Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4116

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
4,629,199	+		PfGW456L13_4115	0.27	-2.0
4,629,200	-		PfGW456L13_4115	0.27	-0.7
4,629,203	+		PfGW456L13_4115	0.28	+0.8
4,629,203	+		PfGW456L13_4115	0.28	+1.4
4,629,204	-		PfGW456L13_4115	0.28	+1.1
4,629,204	-		PfGW456L13_4115	0.28	+2.1
4,629,204	-		PfGW456L13_4115	0.28	-0.8
4,629,412	-		PfGW456L13_4115	0.45	-1.5
4,629,412	-		PfGW456L13_4115	0.45	+0.1
4,629,598	+		PfGW456L13_4115	0.61	+0.1
4,629,599	-		PfGW456L13_4115	0.61	+0.9
4,629,810	-		PfGW456L13_4115	0.79	-0.5
4,629,810	-		PfGW456L13_4115	0.79	-3.6
4,629,810	-		PfGW456L13_4115	0.79	+0.2
4,630,028	+				-3.2
4,630,028	+				+2.1
4,630,028	+				+0.4
4,630,028	+				-0.4
4,630,028	+				-0.7
4,630,028	+				+1.5
4,630,028	+				-2.5
4,630,028	+				-2.4
4,630,028	+				+0.2
4,630,028	+				-0.5
4,630,028	+				-0.3
4,630,028	+				+1.6
4,630,028	+				+0.3
4,630,028	+				+0.7
4,630,029	-				-0.7
4,630,029	-				+0.7
4,630,029	-				+0.1
4,630,029	-				+1.0
4,630,029	-				-0.8
4,630,029	-				+0.8
4,630,029	-				+1.0
4,630,029	-				+0.3
4,630,029	-				+0.3
4,630,029	-				-0.6
4,630,029	-				+0.6
4,630,029	-				+0.1
4,630,029	-				-2.9
4,630,029	-				-2.7
4,630,029	-				+1.9
4,630,029	-				-1.0
4,630,029	-				-0.0
4,630,029	-				+1.9
4,630,029	-				-0.1
4,630,105	+				-0.4
4,630,106	-				-0.2
4,630,106	-				-0.9
4,630,133	+				-1.1
4,630,134	-				+0.8
4,630,199	+				-0.1
4,630,199	+				+1.3
4,630,323	-				-4.2
4,630,323	-				-0.9
4,630,506	-		PfGW456L13_4116	0.14	-4.9
4,630,550	+		PfGW456L13_4116	0.16	-2.4
4,630,550	+		PfGW456L13_4116	0.16	+0.1
4,630,550	+		PfGW456L13_4116	0.16	-2.6
4,630,550	+		PfGW456L13_4116	0.16	-0.9
4,630,550	+		PfGW456L13_4116	0.16	-0.9
4,630,551	-				-2.2
4,630,551	-		PfGW456L13_4116	0.16	-2.5
4,630,551	-		PfGW456L13_4116	0.16	-3.8
4,630,551	-		PfGW456L13_4116	0.16	-0.7
4,630,551	-		PfGW456L13_4116	0.16	+1.1
4,630,551	-		PfGW456L13_4116	0.16	+1.0
4,630,551	-		PfGW456L13_4116	0.16	+1.1
4,630,551	-		PfGW456L13_4116	0.16	-2.6
4,630,551	-		PfGW456L13_4116	0.16	+0.7
4,630,551	-		PfGW456L13_4116	0.16	+1.6
4,630,551	-		PfGW456L13_4116	0.16	-0.7
4,630,551	-		PfGW456L13_4116	0.16	-0.0
4,630,715	+		PfGW456L13_4116	0.22	+1.8
4,630,716	-		PfGW456L13_4116	0.23	+1.3
4,630,716	-		PfGW456L13_4116	0.23	-0.5
4,630,757	+		PfGW456L13_4116	0.24	-2.0
4,630,757	+		PfGW456L13_4116	0.24	+0.4
4,630,758	-		PfGW456L13_4116	0.24	-0.8
4,630,758	-		PfGW456L13_4116	0.24	+0.6
4,630,907	+		PfGW456L13_4116	0.30	-1.8
4,630,908	-		PfGW456L13_4116	0.30	+0.5
4,630,908	-		PfGW456L13_4116	0.30	+0.3
4,630,908	-		PfGW456L13_4116	0.30	-0.3
4,630,932	-		PfGW456L13_4116	0.31	-0.7
4,630,932	-		PfGW456L13_4116	0.31	+1.5
4,630,932	-		PfGW456L13_4116	0.31	-0.2
4,630,985	+		PfGW456L13_4116	0.33	+1.9
4,630,986	-		PfGW456L13_4116	0.33	-4.1
4,630,986	-		PfGW456L13_4116	0.33	-2.7
4,630,986	-		PfGW456L13_4116	0.33	-1.8
4,631,141	+		PfGW456L13_4116	0.39	-1.8
4,631,142	-		PfGW456L13_4116	0.39	-0.3
4,631,241	-		PfGW456L13_4116	0.43	+0.5
4,631,378	+		PfGW456L13_4116	0.48	-2.9
4,631,379	-		PfGW456L13_4116	0.48	+0.7
4,631,583	+		PfGW456L13_4116	0.56	-0.2
4,631,584	-		PfGW456L13_4116	0.56	-3.1
4,631,735	+		PfGW456L13_4116	0.62	-3.7
4,631,735	+		PfGW456L13_4116	0.62	+2.3
4,631,736	-		PfGW456L13_4116	0.62	+1.2
4,631,736	-		PfGW456L13_4116	0.62	+1.1
4,631,736	-		PfGW456L13_4116	0.62	+2.3
4,631,787	-		PfGW456L13_4116	0.64	+0.1
4,631,787	-		PfGW456L13_4116	0.64	+1.8
4,631,810	+		PfGW456L13_4116	0.65	+2.1
4,631,810	+		PfGW456L13_4116	0.65	+1.2
4,631,810	+		PfGW456L13_4116	0.65	-1.8
4,631,810	+		PfGW456L13_4116	0.65	-1.9
4,631,811	-		PfGW456L13_4116	0.65	-2.0
4,631,811	-		PfGW456L13_4116	0.65	-0.9
4,631,811	-		PfGW456L13_4116	0.65	+2.4
4,631,835	-		PfGW456L13_4116	0.66	+0.3
4,631,851	-		PfGW456L13_4116	0.66	-0.6
4,631,851	-		PfGW456L13_4116	0.66	-3.1
4,632,055	+		PfGW456L13_4116	0.74	+1.2
4,632,056	-		PfGW456L13_4116	0.74	+1.2
4,632,145	-		PfGW456L13_4116	0.78	-2.8
4,632,145	-		PfGW456L13_4116	0.78	+2.0
4,632,145	-		PfGW456L13_4116	0.78	-1.2
4,632,145	-		PfGW456L13_4116	0.78	-1.5
4,632,608	-				+0.3
4,632,608	-				-4.3
4,632,620	+				-3.1
4,632,620	+				-2.2
4,632,621	-				-2.9
4,632,621	-				+0.0
4,632,621	-				-3.4
4,632,681	-				+1.1
4,632,747	-				+0.1
4,632,747	-				+0.8
4,632,750	+				+1.2
4,632,750	+				+1.2
4,632,750	+				-3.2
4,632,751	-				+1.8
4,632,876	+				+0.3
4,632,877	-				+2.5
4,632,941	+				-0.3
4,632,969	+				-0.5
4,632,969	+				+2.2
4,632,970	-				-0.8
4,633,014	+				+1.4
4,633,014	+				+0.7
4,633,015	-				+1.0
4,633,095	+		PfGW456L13_4117	0.15	+1.2
4,633,110	+		PfGW456L13_4117	0.17	+0.2
4,633,110	+		PfGW456L13_4117	0.17	+0.6
4,633,110	+		PfGW456L13_4117	0.17	+1.4
4,633,110	+		PfGW456L13_4117	0.17	+1.3
4,633,110	+		PfGW456L13_4117	0.17	+0.4
4,633,111	-		PfGW456L13_4117	0.17	-1.5
4,633,111	-		PfGW456L13_4117	0.17	-1.6
4,633,259	-		PfGW456L13_4117	0.30	-0.3
4,633,260	+		PfGW456L13_4117	0.30	-0.6
4,633,260	+		PfGW456L13_4117	0.30	+1.0
4,633,260	+		PfGW456L13_4117	0.30	-2.9
4,633,260	+		PfGW456L13_4117	0.30	-1.6
4,633,260	+		PfGW456L13_4117	0.30	-0.2
4,633,260	+				-1.5
4,633,260	+		PfGW456L13_4117	0.30	-3.3
4,633,261	-		PfGW456L13_4117	0.30	+0.8
4,633,261	-		PfGW456L13_4117	0.30	+1.5
4,633,261	-		PfGW456L13_4117	0.30	+1.1
4,633,261	-		PfGW456L13_4117	0.30	-0.6
4,633,261	-		PfGW456L13_4117	0.30	-0.1
4,633,261	-		PfGW456L13_4117	0.30	-2.5
4,633,261	-		PfGW456L13_4117	0.30	-2.5
4,633,261	-		PfGW456L13_4117	0.30	-3.4
4,633,431	+		PfGW456L13_4117	0.45	+0.1
4,633,432	-		PfGW456L13_4117	0.45	+0.4
4,633,644	+		PfGW456L13_4117	0.64	+0.9
4,633,644	+		PfGW456L13_4117	0.64	+0.8
4,633,644	+		PfGW456L13_4117	0.64	-3.4
4,633,644	+				-0.2
4,633,645	-		PfGW456L13_4117	0.64	-0.2
4,633,645	-		PfGW456L13_4117	0.64	-1.4
4,633,645	-		PfGW456L13_4117	0.64	+1.0
4,633,645	-		PfGW456L13_4117	0.64	+1.2
4,633,645	-		PfGW456L13_4117	0.64	+2.3