Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3985

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
4,469,228	+		PfGW456L13_3984	0.47	-0.5
4,469,228	+		PfGW456L13_3984	0.47	-0.3
4,469,229	-		PfGW456L13_3984	0.47	-2.1
4,469,229	-		PfGW456L13_3984	0.47	-1.8
4,469,229	-		PfGW456L13_3984	0.47	+0.7
4,469,230	+		PfGW456L13_3984	0.47	-3.4
4,469,230	+		PfGW456L13_3984	0.47	-1.4
4,469,230	+		PfGW456L13_3984	0.47	-1.7
4,469,230	+		PfGW456L13_3984	0.47	-0.2
4,469,230	+		PfGW456L13_3984	0.47	-3.3
4,469,230	+		PfGW456L13_3984	0.47	-3.6
4,469,230	+		PfGW456L13_3984	0.47	-4.4
4,469,230	+		PfGW456L13_3984	0.47	-1.5
4,469,230	+		PfGW456L13_3984	0.47	-2.3
4,469,230	+		PfGW456L13_3984	0.47	-2.8
4,469,230	+		PfGW456L13_3984	0.47	-2.1
4,469,230	+		PfGW456L13_3984	0.47	+0.6
4,469,230	+		PfGW456L13_3984	0.47	-4.2
4,469,230	+		PfGW456L13_3984	0.47	+0.7
4,469,230	+		PfGW456L13_3984	0.47	-1.3
4,469,231	-		PfGW456L13_3984	0.47	-1.7
4,469,231	-		PfGW456L13_3984	0.47	-3.0
4,469,231	-		PfGW456L13_3984	0.47	-2.5
4,469,231	-		PfGW456L13_3984	0.47	-1.8
4,469,231	-		PfGW456L13_3984	0.47	-2.6
4,469,231	-				-1.3
4,469,231	-		PfGW456L13_3984	0.47	-1.3
4,469,231	-		PfGW456L13_3984	0.47	-1.0
4,469,231	-		PfGW456L13_3984	0.47	-3.2
4,469,231	-		PfGW456L13_3984	0.47	-0.8
4,469,231	-				-0.3
4,469,231	-		PfGW456L13_3984	0.47	-2.6
4,469,231	-		PfGW456L13_3984	0.47	+0.2
4,469,231	-		PfGW456L13_3984	0.47	-2.3
4,469,231	-		PfGW456L13_3984	0.47	-1.2
4,469,231	-		PfGW456L13_3984	0.47	+0.0
4,469,231	-		PfGW456L13_3984	0.47	-3.3
4,469,231	-		PfGW456L13_3984	0.47	-1.8
4,469,231	-		PfGW456L13_3984	0.47	-3.3
4,469,231	-		PfGW456L13_3984	0.47	+0.8
4,469,318	-		PfGW456L13_3984	0.55	-2.7
4,469,332	+		PfGW456L13_3984	0.56	-2.4
4,469,332	+		PfGW456L13_3984	0.56	-0.4
4,469,332	+		PfGW456L13_3984	0.56	-4.1
4,469,332	+		PfGW456L13_3984	0.56	-1.6
4,469,372	+				-1.6
4,469,372	+		PfGW456L13_3984	0.59	-4.2
4,469,372	+		PfGW456L13_3984	0.59	+0.4
4,469,372	+		PfGW456L13_3984	0.59	-2.6
4,469,372	+		PfGW456L13_3984	0.59	-3.8
4,469,372	+		PfGW456L13_3984	0.59	-1.0
4,469,372	+		PfGW456L13_3984	0.59	+0.3
4,469,372	+		PfGW456L13_3984	0.59	-2.7
4,469,372	+		PfGW456L13_3984	0.59	-4.6
4,469,372	+		PfGW456L13_3984	0.59	-0.1
4,469,372	+		PfGW456L13_3984	0.59	-4.2
4,469,372	+		PfGW456L13_3984	0.59	-4.1
4,469,372	+		PfGW456L13_3984	0.59	-2.2
4,469,372	+		PfGW456L13_3984	0.59	-4.6
4,469,372	+		PfGW456L13_3984	0.59	-3.3
4,469,373	-		PfGW456L13_3984	0.60	-3.6
4,469,373	-		PfGW456L13_3984	0.60	-2.7
4,469,373	-		PfGW456L13_3984	0.60	-1.8
4,469,373	-		PfGW456L13_3984	0.60	+0.3
4,469,373	-		PfGW456L13_3984	0.60	+0.2
4,469,373	-		PfGW456L13_3984	0.60	-4.2
4,469,373	-		PfGW456L13_3984	0.60	-3.2
4,469,399	+		PfGW456L13_3984	0.62	-3.3
4,469,399	+		PfGW456L13_3984	0.62	-3.0
4,469,400	-		PfGW456L13_3984	0.62	-1.3
4,469,400	-		PfGW456L13_3984	0.62	-4.0
4,469,493	-		PfGW456L13_3984	0.70	-0.6
4,469,579	+		PfGW456L13_3984	0.78	-0.1
4,469,579	+		PfGW456L13_3984	0.78	-2.7
4,469,579	+		PfGW456L13_3984	0.78	+1.3
4,469,579	+		PfGW456L13_3984	0.78	-2.6
4,469,579	+		PfGW456L13_3984	0.78	-2.3
4,469,579	+		PfGW456L13_3984	0.78	-3.6
4,469,579	+		PfGW456L13_3984	0.78	-4.0
4,469,579	+		PfGW456L13_3984	0.78	+1.4
4,469,579	+		PfGW456L13_3984	0.78	-3.3
4,469,579	+		PfGW456L13_3984	0.78	-3.8
4,469,579	+		PfGW456L13_3984	0.78	+0.9
4,469,579	+		PfGW456L13_3984	0.78	-0.8
4,469,579	+		PfGW456L13_3984	0.78	-3.8
4,469,579	+		PfGW456L13_3984	0.78	-3.0
4,469,579	+		PfGW456L13_3984	0.78	-4.2
4,469,579	+		PfGW456L13_3984	0.78	+0.1
4,469,579	+		PfGW456L13_3984	0.78	-1.2
4,469,580	-		PfGW456L13_3984	0.78	-1.6
4,469,580	-		PfGW456L13_3984	0.78	-2.3
4,469,580	-		PfGW456L13_3984	0.78	+1.0
4,469,580	-		PfGW456L13_3984	0.78	+0.3
4,469,580	-		PfGW456L13_3984	0.78	-0.6
4,469,580	-		PfGW456L13_3984	0.78	-1.3
4,469,580	-		PfGW456L13_3984	0.78	-1.0
4,469,580	-		PfGW456L13_3984	0.78	-1.2
4,469,580	-		PfGW456L13_3984	0.78	-0.7
4,469,580	-		PfGW456L13_3984	0.78	-3.1
4,469,580	-		PfGW456L13_3984	0.78	-1.5
4,469,580	-		PfGW456L13_3984	0.78	-0.1
4,469,580	-		PfGW456L13_3984	0.78	-3.1
4,469,580	-		PfGW456L13_3984	0.78	+1.1
4,469,580	-		PfGW456L13_3984	0.78	-1.3
4,469,580	-		PfGW456L13_3984	0.78	-2.7
4,469,580	-		PfGW456L13_3984	0.78	-2.3
4,469,580	-		PfGW456L13_3984	0.78	-1.7
4,469,580	-		PfGW456L13_3984	0.78	-0.3
4,469,580	-		PfGW456L13_3984	0.78	-1.4
4,469,580	-		PfGW456L13_3984	0.78	-2.3
4,469,582	+		PfGW456L13_3984	0.78	-0.3
4,469,582	+		PfGW456L13_3984	0.78	-3.3
4,469,582	+		PfGW456L13_3984	0.78	-1.5
4,469,582	+		PfGW456L13_3984	0.78	-2.6
4,469,582	+		PfGW456L13_3984	0.78	-4.4
4,469,582	+		PfGW456L13_3984	0.78	-3.4
4,469,582	+		PfGW456L13_3984	0.78	-1.6
4,469,582	+		PfGW456L13_3984	0.78	-4.1
4,469,582	+		PfGW456L13_3984	0.78	-4.2
4,469,582	+		PfGW456L13_3984	0.78	+0.0
4,469,582	+		PfGW456L13_3984	0.78	-2.4
4,469,582	+		PfGW456L13_3984	0.78	-1.1
4,469,583	-		PfGW456L13_3984	0.78	-4.2
4,469,583	-		PfGW456L13_3984	0.78	-3.0
4,469,583	-		PfGW456L13_3984	0.78	-3.4
4,469,583	-		PfGW456L13_3984	0.78	+0.7
4,469,583	-		PfGW456L13_3984	0.78	+0.3
4,469,583	-		PfGW456L13_3984	0.78	-1.4
4,469,583	-		PfGW456L13_3984	0.78	-2.4
4,469,633	-		PfGW456L13_3984	0.82	-1.8
4,469,644	+		PfGW456L13_3984	0.83	-0.9
4,469,644	+		PfGW456L13_3984	0.83	-1.4
4,469,663	+		PfGW456L13_3984	0.85	-3.6
4,469,663	+		PfGW456L13_3984	0.85	-2.8
4,469,663	+		PfGW456L13_3984	0.85	-0.3
4,469,663	+		PfGW456L13_3984	0.85	-3.1
4,469,663	+		PfGW456L13_3984	0.85	+0.2
4,469,663	+		PfGW456L13_3984	0.85	-3.8
4,469,664	-		PfGW456L13_3984	0.85	-0.4
4,469,664	-		PfGW456L13_3984	0.85	-3.5
4,469,664	-		PfGW456L13_3984	0.85	-1.5
4,469,668	-		PfGW456L13_3984	0.85	-2.7
4,469,728	+				-3.6
4,469,728	+				-1.3
4,469,728	+				-2.8
4,469,728	+				-0.5
4,469,728	+				-1.9
4,469,728	+				-2.8
4,469,729	-				-2.9
4,469,729	-				-2.1
4,469,729	-				-1.8
4,469,729	-				-2.6
4,469,800	+				-3.1
4,469,815	-				-4.3
4,469,904	+				-2.4
4,469,904	+				-3.1
4,469,905	-				-0.1
4,469,905	-				-1.3
4,469,907	-				+1.1
4,469,919	-				-0.1
4,469,922	+				-0.5
4,469,932	-				-2.3
4,469,948	-				-3.3
4,469,948	-				+1.4
4,470,073	+				+0.0
4,470,074	-				-0.8
4,470,160	-				-2.6
4,470,179	+				+1.2
4,470,419	+		PfGW456L13_3985	0.12	-4.1
4,470,425	-		PfGW456L13_3985	0.13	+1.0
4,470,437	+		PfGW456L13_3985	0.13	-2.6
4,470,437	+		PfGW456L13_3985	0.13	-0.7
4,470,454	+		PfGW456L13_3985	0.14	-0.7
4,470,454	+		PfGW456L13_3985	0.14	-3.1
4,470,455	-		PfGW456L13_3985	0.14	+0.5
4,470,614	+		PfGW456L13_3985	0.24	-3.0
4,470,615	-		PfGW456L13_3985	0.24	-0.1
4,470,615	-		PfGW456L13_3985	0.24	-1.5
4,470,619	+		PfGW456L13_3985	0.24	-0.5
4,470,620	-		PfGW456L13_3985	0.25	+0.5
4,470,770	-		PfGW456L13_3985	0.34	-0.8
4,470,793	+		PfGW456L13_3985	0.35	-3.0
4,470,793	+		PfGW456L13_3985	0.35	-1.6
4,470,793	+		PfGW456L13_3985	0.35	-0.7
4,470,794	-		PfGW456L13_3985	0.35	-3.3
4,470,794	-		PfGW456L13_3985	0.35	-1.0
4,470,794	-		PfGW456L13_3985	0.35	-2.6
4,470,794	-		PfGW456L13_3985	0.35	-2.4
4,470,838	+		PfGW456L13_3985	0.38	-2.4
4,470,838	+		PfGW456L13_3985	0.38	-0.8
4,470,838	+		PfGW456L13_3985	0.38	+0.1
4,470,839	-		PfGW456L13_3985	0.38	-2.6
4,470,839	-		PfGW456L13_3985	0.38	-3.0
4,470,839	-		PfGW456L13_3985	0.38	-0.2
4,470,904	+		PfGW456L13_3985	0.42	-1.1
4,470,904	+		PfGW456L13_3985	0.42	-2.4
4,471,022	-		PfGW456L13_3985	0.49	-2.2
4,471,058	+		PfGW456L13_3985	0.51	-0.7
4,471,059	-				-1.3
4,471,071	+		PfGW456L13_3985	0.52	-3.4
4,471,132	+		PfGW456L13_3985	0.56	-2.3
4,471,151	-		PfGW456L13_3985	0.57	-1.1
4,471,190	+		PfGW456L13_3985	0.59	-0.3
4,471,202	+		PfGW456L13_3985	0.60	-3.4
4,471,313	-		PfGW456L13_3985	0.67	-3.1
4,471,313	-		PfGW456L13_3985	0.67	-0.8
4,471,397	+		PfGW456L13_3985	0.72	-2.4
4,471,398	-		PfGW456L13_3985	0.72	-2.4
4,471,437	+		PfGW456L13_3985	0.74	-2.4
4,471,437	+		PfGW456L13_3985	0.74	-3.1
4,471,438	-		PfGW456L13_3985	0.74	-2.6
4,471,438	-		PfGW456L13_3985	0.74	+0.4
4,471,460	+		PfGW456L13_3985	0.76	-3.4
4,471,461	-		PfGW456L13_3985	0.76	-3.2
4,471,461	-		PfGW456L13_3985	0.76	-2.2
4,471,597	-		PfGW456L13_3985	0.84	-1.3
4,471,597	-		PfGW456L13_3985	0.84	-0.4
4,471,597	-		PfGW456L13_3985	0.84	-4.0
4,471,625	+		PfGW456L13_3985	0.86	-0.3
4,471,626	-		PfGW456L13_3985	0.86	-2.2
4,471,642	+		PfGW456L13_3985	0.87	-1.6
4,471,642	+		PfGW456L13_3985	0.87	-0.8
4,471,642	+		PfGW456L13_3985	0.87	-2.6
4,471,642	+		PfGW456L13_3985	0.87	-3.6
4,471,642	+		PfGW456L13_3985	0.87	-3.6
4,471,643	-		PfGW456L13_3985	0.87	-1.5
4,471,643	-		PfGW456L13_3985	0.87	-1.9
4,471,643	-		PfGW456L13_3985	0.87	+0.2
4,471,684	+		PfGW456L13_3985	0.89	-4.2
4,471,684	+		PfGW456L13_3985	0.89	-1.9
4,471,684	+		PfGW456L13_3985	0.89	-0.4
4,471,684	+		PfGW456L13_3985	0.89	-1.0
4,471,684	+		PfGW456L13_3985	0.89	-1.5
4,471,684	+		PfGW456L13_3985	0.89	-0.5
4,471,684	+		PfGW456L13_3985	0.89	-1.4
4,471,684	+		PfGW456L13_3985	0.89	-3.1
4,471,684	+		PfGW456L13_3985	0.89	-1.8
4,471,684	+		PfGW456L13_3985	0.89	-2.3
4,471,684	+		PfGW456L13_3985	0.89	-3.4
4,471,684	+		PfGW456L13_3985	0.89	-3.3
4,471,684	+		PfGW456L13_3985	0.89	-1.6
4,471,684	+		PfGW456L13_3985	0.89	-0.1
4,471,684	+		PfGW456L13_3985	0.89	-3.9
4,471,684	+		PfGW456L13_3985	0.89	-2.7
4,471,685	-		PfGW456L13_3985	0.89	-1.6
4,471,685	-		PfGW456L13_3985	0.89	-4.4
4,471,685	-		PfGW456L13_3985	0.89	-4.0
4,471,685	-		PfGW456L13_3985	0.89	-0.4
4,471,685	-		PfGW456L13_3985	0.89	-1.4
4,471,685	-		PfGW456L13_3985	0.89	+0.3
4,471,685	-		PfGW456L13_3985	0.89	-0.7
4,471,685	-		PfGW456L13_3985	0.89	-2.5
4,471,685	-		PfGW456L13_3985	0.89	-2.1
4,471,756	-				+0.0
4,471,862	+				-3.3
4,471,877	+		PfGW456L13_3986	0.12	+2.0
4,471,877	+		PfGW456L13_3986	0.12	+1.7
4,472,059	+		PfGW456L13_3986	0.73	-0.1
4,472,059	+		PfGW456L13_3986	0.73	+1.0
4,472,059	+		PfGW456L13_3986	0.73	+1.0
4,472,060	-		PfGW456L13_3986	0.74	+0.0
4,472,092	-		PfGW456L13_3986	0.85	-3.3
4,472,092	-		PfGW456L13_3986	0.85	-0.5
4,472,092	-		PfGW456L13_3986	0.85	-2.7
4,472,092	-		PfGW456L13_3986	0.85	-0.6
4,472,148	-				+1.1
4,472,168	+				-2.6
4,472,168	+				-1.3
4,472,168	+				-1.5
4,472,168	+				+1.2
4,472,168	+				-4.0
4,472,168	+				+0.1
4,472,168	+				-2.1
4,472,168	+				-3.7
4,472,168	+				-0.2
4,472,168	+				-0.5
4,472,168	+				+0.5
4,472,168	+				+0.6
4,472,169	-				-0.0
4,472,169	-				-0.7
4,472,169	-				+0.2
4,472,169	-				+0.9
4,472,169	-				+1.2
4,472,169	-				+0.7
4,472,169	-				+1.5
4,472,169	-				+1.8
4,472,169	-				-3.1
4,472,172	+				-0.1
4,472,172	+				+1.1
4,472,172	+				+0.3
4,472,172	+				-3.1
4,472,172	+				+0.5
4,472,172	+				+1.4
4,472,172	+				-3.3
4,472,172	+				-1.4
4,472,172	+				-3.8
4,472,172	+				-1.5
4,472,172	+				+2.0
4,472,172	+				+0.9
4,472,172	+				-2.4
4,472,172	+				+0.7
4,472,172	+				-2.1
4,472,173	-				-1.9
4,472,173	-				+0.9
4,472,173	-				-1.0
4,472,173	-				+2.3
4,472,173	-				-1.9
4,472,173	-				-0.8
4,472,173	-				+1.2
4,472,173	-				-2.8
4,472,173	-				-3.0
4,472,173	-				+2.4
4,472,173	-				+1.4
4,472,173	-				+0.4
4,472,173	-				-1.5
4,472,173	-				+0.7
4,472,192	+				+0.6
4,472,193	-				+1.0
4,472,196	-				-1.7
4,472,212	-				+0.5
4,472,232	+				+2.4
4,472,232	+				+1.5
4,472,233	-				-1.8
4,472,233	-				+1.7
4,472,233	-				-1.8
4,472,233	-				-0.5
4,472,236	+				-5.0
4,472,236	+				-2.7
4,472,236	+				+1.2
4,472,236	+				-1.1
4,472,237	-				+0.5
4,472,237	-				-0.0
4,472,237	-				-2.3
4,472,237	-				+1.1
4,472,328	+				+1.0
4,472,329	-				-1.8
4,472,354	+				+0.9
4,472,355	-				-1.5
4,472,355	-				-1.1
4,472,355	-				+1.2
4,472,377	+				-3.3
4,472,378	-				-2.3
4,472,378	-				-2.4
4,472,531	-		PfGW456L13_3987	0.20	-1.6
4,472,583	+		PfGW456L13_3987	0.25	-2.6
4,472,583	+		PfGW456L13_3987	0.25	-3.8
4,472,583	+		PfGW456L13_3987	0.25	+0.2
4,472,583	+		PfGW456L13_3987	0.25	+0.8
4,472,584	-		PfGW456L13_3987	0.26	-3.7
4,472,584	-		PfGW456L13_3987	0.26	+0.4
4,472,584	-		PfGW456L13_3987	0.26	-1.2
4,472,707	+		PfGW456L13_3987	0.39	+0.1
4,472,707	+		PfGW456L13_3987	0.39	+0.6
4,472,763	+		PfGW456L13_3987	0.46	+0.2
4,472,764	-		PfGW456L13_3987	0.46	-4.5
4,472,836	+		PfGW456L13_3987	0.54	-3.2
4,472,836	+		PfGW456L13_3987	0.54	+1.0