Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4217

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
4,729,111	+		PfGW456L13_4216	0.13	-3.4
4,729,111	+		PfGW456L13_4216	0.13	+0.2
4,729,111	+		PfGW456L13_4216	0.13	+0.3
4,729,112	-		PfGW456L13_4216	0.13	+0.5
4,729,112	-		PfGW456L13_4216	0.13	-4.8
4,729,158	-		PfGW456L13_4216	0.18	-1.3
4,729,206	+		PfGW456L13_4216	0.24	+1.3
4,729,206	+		PfGW456L13_4216	0.24	-2.9
4,729,207	-		PfGW456L13_4216	0.24	+0.0
4,729,285	+		PfGW456L13_4216	0.32	+0.9
4,729,285	+		PfGW456L13_4216	0.32	+0.1
4,729,285	+				-0.1
4,729,285	+		PfGW456L13_4216	0.32	-0.8
4,729,285	+		PfGW456L13_4216	0.32	-5.0
4,729,285	+		PfGW456L13_4216	0.32	+0.3
4,729,285	+		PfGW456L13_4216	0.32	-3.5
4,729,286	-				-1.7
4,729,286	-		PfGW456L13_4216	0.32	+0.1
4,729,286	-		PfGW456L13_4216	0.32	+1.3
4,729,286	-		PfGW456L13_4216	0.32	-0.2
4,729,286	-		PfGW456L13_4216	0.32	-0.8
4,729,286	-		PfGW456L13_4216	0.32	-3.5
4,729,286	-		PfGW456L13_4216	0.32	+1.3
4,729,286	-		PfGW456L13_4216	0.32	-0.9
4,729,287	+		PfGW456L13_4216	0.32	+0.0
4,729,287	+		PfGW456L13_4216	0.32	-0.2
4,729,288	-		PfGW456L13_4216	0.33	-2.3
4,729,288	-		PfGW456L13_4216	0.33	-0.8
4,729,906	+				-0.0
4,729,906	+				+0.6
4,729,906	+				-1.5
4,729,906	+				-0.6
4,729,907	-				-3.1
4,729,907	-				+0.9
4,729,907	-				+1.8
4,729,923	+				+1.8
4,729,923	+				-0.2
4,729,924	-				-5.7
4,729,928	+				+0.5
4,729,928	+				-2.4
4,729,928	+				+0.7
4,729,928	+				-2.7
4,729,929	-				-1.9
4,729,929	-				-3.7
4,729,929	-				-3.3
4,729,929	-				+1.1
4,729,929	-				-2.6
4,729,929	-				+0.1
4,729,929	-				+0.6
4,730,004	+				-0.7
4,730,029	-				+0.5
4,730,029	-				-0.1
4,730,029	-				-1.4
4,730,065	+				-1.0
4,730,065	+				+0.7
4,730,065	+				+1.2
4,730,066	-				-2.1
4,730,094	+				+0.6
4,730,095	-				-2.9
4,730,767	-		PfGW456L13_4217	0.75	-3.7
4,730,767	-		PfGW456L13_4217	0.75	-1.9
4,730,949	+				-1.8
4,730,950	-				+0.0
4,731,005	+				-0.7
4,731,005	+				+0.2
4,731,006	-				+1.3
4,731,006	-				+1.3
4,731,006	-				+0.9
4,731,048	-				+0.5
4,731,060	+				+1.0
4,731,060	+				+1.2
4,731,060	+				+2.3
4,731,060	+				+0.6
4,731,060	+				-2.3
4,731,060	+				+0.9
4,731,060	+				-3.0
4,731,060	+				-4.0
4,731,060	+				+0.7
4,731,060	+				-1.3
4,731,060	+				+0.8
4,731,061	-				+0.8
4,731,061	-				-0.5
4,731,061	-				+0.8
4,731,061	-				+0.7
4,731,061	-				+0.4
4,731,061	-				-0.1
4,731,061	-				-0.5
4,731,061	-				+1.1
4,731,061	-				-1.7
4,731,061	-				-0.4
4,731,061	-				+1.1
4,731,062	+				-0.1
4,731,062	+				+1.7
4,731,062	+				-0.3
4,731,062	+				+1.5
4,731,062	+				+0.9
4,731,062	+				-0.5
4,731,062	+				+0.5
4,731,062	+				+1.3
4,731,062	+				-0.2
4,731,062	+				+0.3
4,731,062	+				-3.8
4,731,063	-				-0.1
4,731,063	-				-0.5
4,731,063	-				+0.6
4,731,063	-				+1.7
4,731,105	+				+0.3
4,731,106	-				-0.8
4,731,106	-				-3.4
4,731,206	+		PfGW456L13_4218	0.20	+1.5
4,731,318	-		PfGW456L13_4218	0.56	+0.5
4,731,585	+				+1.9
4,731,841	+		PfGW456L13_4219	0.14	-0.6
4,731,842	-		PfGW456L13_4219	0.14	-0.6
4,731,883	-		PfGW456L13_4219	0.16	+2.2
4,731,912	+		PfGW456L13_4219	0.17	-0.4
4,731,912	+		PfGW456L13_4219	0.17	-1.6
4,731,912	+		PfGW456L13_4219	0.17	-0.3
4,731,912	+		PfGW456L13_4219	0.17	+0.2
4,731,912	+		PfGW456L13_4219	0.17	-2.4
4,731,912	+		PfGW456L13_4219	0.17	+0.8
4,731,912	+		PfGW456L13_4219	0.17	-1.4
4,731,912	+		PfGW456L13_4219	0.17	-3.9
4,731,913	-		PfGW456L13_4219	0.18	-1.0
4,731,913	-		PfGW456L13_4219	0.18	+0.6
4,731,913	-		PfGW456L13_4219	0.18	+0.6
4,731,913	-		PfGW456L13_4219	0.18	-1.3
4,731,913	-		PfGW456L13_4219	0.18	+1.1
4,731,913	-		PfGW456L13_4219	0.18	+0.1
4,731,913	-		PfGW456L13_4219	0.18	+2.3
4,731,913	-				-0.3
4,731,913	-		PfGW456L13_4219	0.18	+0.4
4,731,913	-		PfGW456L13_4219	0.18	+1.2
4,731,913	-		PfGW456L13_4219	0.18	-2.0
4,731,913	-		PfGW456L13_4219	0.18	+0.5
4,731,913	-		PfGW456L13_4219	0.18	+0.1
4,731,913	-		PfGW456L13_4219	0.18	+0.5
4,731,913	-		PfGW456L13_4219	0.18	-2.6
4,731,914	+		PfGW456L13_4219	0.18	+1.0
4,731,914	+		PfGW456L13_4219	0.18	-1.7
4,731,914	+		PfGW456L13_4219	0.18	+0.2
4,731,914	+		PfGW456L13_4219	0.18	-1.8
4,731,914	+		PfGW456L13_4219	0.18	-0.1
4,731,914	+		PfGW456L13_4219	0.18	+0.4
4,731,914	+		PfGW456L13_4219	0.18	+0.2
4,731,914	+		PfGW456L13_4219	0.18	-4.1
4,731,914	+		PfGW456L13_4219	0.18	+0.6
4,731,914	+		PfGW456L13_4219	0.18	-2.1
4,731,915	-		PfGW456L13_4219	0.18	-3.8
4,731,915	-		PfGW456L13_4219	0.18	+1.7
4,731,915	-		PfGW456L13_4219	0.18	+1.8
4,731,915	-		PfGW456L13_4219	0.18	-1.2
4,731,915	-		PfGW456L13_4219	0.18	+0.9
4,731,915	-		PfGW456L13_4219	0.18	-2.9
4,731,993	+		PfGW456L13_4219	0.22	-3.7
4,731,993	+		PfGW456L13_4219	0.22	-1.7
4,731,993	+		PfGW456L13_4219	0.22	+0.3
4,731,993	+		PfGW456L13_4219	0.22	+1.8
4,731,994	-		PfGW456L13_4219	0.22	-0.0
4,731,994	-		PfGW456L13_4219	0.22	-1.1
4,732,002	+		PfGW456L13_4219	0.22	+0.6
4,732,002	+		PfGW456L13_4219	0.22	+1.2
4,732,002	+		PfGW456L13_4219	0.22	-2.6
4,732,002	+		PfGW456L13_4219	0.22	-0.8
4,732,002	+		PfGW456L13_4219	0.22	-2.6
4,732,002	+		PfGW456L13_4219	0.22	-2.3
4,732,002	+		PfGW456L13_4219	0.22	+0.9
4,732,003	-		PfGW456L13_4219	0.22	+1.4
4,732,003	-		PfGW456L13_4219	0.22	+1.6
4,732,003	-		PfGW456L13_4219	0.22	-0.5
4,732,003	-		PfGW456L13_4219	0.22	+0.9
4,732,005	+		PfGW456L13_4219	0.22	+1.0
4,732,005	+		PfGW456L13_4219	0.22	-0.3
4,732,005	+		PfGW456L13_4219	0.22	-1.5
4,732,005	+		PfGW456L13_4219	0.22	+0.4
4,732,005	+		PfGW456L13_4219	0.22	+0.1
4,732,005	+		PfGW456L13_4219	0.22	-2.8
4,732,005	+		PfGW456L13_4219	0.22	-0.4
4,732,005	+		PfGW456L13_4219	0.22	-2.8
4,732,005	+		PfGW456L13_4219	0.22	+0.7
4,732,005	+		PfGW456L13_4219	0.22	+1.7
4,732,005	+		PfGW456L13_4219	0.22	-1.8
4,732,005	+		PfGW456L13_4219	0.22	+0.6
4,732,005	+		PfGW456L13_4219	0.22	+0.6
4,732,006	-		PfGW456L13_4219	0.23	+1.1
4,732,006	-		PfGW456L13_4219	0.23	-0.9
4,732,006	-		PfGW456L13_4219	0.23	-0.4
4,732,006	-		PfGW456L13_4219	0.23	-2.7
4,732,006	-		PfGW456L13_4219	0.23	+0.9
4,732,006	-		PfGW456L13_4219	0.23	+0.0