Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4684 and PfGW456L13_4685 are separated by 56 nucleotides PfGW456L13_4685 and PfGW456L13_4686 are separated by 169 nucleotides PfGW456L13_4686 and PfGW456L13_4687 are separated by 156 nucleotides
PfGW456L13_4684 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60), at 5,221,710 to 5,222,357
_4684
PfGW456L13_4685 - Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage, at 5,222,414 to 5,222,692
_4685
PfGW456L13_4686 - Enolase (EC 4.2.1.11), at 5,222,862 to 5,224,151
_4686
PfGW456L13_4687 - 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55), at 5,224,308 to 5,225,153
_4687
Position (kb)
5222
5223
5224
5225 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3 at 5222.412 kb on - strand at 5222.412 kb on - strand at 5222.782 kb on - strand at 5222.782 kb on - strand at 5222.782 kb on - strand at 5222.782 kb on - strand at 5222.782 kb on - strand at 5222.782 kb on - strand at 5222.782 kb on - strand at 5222.782 kb on - strand at 5222.782 kb on - strand at 5222.782 kb on - strand at 5222.782 kb on - strand at 5222.782 kb on - strand at 5222.782 kb on - strand at 5222.782 kb on - strand at 5222.784 kb on - strand at 5222.784 kb on - strand at 5222.784 kb on - strand at 5222.784 kb on - strand at 5222.784 kb on - strand at 5222.784 kb on - strand at 5222.784 kb on - strand at 5222.784 kb on - strand at 5222.784 kb on - strand at 5222.784 kb on - strand at 5222.784 kb on - strand at 5222.784 kb on - strand at 5222.784 kb on - strand at 5222.784 kb on - strand at 5222.784 kb on - strand at 5222.784 kb on - strand at 5222.784 kb on - strand at 5222.797 kb on - strand at 5222.857 kb on - strand at 5222.857 kb on - strand at 5222.891 kb on - strand at 5222.891 kb on - strand at 5222.891 kb on - strand at 5222.891 kb on - strand at 5222.891 kb on - strand at 5222.891 kb on - strand at 5222.891 kb on - strand at 5222.891 kb on - strand at 5224.275 kb on - strand at 5224.286 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 5,222,412 - +0.0 5,222,412 - +0.4 5,222,782 - -0.4 5,222,782 - -0.8 5,222,782 - +0.5 5,222,782 - +0.0 5,222,782 - +0.3 5,222,782 - -1.1 5,222,782 - -3.7 5,222,782 - -2.8 5,222,782 - -0.5 5,222,782 - -0.2 5,222,782 - -3.7 5,222,782 - +0.9 5,222,782 - -1.0 5,222,782 - -0.1 5,222,784 - -1.1 5,222,784 - +0.7 5,222,784 - +1.2 5,222,784 - -0.7 5,222,784 - -1.2 5,222,784 - -1.2 5,222,784 - -1.7 5,222,784 - +1.4 5,222,784 - +0.5 5,222,784 - -0.1 5,222,784 - +1.6 5,222,784 - -2.3 5,222,784 - +0.3 5,222,784 - +0.5 5,222,784 - +0.3 5,222,784 - -2.3 5,222,784 - -3.3 5,222,797 - +1.0 5,222,857 - +1.0 5,222,857 - +0.8 5,222,891 - +2.8 5,222,891 - -0.3 5,222,891 - -0.1 5,222,891 - -4.0 5,222,891 - -1.6 5,222,891 - -2.4 5,222,891 - -3.4 5,222,891 - -1.9 5,224,275 - -4.8 5,224,286 + -3.3
Or see this region's nucleotide sequence