,722	+		PfGW456L13_4906	0.52	+0.6
5,483,722	+		PfGW456L13_4906	0.52	-2.4
5,483,722	+		PfGW456L13_4906	0.52	+0.1
5,483,723	-		PfGW456L13_4906	0.52	+1.0
5,483,723	-		PfGW456L13_4906	0.52	+0.2
5,483,765	+		PfGW456L13_4906	0.56	-3.4
5,483,765	+		PfGW456L13_4906	0.56	+1.4
5,483,765	+		PfGW456L13_4906	0.56	-3.8
5,483,765	+		PfGW456L13_4906	0.56	-1.0
5,483,765	+		PfGW456L13_4906	0.56	+0.3
5,483,766	-		PfGW456L13_4906	0.56	+1.1