Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4686

Experiment: Trisodium citrate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPfGW456L13_4684 and PfGW456L13_4685 are separated by 56 nucleotidesPfGW456L13_4685 and PfGW456L13_4686 are separated by 169 nucleotidesPfGW456L13_4686 and PfGW456L13_4687 are separated by 156 nucleotides PfGW456L13_4684 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60), at 5,221,710 to 5,222,357 _4684 PfGW456L13_4685 - Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage, at 5,222,414 to 5,222,692 _4685 PfGW456L13_4686 - Enolase (EC 4.2.1.11), at 5,222,862 to 5,224,151 _4686 PfGW456L13_4687 - 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55), at 5,224,308 to 5,225,153 _4687 Position (kb) 5222 5223 5224 5225Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 5222.412 kb on - strandat 5222.412 kb on - strandat 5222.782 kb on - strandat 5222.782 kb on - strandat 5222.782 kb on - strandat 5222.782 kb on - strandat 5222.782 kb on - strandat 5222.782 kb on - strandat 5222.782 kb on - strandat 5222.782 kb on - strandat 5222.782 kb on - strandat 5222.782 kb on - strandat 5222.782 kb on - strandat 5222.782 kb on - strandat 5222.782 kb on - strandat 5222.782 kb on - strandat 5222.784 kb on - strandat 5222.784 kb on - strandat 5222.784 kb on - strandat 5222.784 kb on - strandat 5222.784 kb on - strandat 5222.784 kb on - strandat 5222.784 kb on - strandat 5222.784 kb on - strandat 5222.784 kb on - strandat 5222.784 kb on - strandat 5222.784 kb on - strandat 5222.784 kb on - strandat 5222.784 kb on - strandat 5222.784 kb on - strandat 5222.784 kb on - strandat 5222.784 kb on - strandat 5222.784 kb on - strandat 5222.797 kb on - strandat 5222.857 kb on - strandat 5222.857 kb on - strandat 5222.891 kb on - strandat 5222.891 kb on - strandat 5222.891 kb on - strandat 5222.891 kb on - strandat 5222.891 kb on - strandat 5222.891 kb on - strandat 5222.891 kb on - strandat 5222.891 kb on - strandat 5224.275 kb on - strandat 5224.286 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Trisodium citrate (C)
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5,222,412 - +0.0
5,222,412 - +0.4
5,222,782 - -0.4
5,222,782 - -0.8
5,222,782 - +0.5
5,222,782 - +0.0
5,222,782 - +0.3
5,222,782 - -1.1
5,222,782 - -3.7
5,222,782 - -2.8
5,222,782 - -0.5
5,222,782 - -0.2
5,222,782 - -3.7
5,222,782 - +0.9
5,222,782 - -1.0
5,222,782 - -0.1
5,222,784 - -1.1
5,222,784 - +0.7
5,222,784 - +1.2
5,222,784 - -0.7
5,222,784 - -1.2
5,222,784 - -1.2
5,222,784 - -1.7
5,222,784 - +1.4
5,222,784 - +0.5
5,222,784 - -0.1
5,222,784 - +1.6
5,222,784 - -2.3
5,222,784 - +0.3
5,222,784 - +0.5
5,222,784 - +0.3
5,222,784 - -2.3
5,222,784 - -3.3
5,222,797 - +1.0
5,222,857 - +1.0
5,222,857 - +0.8
5,222,891 - +2.8
5,222,891 - -0.3
5,222,891 - -0.1
5,222,891 - -4.0
5,222,891 - -1.6
5,222,891 - -2.4
5,222,891 - -3.4
5,222,891 - -1.9
5,224,275 - -4.8
5,224,286 + -3.3

Or see this region's nucleotide sequence