Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4663 and PfGW456L13_4664 are separated by 189 nucleotides PfGW456L13_4664 and PfGW456L13_4665 are separated by 0 nucleotides PfGW456L13_4665 and PfGW456L13_4666 are separated by 481 nucleotides
PfGW456L13_4663 - FIG074102: hypothetical protein, at 5,202,992 to 5,203,750
_4663
PfGW456L13_4664 - Putative NADPH-quinone reductase (modulator of drug activity B), at 5,203,940 to 5,204,362
_4664
PfGW456L13_4665 - FIG00957354: hypothetical protein, at 5,204,363 to 5,204,557
_4665
PfGW456L13_4666 - Decarboxylase family protein, at 5,205,039 to 5,206,157
_4666
Position (kb) 5203
5204
5205 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 5202.972 kb on + strand at 5202.973 kb on - strand at 5202.973 kb on - strand at 5202.981 kb on - strand at 5202.981 kb on - strand at 5203.023 kb on + strand at 5203.023 kb on + strand at 5203.023 kb on + strand at 5203.023 kb on + strand at 5203.023 kb on + strand at 5203.023 kb on + strand at 5203.023 kb on + strand at 5203.023 kb on + strand at 5203.024 kb on - strand at 5203.024 kb on - strand at 5203.024 kb on - strand at 5203.024 kb on - strand at 5203.024 kb on - strand at 5203.024 kb on - strand at 5203.089 kb on + strand, within PfGW456L13_4663 at 5203.090 kb on - strand, within PfGW456L13_4663 at 5203.090 kb on - strand, within PfGW456L13_4663 at 5203.090 kb on - strand, within PfGW456L13_4663 at 5203.090 kb on - strand, within PfGW456L13_4663 at 5203.090 kb on - strand, within PfGW456L13_4663 at 5203.113 kb on + strand, within PfGW456L13_4663 at 5203.113 kb on + strand, within PfGW456L13_4663 at 5203.114 kb on - strand, within PfGW456L13_4663 at 5203.114 kb on - strand, within PfGW456L13_4663 at 5203.114 kb on - strand, within PfGW456L13_4663 at 5203.163 kb on + strand, within PfGW456L13_4663 at 5203.164 kb on - strand, within PfGW456L13_4663 at 5203.164 kb on - strand, within PfGW456L13_4663 at 5203.164 kb on - strand, within PfGW456L13_4663 at 5203.389 kb on + strand, within PfGW456L13_4663 at 5203.389 kb on + strand, within PfGW456L13_4663 at 5203.390 kb on - strand, within PfGW456L13_4663 at 5203.390 kb on - strand, within PfGW456L13_4663 at 5203.410 kb on + strand, within PfGW456L13_4663 at 5203.410 kb on + strand, within PfGW456L13_4663 at 5203.410 kb on + strand, within PfGW456L13_4663 at 5203.411 kb on - strand, within PfGW456L13_4663 at 5203.411 kb on - strand, within PfGW456L13_4663 at 5203.411 kb on - strand, within PfGW456L13_4663 at 5203.411 kb on - strand, within PfGW456L13_4663 at 5203.411 kb on - strand, within PfGW456L13_4663 at 5203.713 kb on - strand at 5203.741 kb on + strand at 5203.823 kb on - strand at 5203.858 kb on + strand at 5203.858 kb on + strand at 5203.859 kb on - strand at 5203.868 kb on + strand at 5203.869 kb on - strand at 5203.870 kb on + strand at 5203.952 kb on - strand at 5204.108 kb on + strand, within PfGW456L13_4664 at 5204.108 kb on + strand, within PfGW456L13_4664 at 5204.109 kb on - strand, within PfGW456L13_4664 at 5204.109 kb on - strand, within PfGW456L13_4664 at 5204.195 kb on + strand, within PfGW456L13_4664 at 5204.196 kb on - strand, within PfGW456L13_4664 at 5204.196 kb on - strand, within PfGW456L13_4664 at 5204.196 kb on - strand, within PfGW456L13_4664 at 5204.196 kb on - strand, within PfGW456L13_4664 at 5204.196 kb on - strand, within PfGW456L13_4664 at 5204.271 kb on - strand, within PfGW456L13_4664 at 5204.360 kb on + strand at 5204.361 kb on - strand at 5204.361 kb on - strand at 5204.520 kb on + strand, within PfGW456L13_4665 at 5204.521 kb on - strand, within PfGW456L13_4665 at 5204.616 kb on + strand at 5204.616 kb on + strand at 5204.616 kb on + strand at 5204.617 kb on - strand at 5204.617 kb on - strand at 5204.617 kb on - strand at 5204.617 kb on - strand at 5204.617 kb on - strand at 5204.617 kb on - strand at 5204.661 kb on + strand at 5204.662 kb on - strand at 5204.662 kb on - strand at 5204.662 kb on - strand at 5204.666 kb on + strand at 5204.666 kb on + strand at 5204.666 kb on + strand at 5204.666 kb on + strand at 5204.667 kb on - strand at 5204.667 kb on - strand at 5204.667 kb on - strand at 5204.667 kb on - strand at 5204.667 kb on - strand at 5204.670 kb on - strand at 5204.801 kb on + strand at 5204.801 kb on + strand at 5204.802 kb on - strand at 5204.863 kb on + strand at 5204.863 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.937 kb on + strand at 5204.938 kb on - strand at 5204.938 kb on - strand at 5204.938 kb on - strand at 5204.938 kb on - strand at 5204.938 kb on - strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.997 kb on + strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5204.998 kb on - strand at 5205.045 kb on + strand at 5205.046 kb on - strand at 5205.168 kb on - strand, within PfGW456L13_4666 at 5205.185 kb on - strand, within PfGW456L13_4666 at 5205.185 kb on - strand, within PfGW456L13_4666 at 5205.185 kb on - strand, within PfGW456L13_4666 at 5205.342 kb on + strand, within PfGW456L13_4666 at 5205.342 kb on + strand, within PfGW456L13_4666 at 5205.342 kb on + strand, within PfGW456L13_4666 at 5205.343 kb on - strand, within PfGW456L13_4666 at 5205.343 kb on - strand, within PfGW456L13_4666 at 5205.343 kb on - strand, within PfGW456L13_4666
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 5,202,972 + -2.9 5,202,973 - +0.4 5,202,973 - +2.1 5,202,981 - -0.9 5,202,981 - -0.9 5,203,023 + +2.0 5,203,023 + +1.0 5,203,023 + -3.1 5,203,023 + +2.6 5,203,023 + -4.8 5,203,023 + +0.8 5,203,023 + +0.0 5,203,023 + +1.0 5,203,024 - -1.1 5,203,024 - +2.3 5,203,024 - +1.9 5,203,024 - +0.0 5,203,024 - -1.9 5,203,024 - +1.3 5,203,089 + PfGW456L13_4663 0.13 -2.6 5,203,090 - PfGW456L13_4663 0.13 -1.7 5,203,090 - PfGW456L13_4663 0.13 +1.1 5,203,090 - PfGW456L13_4663 0.13 -0.5 5,203,090 - PfGW456L13_4663 0.13 +0.5 5,203,090 - PfGW456L13_4663 0.13 +0.0 5,203,113 + PfGW456L13_4663 0.16 +0.8 5,203,113 + PfGW456L13_4663 0.16 +0.4 5,203,114 - PfGW456L13_4663 0.16 +0.0 5,203,114 - PfGW456L13_4663 0.16 -0.4 5,203,114 - PfGW456L13_4663 0.16 +1.1 5,203,163 + PfGW456L13_4663 0.23 -2.7 5,203,164 - PfGW456L13_4663 0.23 +0.6 5,203,164 - PfGW456L13_4663 0.23 +0.8 5,203,164 - PfGW456L13_4663 0.23 -0.8 5,203,389 + PfGW456L13_4663 0.52 +1.3 5,203,389 + PfGW456L13_4663 0.52 +0.1 5,203,390 - PfGW456L13_4663 0.52 +1.0 5,203,390 - PfGW456L13_4663 0.52 +0.1 5,203,410 + PfGW456L13_4663 0.55 +0.2 5,203,410 + PfGW456L13_4663 0.55 +0.9 5,203,410 + PfGW456L13_4663 0.55 -4.1 5,203,411 - PfGW456L13_4663 0.55 +1.0 5,203,411 - PfGW456L13_4663 0.55 +2.5 5,203,411 - PfGW456L13_4663 0.55 -0.5 5,203,411 - PfGW456L13_4663 0.55 +1.5 5,203,411 - PfGW456L13_4663 0.55 -0.1 5,203,713 - +1.1 5,203,741 + -0.2 5,203,823 - -0.7 5,203,858 + +1.3 5,203,858 + -4.7 5,203,859 - +0.4 5,203,868 + -2.9 5,203,869 - +0.2 5,203,870 + +0.6 5,203,952 - -0.4 5,204,108 + PfGW456L13_4664 0.40 -1.7 5,204,108 + PfGW456L13_4664 0.40 -2.1 5,204,109 - PfGW456L13_4664 0.40 +0.7 5,204,109 - PfGW456L13_4664 0.40 +1.2 5,204,195 + PfGW456L13_4664 0.60 -2.1 5,204,196 - PfGW456L13_4664 0.61 +0.4 5,204,196 - PfGW456L13_4664 0.61 +1.2 5,204,196 - PfGW456L13_4664 0.61 +2.1 5,204,196 - PfGW456L13_4664 0.61 +0.4 5,204,196 - PfGW456L13_4664 0.61 +0.2 5,204,271 - PfGW456L13_4664 0.78 +1.6 5,204,360 + -3.8 5,204,361 - +0.4 5,204,361 - +0.4 5,204,520 + PfGW456L13_4665 0.81 +1.6 5,204,521 - PfGW456L13_4665 0.81 +0.9 5,204,616 + -0.2 5,204,616 + -0.7 5,204,616 + -1.1 5,204,617 - +1.7 5,204,617 - +0.2 5,204,617 - +0.0 5,204,617 - +1.0 5,204,617 - -3.9 5,204,617 - +1.2 5,204,661 + -0.5 5,204,662 - +1.1 5,204,662 - -0.5 5,204,662 - +0.1 5,204,666 + +0.5 5,204,666 + -0.1 5,204,666 + +0.4 5,204,666 + +0.9 5,204,667 - -0.2 5,204,667 - -2.4 5,204,667 - -4.1 5,204,667 - -4.4 5,204,667 - -0.2 5,204,670 - +0.4 5,204,801 + +0.7 5,204,801 + -3.9 5,204,802 - +1.9 5,204,863 + -3.8 5,204,863 + -0.9 5,204,937 + +0.9 5,204,937 + +0.3 5,204,937 + +0.2 5,204,937 + +0.4 5,204,937 + +0.5 5,204,937 + +0.6 5,204,937 + -1.2 5,204,937 + -1.5 5,204,937 + -0.0 5,204,937 + +2.2 5,204,937 + +0.0 5,204,937 + +1.0 5,204,937 + -0.4 5,204,938 - +0.1 5,204,938 - -0.5 5,204,938 - -2.6 5,204,938 - +2.1 5,204,938 - +0.5 5,204,997 + +1.8 5,204,997 + +0.2 5,204,997 + +0.9 5,204,997 + +0.6 5,204,997 + +2.5 5,204,997 + +0.7 5,204,997 + +1.1 5,204,997 + +0.7 5,204,997 + -1.7 5,204,997 + +2.1 5,204,997 + -0.6 5,204,997 + +2.6 5,204,997 + +0.9 5,204,997 + -2.1 5,204,998 - -1.4 5,204,998 - -1.3 5,204,998 - -1.2 5,204,998 - -3.1 5,204,998 - -0.4 5,204,998 - +0.0 5,204,998 - -0.9 5,204,998 - +0.3 5,204,998 - +0.8 5,204,998 - +0.7 5,204,998 - -2.6 5,204,998 - +0.2 5,205,045 + +0.4 5,205,046 - -0.4 5,205,168 - PfGW456L13_4666 0.12 +1.9 5,205,185 - PfGW456L13_4666 0.13 -0.9 5,205,185 - PfGW456L13_4666 0.13 -0.1 5,205,185 - PfGW456L13_4666 0.13 -2.4 5,205,342 + PfGW456L13_4666 0.27 -2.6 5,205,342 + PfGW456L13_4666 0.27 +0.5 5,205,342 + PfGW456L13_4666 0.27 +0.2 5,205,343 - PfGW456L13_4666 0.27 +0.9 5,205,343 - PfGW456L13_4666 0.27 +0.0 5,205,343 - PfGW456L13_4666 0.27 +1.1
Or see this region's nucleotide sequence