Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4464

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
4,987,492	-		PfGW456L13_4463	0.39	+0.3
4,987,495	+		PfGW456L13_4463	0.39	+2.5
4,987,495	+		PfGW456L13_4463	0.39	-3.4
4,987,495	+		PfGW456L13_4463	0.39	+1.0
4,987,496	-		PfGW456L13_4463	0.39	+2.0
4,987,496	-		PfGW456L13_4463	0.39	-0.7
4,987,496	-		PfGW456L13_4463	0.39	+1.5
4,987,496	-		PfGW456L13_4463	0.39	-3.2
4,987,496	-		PfGW456L13_4463	0.39	-1.5
4,987,496	-		PfGW456L13_4463	0.39	+1.0
4,987,503	+		PfGW456L13_4463	0.40	-4.0
4,987,512	+		PfGW456L13_4463	0.41	+0.1
4,987,512	+		PfGW456L13_4463	0.41	-0.9
4,987,513	-		PfGW456L13_4463	0.41	-0.2
4,987,680	+		PfGW456L13_4463	0.56	-3.5
4,987,680	+		PfGW456L13_4463	0.56	+1.6
4,987,701	-		PfGW456L13_4463	0.57	-2.0
4,987,701	-		PfGW456L13_4463	0.57	+1.5
4,987,701	-		PfGW456L13_4463	0.57	-2.4
4,987,894	-		PfGW456L13_4463	0.74	-1.7
4,987,896	+		PfGW456L13_4463	0.75	+0.2
4,987,896	+		PfGW456L13_4463	0.75	+2.0
4,987,897	-		PfGW456L13_4463	0.75	-1.9
4,987,897	-		PfGW456L13_4463	0.75	+0.1
4,987,897	-		PfGW456L13_4463	0.75	-0.1
4,987,897	-		PfGW456L13_4463	0.75	-0.2
4,987,947	+		PfGW456L13_4463	0.79	+0.0
4,987,947	+		PfGW456L13_4463	0.79	+2.3
4,987,947	+		PfGW456L13_4463	0.79	+0.6
4,987,948	-		PfGW456L13_4463	0.79	+0.8
4,987,956	+		PfGW456L13_4463	0.80	+0.6
4,988,018	+		PfGW456L13_4463	0.85	-1.8
4,988,018	+		PfGW456L13_4463	0.85	-1.9
4,988,018	+		PfGW456L13_4463	0.85	+0.5
4,988,019	-		PfGW456L13_4463	0.85	-3.0
4,988,019	-		PfGW456L13_4463	0.85	-1.1
4,988,019	-		PfGW456L13_4463	0.85	+2.7
4,988,019	-		PfGW456L13_4463	0.85	-0.4
4,988,019	-		PfGW456L13_4463	0.85	+0.4
4,988,222	+				+1.0
4,988,223	-				+0.6
4,988,272	+				+0.6
4,988,272	+				+1.5
4,988,290	+				-2.6
4,988,401	+				-2.5
4,988,401	+				+0.9
4,988,458	-				-0.5
4,988,458	-				-4.2
4,988,458	-				-0.7
4,988,597	-		PfGW456L13_4464	0.10	+0.4
4,988,804	+		PfGW456L13_4464	0.26	-3.2
4,988,857	+		PfGW456L13_4464	0.30	+0.7
4,988,857	+		PfGW456L13_4464	0.30	+0.5
4,988,858	-		PfGW456L13_4464	0.30	+1.4
4,988,858	-		PfGW456L13_4464	0.30	-2.3
4,988,858	-		PfGW456L13_4464	0.30	-1.4
4,988,889	+		PfGW456L13_4464	0.32	-0.5
4,988,890	-				-1.0
4,988,950	+		PfGW456L13_4464	0.37	-1.6
4,988,950	+		PfGW456L13_4464	0.37	+0.1
4,988,950	+		PfGW456L13_4464	0.37	+0.6
4,988,950	+		PfGW456L13_4464	0.37	+0.5
4,988,950	+		PfGW456L13_4464	0.37	-1.1
4,988,950	+		PfGW456L13_4464	0.37	-2.9
4,988,950	+		PfGW456L13_4464	0.37	+0.7
4,988,950	+		PfGW456L13_4464	0.37	+0.4
4,988,950	+		PfGW456L13_4464	0.37	-1.3
4,988,950	+		PfGW456L13_4464	0.37	-0.9
4,988,950	+		PfGW456L13_4464	0.37	-0.1
4,988,951	-		PfGW456L13_4464	0.37	+0.7
4,988,986	+		PfGW456L13_4464	0.40	-2.6
4,988,987	-		PfGW456L13_4464	0.40	+1.9
4,988,995	+		PfGW456L13_4464	0.40	-1.1
4,988,996	-		PfGW456L13_4464	0.40	-4.2
4,989,111	+		PfGW456L13_4464	0.49	-1.7
4,989,112	-		PfGW456L13_4464	0.49	-1.8
4,989,115	+		PfGW456L13_4464	0.49	-0.1
4,989,115	+		PfGW456L13_4464	0.49	-3.0
4,989,115	+		PfGW456L13_4464	0.49	-3.3
4,989,115	+		PfGW456L13_4464	0.49	+0.8
4,989,115	+		PfGW456L13_4464	0.49	+0.2
4,989,115	+		PfGW456L13_4464	0.49	-2.2
4,989,115	+		PfGW456L13_4464	0.49	-1.3
4,989,115	+		PfGW456L13_4464	0.49	-0.3
4,989,115	+		PfGW456L13_4464	0.49	-0.8
4,989,115	+		PfGW456L13_4464	0.49	+0.9
4,989,115	+		PfGW456L13_4464	0.49	+1.7
4,989,115	+		PfGW456L13_4464	0.49	+0.2
4,989,115	+		PfGW456L13_4464	0.49	+0.0
4,989,115	+		PfGW456L13_4464	0.49	-1.0
4,989,116	-		PfGW456L13_4464	0.49	+0.4
4,989,116	-		PfGW456L13_4464	0.49	+0.7
4,989,116	-		PfGW456L13_4464	0.49	+1.1
4,989,116	-		PfGW456L13_4464	0.49	+0.0
4,989,116	-		PfGW456L13_4464	0.49	+0.2
4,989,116	-		PfGW456L13_4464	0.49	+0.2
4,989,116	-		PfGW456L13_4464	0.49	+0.4
4,989,122	-		PfGW456L13_4464	0.50	-0.2
4,989,166	+		PfGW456L13_4464	0.53	+0.9
4,989,167	-		PfGW456L13_4464	0.53	+0.1
4,989,227	-		PfGW456L13_4464	0.58	-0.1
4,989,227	-		PfGW456L13_4464	0.58	+1.4
4,989,227	-		PfGW456L13_4464	0.58	+0.7
4,989,295	+		PfGW456L13_4464	0.63	+0.1
4,989,296	-		PfGW456L13_4464	0.63	-0.7
4,989,301	+		PfGW456L13_4464	0.63	-1.0
4,989,403	+		PfGW456L13_4464	0.71	-2.9
4,989,466	+		PfGW456L13_4464	0.76	-1.4
4,989,466	+		PfGW456L13_4464	0.76	-3.0
4,989,466	+		PfGW456L13_4464	0.76	+1.8
4,989,467	-		PfGW456L13_4464	0.76	-0.3
4,989,467	-		PfGW456L13_4464	0.76	+0.5
4,989,467	-		PfGW456L13_4464	0.76	-0.3
4,989,467	-		PfGW456L13_4464	0.76	-0.2
4,989,467	-		PfGW456L13_4464	0.76	+1.3
4,989,553	+		PfGW456L13_4464	0.82	-0.7
4,989,553	+		PfGW456L13_4464	0.82	-2.9
4,989,553	+		PfGW456L13_4464	0.82	-2.9
4,989,553	+		PfGW456L13_4464	0.82	-1.3
4,989,554	-		PfGW456L13_4464	0.82	+1.6
4,989,554	-		PfGW456L13_4464	0.82	+1.1
4,989,554	-		PfGW456L13_4464	0.82	-0.0
4,989,554	-		PfGW456L13_4464	0.82	+0.9
4,989,554	-		PfGW456L13_4464	0.82	-1.3
4,989,559	+		PfGW456L13_4464	0.83	+0.5
4,989,560	-		PfGW456L13_4464	0.83	-2.9
4,989,570	-		PfGW456L13_4464	0.83	+1.7
4,989,577	-		PfGW456L13_4464	0.84	+0.4
4,989,658	+				-2.6
4,989,658	+				-4.3
4,989,694	+				-4.1
4,989,694	+				-0.7
4,989,694	+				-2.0
4,989,695	-				-2.7
4,989,695	-				+0.3
4,989,695	-				+2.0
4,989,695	-				-0.7
4,989,695	-				-0.1
4,989,695	-				-4.0
4,989,695	-				-1.3
4,989,695	-				-1.8
4,989,695	-				+2.2
4,989,695	-				+0.7
4,989,695	-				-0.7
4,989,697	+				+0.5
4,989,697	+				-1.7
4,989,697	+				+1.5
4,989,697	+				-1.1
4,989,697	+				-2.9
4,989,697	+				-0.1
4,989,697	+				-3.8
4,989,697	+				-3.2
4,989,697	+				+0.7
4,989,698	-				+0.6
4,989,698	-				-3.4
4,989,698	-				-0.6
4,989,698	-				-0.1
4,989,698	-				+0.6
4,989,698	-				+0.3
4,989,698	-				-0.5
4,989,698	-				-2.0
4,989,698	-				+0.0
4,989,698	-				+0.4
4,989,698	-				+1.5
4,989,698	-				-0.6
4,989,698	-				-1.4
4,989,698	-				-2.7
4,989,698	-				-0.9
4,989,698	-				+1.4
4,989,698	-				-0.8
4,989,698	-				-1.0
4,989,802	+				+1.0
4,989,802	+				+1.3
4,989,802	+				+0.4
4,989,803	-				+0.8
4,989,803	-				-0.1
4,989,803	-				-3.3
4,989,803	-				+0.8
4,989,803	-				-1.7
4,989,803	-				+0.2
4,989,803	-				+1.9
4,989,834	+				-4.2
4,989,834	+				+0.3
4,989,834	+				-0.2
4,989,835	-				+0.2
4,989,835	-				+1.0
4,989,835	-				+0.5
4,989,835	-				-3.8
4,989,852	+				-0.2
4,989,852	+				-2.2
4,989,852	+				+0.8
4,989,852	+				+0.3
4,989,853	-				-0.4
4,989,853	-				+1.0
4,989,853	-				+0.2
4,989,853	-				-3.3
4,989,853	-				+0.6
4,989,899	+				-2.5
4,989,915	+				-0.6
4,989,916	-				-1.7
4,989,916	-				+0.0
4,989,916	-				+0.7
4,989,916	-				-3.7
4,989,918	+				+2.8
4,989,918	+				-3.0
4,989,918	+				+0.4
4,989,918	+				+0.8
4,989,918	+				+1.1
4,989,918	+				-0.7
4,989,919	-				+0.1
4,989,919	-				-0.6
4,989,993	+				+0.9
4,989,993	+				-1.3
4,989,993	+				+0.1
4,989,993	+				-3.2
4,989,993	+				-3.3
4,989,993	+				-0.5
4,989,993	+				+1.6
4,989,993	+				-1.6
4,989,994	-				-2.1
4,989,994	-				-0.7
4,989,994	-				+1.1
4,989,994	-				-4.0
4,989,994	-				+0.2
4,989,994	-				-0.4
4,989,994	-				+0.6
4,989,994	-				+1.8
4,989,994	-				-0.6
4,990,012	-				-0.8
4,990,089	+				+2.4
4,990,089	+				+0.5
4,990,089	+				+1.1
4,990,090	-				+0.6
4,990,122	+				-2.9
4,990,123	-				+1.2
4,990,133	+				-3.6
4,990,235	+		PfGW456L13_4465	0.12	-0.4
4,990,235	+		PfGW456L13_4465	0.12	+0.4
4,990,235	+		PfGW456L13_4465	0.12	-2.9
4,990,236	-		PfGW456L13_4465	0.12	+1.2
4,990,236	-		PfGW456L13_4465	0.12	-2.0
4,990,236	-		PfGW456L13_4465	0.12	+0.1
4,990,562	+		PfGW456L13_4465	0.41	+0.6
4,990,563	-		PfGW456L13_4465	0.41	+0.3
4,990,711	+		PfGW456L13_4465	0.55	+1.7
4,990,711	+		PfGW456L13_4465	0.55	+1.5
4,990,711	+		PfGW456L13_4465	0.55	+0.7
4,990,711	+		PfGW456L13_4465	0.55	-1.5
4,990,711	+		PfGW456L13_4465	0.55	-2.5
4,990,712	-		PfGW456L13_4465	0.55	-0.4