Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4517

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
5,048,910	+		PfGW456L13_4516	0.23	+2.6
5,048,911	-		PfGW456L13_4516	0.23	-2.7
5,048,911	-		PfGW456L13_4516	0.23	+1.6
5,048,911	-		PfGW456L13_4516	0.23	+2.0
5,048,916	+		PfGW456L13_4516	0.24	+1.3
5,049,037	+		PfGW456L13_4516	0.45	+2.6
5,049,038	-		PfGW456L13_4516	0.45	+0.8
5,049,038	-				+3.8
5,049,038	-		PfGW456L13_4516	0.45	+1.7
5,049,038	-		PfGW456L13_4516	0.45	+0.7
5,049,038	-		PfGW456L13_4516	0.45	-0.2
5,049,140	+		PfGW456L13_4516	0.63	-2.9
5,049,141	-		PfGW456L13_4516	0.63	+2.5
5,049,141	-		PfGW456L13_4516	0.63	+2.3
5,049,143	-		PfGW456L13_4516	0.63	-4.4
5,049,143	-		PfGW456L13_4516	0.63	+2.6
5,049,143	-		PfGW456L13_4516	0.63	+1.3
5,049,182	-		PfGW456L13_4516	0.70	+3.1
5,049,191	+		PfGW456L13_4516	0.71	+2.5
5,049,272	-		PfGW456L13_4516	0.85	+0.1
5,049,272	-		PfGW456L13_4516	0.85	+2.3
5,049,272	-		PfGW456L13_4516	0.85	+1.8
5,049,272	-		PfGW456L13_4516	0.85	+2.5
5,049,282	+		PfGW456L13_4516	0.87	-2.8
5,049,283	-		PfGW456L13_4516	0.87	+0.3
5,049,283	-		PfGW456L13_4516	0.87	-4.3
5,049,283	-		PfGW456L13_4516	0.87	+2.0
5,049,395	+				+2.2
5,049,396	-				+0.6
5,049,417	+				+2.2
5,049,418	-				+2.2
5,049,418	-				+2.4
5,049,608	+				+2.3
5,049,641	+				+2.7
5,049,641	+				+1.8
5,049,642	-				-1.1
5,049,642	-				-1.6
5,049,642	-				-3.2
5,049,645	+				-0.5
5,049,645	+				+2.1
5,049,646	-				-2.4
5,049,647	+				+2.2
5,049,695	+				+1.5
5,049,696	-				-2.4
5,049,696	-				-0.9
5,049,696	-				+0.0
5,049,707	-				-2.6
5,049,792	+				+1.0
5,049,793	-				-0.3
5,049,793	-				-0.6
5,049,793	-				-1.1
5,049,802	-				-2.8
5,049,822	+				-3.3
5,049,822	+				+1.8
5,049,822	+				-0.6
5,049,822	+				-3.4
5,049,822	+				-0.3
5,049,822	+				-0.6
5,049,822	+				-2.8
5,049,822	+				+2.8
5,049,822	+				+0.6
5,049,823	-				-1.2
5,049,823	-				+0.5
5,049,823	-				-2.4
5,049,823	-				-1.1
5,049,823	-				+0.0
5,049,823	-				-1.5
5,049,823	-				+1.0
5,049,823	-				-0.6
5,049,824	+				+0.9
5,049,824	+				+0.3
5,049,824	+				-1.2
5,049,824	+				-3.8
5,049,824	+				+2.7
5,049,824	+				+1.0
5,049,824	+				+2.6
5,049,824	+				-2.8
5,049,824	+				+0.8
5,049,824	+				+1.6
5,049,824	+				-2.0
5,049,824	+				+2.1
5,049,824	+				+0.5
5,049,824	+				+1.1
5,049,824	+				-0.6
5,049,824	+				-4.1
5,049,824	+				+1.7
5,049,825	-				-3.6
5,049,825	-				+1.2
5,049,825	-				-2.9
5,049,825	-				+0.5
5,049,825	-				-0.8
5,049,825	-				-1.6
5,049,825	-				+0.4
5,049,825	-				-0.1
5,049,825	-				+1.0
5,049,825	-				-1.8
5,049,825	-				-2.4
5,049,825	-				-3.6
5,049,826	+				-2.3
5,049,826	+				+1.2
5,049,826	+				+0.4
5,049,826	+				-3.5
5,049,826	+				+0.9
5,049,826	+				+2.3
5,049,826	+				-1.4
5,049,826	+				+1.3
5,049,826	+				-0.0
5,049,826	+				+0.2
5,049,826	+				-0.2
5,049,826	+				+2.4
5,049,826	+				+1.0
5,049,826	+				+2.7
5,049,826	+				+1.8
5,049,826	+				-4.3
5,049,826	+				+1.4
5,049,826	+				+1.2
5,049,826	+				+1.4
5,049,826	+				-3.2
5,049,826	+				-4.3
5,049,826	+				-0.5
5,049,826	+				+0.4
5,049,826	+				+1.4
5,049,827	-				-0.4
5,049,827	-				-3.9
5,049,827	-				-3.2
5,049,827	-				-1.8
5,049,827	-				-3.7
5,049,827	-				-1.6
5,049,827	-				+1.0
5,049,827	-				+0.8
5,049,827	-				-1.0
5,049,827	-				-1.6
5,049,827	-				-0.2
5,049,827	-				-1.6
5,049,827	-				+0.0
5,049,827	-				-2.7
5,049,827	-				-0.8
5,049,829	+				+1.5
5,049,829	+				+1.1
5,049,829	+				+1.8
5,049,829	+				+0.8
5,049,830	-				-2.0
5,049,830	-				-2.3
5,049,940	+				-1.3
5,050,406	+		PfGW456L13_4517	0.31	-0.9
5,050,406	+		PfGW456L13_4517	0.31	-3.6
5,050,406	+		PfGW456L13_4517	0.31	-2.0
5,050,406	+		PfGW456L13_4517	0.31	-3.4
5,050,406	+		PfGW456L13_4517	0.31	-1.7
5,050,406	+		PfGW456L13_4517	0.31	-1.8
5,050,406	+		PfGW456L13_4517	0.31	-1.2
5,050,407	-		PfGW456L13_4517	0.31	-2.9
5,050,407	-		PfGW456L13_4517	0.31	-2.8
5,050,407	-		PfGW456L13_4517	0.31	-0.8
5,050,407	-		PfGW456L13_4517	0.31	-2.8
5,050,407	-		PfGW456L13_4517	0.31	-1.9
5,050,455	+		PfGW456L13_4517	0.34	+0.0
5,050,455	+		PfGW456L13_4517	0.34	-1.1
5,050,491	+		PfGW456L13_4517	0.36	-3.8
5,050,491	+		PfGW456L13_4517	0.36	+0.0
5,050,492	-		PfGW456L13_4517	0.36	-2.1
5,050,492	-		PfGW456L13_4517	0.36	-2.2
5,050,539	+		PfGW456L13_4517	0.39	-3.9
5,050,539	+		PfGW456L13_4517	0.39	-3.0
5,050,539	+		PfGW456L13_4517	0.39	-3.4
5,050,546	-		PfGW456L13_4517	0.39	-1.4
5,050,546	-		PfGW456L13_4517	0.39	-3.0
5,050,644	-		PfGW456L13_4517	0.45	-1.6
5,050,644	-		PfGW456L13_4517	0.45	-1.8
5,050,644	-		PfGW456L13_4517	0.45	-1.9
5,050,644	-		PfGW456L13_4517	0.45	-3.9
5,050,653	+		PfGW456L13_4517	0.46	-0.6
5,050,653	+		PfGW456L13_4517	0.46	-0.9
5,050,837	-		PfGW456L13_4517	0.57	-2.4
5,050,893	+		PfGW456L13_4517	0.61	-0.9
5,050,893	+		PfGW456L13_4517	0.61	-3.1
5,050,893	+		PfGW456L13_4517	0.61	-0.2
5,050,894	-		PfGW456L13_4517	0.61	-2.4
5,050,894	-		PfGW456L13_4517	0.61	-0.4
5,050,962	+		PfGW456L13_4517	0.65	-0.5
5,050,962	+		PfGW456L13_4517	0.65	-2.4
5,050,962	+		PfGW456L13_4517	0.65	-2.3
5,050,962	+		PfGW456L13_4517	0.65	-2.5
5,050,963	-		PfGW456L13_4517	0.65	-1.1
5,050,963	-		PfGW456L13_4517	0.65	-1.0
5,051,019	+		PfGW456L13_4517	0.69	-0.7
5,051,019	+		PfGW456L13_4517	0.69	-0.4
5,051,019	+		PfGW456L13_4517	0.69	-1.3
5,051,020	-		PfGW456L13_4517	0.69	-0.8
5,051,020	-		PfGW456L13_4517	0.69	-1.8
5,051,100	+		PfGW456L13_4517	0.74	-3.2
5,051,100	+		PfGW456L13_4517	0.74	-1.4
5,051,100	+		PfGW456L13_4517	0.74	-3.0
5,051,256	+		PfGW456L13_4517	0.83	-3.3
5,051,256	+		PfGW456L13_4517	0.83	-2.1
5,051,256	+		PfGW456L13_4517	0.83	-1.0
5,051,256	+		PfGW456L13_4517	0.83	-4.2
5,051,256	+		PfGW456L13_4517	0.83	-3.4
5,051,256	+		PfGW456L13_4517	0.83	-1.8
5,051,257	-		PfGW456L13_4517	0.83	+0.3
5,051,257	-		PfGW456L13_4517	0.83	+0.4
5,051,257	-		PfGW456L13_4517	0.83	-1.4
5,051,257	-		PfGW456L13_4517	0.83	-0.6
5,051,257	-		PfGW456L13_4517	0.83	-1.7
5,051,341	-		PfGW456L13_4517	0.89	-2.6
5,051,349	+		PfGW456L13_4517	0.89	-1.3
5,051,349	+		PfGW456L13_4517	0.89	-1.5
5,051,349	+		PfGW456L13_4517	0.89	-0.8
5,051,349	+		PfGW456L13_4517	0.89	-0.7
5,051,349	+		PfGW456L13_4517	0.89	-0.8
5,051,349	+		PfGW456L13_4517	0.89	-0.1
5,051,349	+		PfGW456L13_4517	0.89	-3.6
5,051,350	-		PfGW456L13_4517	0.89	-1.0
5,051,350	-		PfGW456L13_4517	0.89	+0.0
5,051,350	-		PfGW456L13_4517	0.89	-0.0
5,051,350	-		PfGW456L13_4517	0.89	-2.6
5,051,350	-		PfGW456L13_4517	0.89	-2.1
5,051,350	-		PfGW456L13_4517	0.89	+0.8
5,051,350	-		PfGW456L13_4517	0.89	-1.3
5,051,350	-		PfGW456L13_4517	0.89	-1.8
5,051,350	-		PfGW456L13_4517	0.89	-2.0
5,051,350	-				+0.0
5,051,350	-		PfGW456L13_4517	0.89	-2.9
5,051,350	-		PfGW456L13_4517	0.89	-3.8
5,051,451	+				-3.6
5,051,451	+				-2.0
5,051,451	+				-2.3
5,051,451	+				-1.8
5,051,451	+				-4.8
5,051,451	+				-0.7
5,051,451	+				-1.1
5,051,451	+				-1.1
5,051,451	+				-0.6
5,051,452	-				-1.0
5,051,452	-				-3.1
5,051,452	-				-3.2
5,051,452	-				-1.4
5,051,452	-				-1.8
5,051,452	-				+0.8
5,051,452	-				-3.6
5,051,495	+				-4.8
5,051,495	+				-3.2
5,051,495	+				-0.6
5,051,496	-				-2.3
5,051,496	-				-4.6
5,051,496	-				-1.6
5,051,514	+				+0.6
5,051,514	+				+1.0
5,051,515	-				+1.0
5,051,515	-				-0.2
5,051,515	-				-4.4
5,051,515	-				+0.7
5,051,515	-				+0.1
5,051,515	-				-3.4
5,051,630	-		PfGW456L13_4518	0.34	+0.5
5,051,843	-		PfGW456L13_4518	0.87	-1.0
5,051,843	-		PfGW456L13_4518	0.87	+0.9
5,051,882	+				-2.4
5,051,931	+				-1.6
5,051,931	+				-1.6
5,051,932	-				+0.4
5,051,932	-				+1.9
5,051,932	-				+0.4
5,052,201	-		PfGW456L13_4520	0.18	-2.6
5,052,201	-		PfGW456L13_4520	0.18	+0.6
5,052,212	-		PfGW456L13_4520	0.24	+0.4
5,052,212	-		PfGW456L13_4520	0.24	-4.2
5,052,212	-		PfGW456L13_4520	0.24	+1.5
5,052,212	-		PfGW456L13_4520	0.24	+0.9
5,052,212	-		PfGW456L13_4520	0.24	+1.4
5,052,212	-		PfGW456L13_4520	0.24	-0.2
5,052,212	-		PfGW456L13_4520	0.24	+0.4
5,052,213	+		PfGW456L13_4520	0.24	-0.1
5,052,213	+		PfGW456L13_4520	0.24	+0.4
5,052,213	+		PfGW456L13_4520	0.24	-3.0
5,052,270	+		PfGW456L13_4520	0.52	+0.8
5,052,271	-		PfGW456L13_4520	0.52	+0.4
5,052,271	-		PfGW456L13_4520	0.52	-1.3
5,052,274	+		PfGW456L13_4520	0.54	-0.6
5,052,274	+		PfGW456L13_4520	0.54	+2.2
5,052,275	-		PfGW456L13_4520	0.54	+1.2
5,052,275	-		PfGW456L13_4520	0.54	-0.4
5,052,275	-		PfGW456L13_4520	0.54	-1.5
5,052,275	-		PfGW456L13_4520	0.54	+0.8
5,052,297	+		PfGW456L13_4520	0.65	+1.4
5,052,297	+		PfGW456L13_4520	0.65	+0.5
5,052,298	-		PfGW456L13_4520	0.65	+0.1