Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3374

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
3,785,391	+				-0.7
3,785,391	+				+1.3
3,785,393	+				-2.2
3,785,394	-				+0.8
3,785,394	-				-3.5
3,785,394	-				+1.1
3,785,394	-				+0.4
3,785,394	-				+0.2
3,785,394	-				-1.9
3,785,394	-				-1.6
3,785,402	+				+1.3
3,785,416	+				+0.3
3,785,416	+				+0.4
3,785,610	-		PfGW456L13_3372	0.88	-0.1
3,785,610	-		PfGW456L13_3372	0.88	-1.7
3,785,610	-		PfGW456L13_3372	0.88	-0.4
3,785,616	+				+0.3
3,785,616	+				-1.5
3,785,623	+				+0.1
3,785,623	+				+0.4
3,785,623	+				-0.3
3,785,624	-				-2.2
3,785,624	-				+1.5
3,785,624	-				+1.0
3,785,637	+				+0.7
3,785,727	-		PfGW456L13_3373	0.13	-0.6
3,785,744	+		PfGW456L13_3373	0.16	+0.6
3,785,744	+		PfGW456L13_3373	0.16	-1.9
3,785,745	-		PfGW456L13_3373	0.17	-0.3
3,785,849	+		PfGW456L13_3373	0.38	-0.0
3,785,849	+		PfGW456L13_3373	0.38	+0.0
3,785,849	+		PfGW456L13_3373	0.38	-4.1
3,786,098	+		PfGW456L13_3373	0.88	-3.7
3,786,099	-		PfGW456L13_3373	0.88	-0.5
3,786,449	-				-0.3
3,786,470	+				+0.5
3,786,470	+				-3.5
3,786,470	+				-1.6
3,786,471	-				-2.8
3,786,471	-				+0.9
3,786,471	-				-0.5
3,786,629	+		PfGW456L13_3374	0.16	-4.6
3,786,629	+		PfGW456L13_3374	0.16	+0.3
3,786,630	-		PfGW456L13_3374	0.16	-0.9
3,786,630	-		PfGW456L13_3374	0.16	-2.9
3,786,719	+		PfGW456L13_3374	0.20	+1.9
3,786,720	-		PfGW456L13_3374	0.20	+2.0
3,786,975	-		PfGW456L13_3374	0.32	-3.4
3,786,975	-		PfGW456L13_3374	0.32	+3.5
3,786,975	-		PfGW456L13_3374	0.32	-1.0
3,786,975	-		PfGW456L13_3374	0.32	-1.0
3,786,975	-		PfGW456L13_3374	0.32	+0.8
3,786,992	+		PfGW456L13_3374	0.33	-0.2
3,786,993	-		PfGW456L13_3374	0.33	-3.7
3,786,993	-		PfGW456L13_3374	0.33	+1.4
3,787,004	+		PfGW456L13_3374	0.33	+1.2
3,787,005	-		PfGW456L13_3374	0.33	+2.3
3,787,005	-		PfGW456L13_3374	0.33	+0.6
3,787,028	+		PfGW456L13_3374	0.34	+0.5
3,787,029	-		PfGW456L13_3374	0.34	+0.7
3,787,133	+		PfGW456L13_3374	0.39	+1.6
3,787,134	-		PfGW456L13_3374	0.39	-0.1
3,787,220	+		PfGW456L13_3374	0.43	+0.6
3,787,220	+		PfGW456L13_3374	0.43	+1.2
3,787,220	+		PfGW456L13_3374	0.43	-2.3
3,787,221	-		PfGW456L13_3374	0.43	-0.3
3,787,221	-		PfGW456L13_3374	0.43	-1.2
3,787,221	-		PfGW456L13_3374	0.43	+1.0
3,787,221	-		PfGW456L13_3374	0.43	-0.7
3,787,221	-		PfGW456L13_3374	0.43	+2.3
3,787,541	+		PfGW456L13_3374	0.57	-2.7
3,787,542	-		PfGW456L13_3374	0.57	+1.2
3,787,542	-		PfGW456L13_3374	0.57	+1.3
3,787,542	-		PfGW456L13_3374	0.57	+1.2
3,787,592	+		PfGW456L13_3374	0.59	+0.4
3,787,592	+		PfGW456L13_3374	0.59	-2.6
3,787,592	+		PfGW456L13_3374	0.59	+0.3
3,787,593	-		PfGW456L13_3374	0.59	+1.0
3,787,622	+		PfGW456L13_3374	0.61	-0.2
3,787,622	+		PfGW456L13_3374	0.61	+0.6
3,787,623	-		PfGW456L13_3374	0.61	+2.1
3,787,623	-		PfGW456L13_3374	0.61	+0.1
3,787,694	+		PfGW456L13_3374	0.64	+0.7
3,787,694	+		PfGW456L13_3374	0.64	+0.7
3,787,694	+		PfGW456L13_3374	0.64	-1.2
3,787,694	+		PfGW456L13_3374	0.64	-2.9
3,787,695	-		PfGW456L13_3374	0.64	+1.1
3,787,707	-		PfGW456L13_3374	0.64	+0.6
3,787,712	+		PfGW456L13_3374	0.65	+0.7
3,787,712	+		PfGW456L13_3374	0.65	-0.7
3,787,712	+				-0.6
3,787,713	-		PfGW456L13_3374	0.65	-4.0
3,787,713	-		PfGW456L13_3374	0.65	-1.9
3,787,713	-		PfGW456L13_3374	0.65	-0.2
3,787,751	+		PfGW456L13_3374	0.66	-0.4
3,787,751	+		PfGW456L13_3374	0.66	+1.0
3,787,752	-		PfGW456L13_3374	0.66	+0.2
3,787,779	-		PfGW456L13_3374	0.68	+0.6
3,787,794	-		PfGW456L13_3374	0.68	-0.1
3,787,811	+		PfGW456L13_3374	0.69	+1.7
3,787,811	+		PfGW456L13_3374	0.69	-1.3
3,787,811	+		PfGW456L13_3374	0.69	-4.1
3,787,811	+		PfGW456L13_3374	0.69	+1.0
3,787,812	-		PfGW456L13_3374	0.69	+0.5
3,787,812	-		PfGW456L13_3374	0.69	+1.6
3,787,812	-		PfGW456L13_3374	0.69	+0.6
3,787,812	-		PfGW456L13_3374	0.69	-1.1
3,787,812	-		PfGW456L13_3374	0.69	-0.7
3,787,812	-		PfGW456L13_3374	0.69	-0.4
3,787,812	-		PfGW456L13_3374	0.69	+1.5
3,787,812	-		PfGW456L13_3374	0.69	+0.1
3,787,821	-		PfGW456L13_3374	0.69	-0.5
3,787,830	-		PfGW456L13_3374	0.70	+0.6
3,787,830	-		PfGW456L13_3374	0.70	-2.1
3,787,830	-		PfGW456L13_3374	0.70	-0.6
3,787,841	+		PfGW456L13_3374	0.70	+2.4
3,787,841	+		PfGW456L13_3374	0.70	+1.1
3,787,841	+		PfGW456L13_3374	0.70	+0.4
3,787,841	+				-2.2
3,787,841	+		PfGW456L13_3374	0.70	+1.2
3,787,842	-		PfGW456L13_3374	0.70	+0.8
3,787,856	+		PfGW456L13_3374	0.71	+0.9
3,787,856	+		PfGW456L13_3374	0.71	+0.1
3,787,856	+		PfGW456L13_3374	0.71	-0.6
3,787,856	+		PfGW456L13_3374	0.71	-1.3
3,787,857	-		PfGW456L13_3374	0.71	+2.5
3,787,857	-		PfGW456L13_3374	0.71	-0.7
3,787,928	+		PfGW456L13_3374	0.74	-2.2
3,787,928	+		PfGW456L13_3374	0.74	+0.2
3,787,929	-		PfGW456L13_3374	0.74	-1.8
3,787,929	-		PfGW456L13_3374	0.74	+2.3
3,787,929	-		PfGW456L13_3374	0.74	-1.3
3,788,030	+		PfGW456L13_3374	0.79	-0.1
3,788,030	+		PfGW456L13_3374	0.79	+0.7
3,788,030	+		PfGW456L13_3374	0.79	-3.8
3,788,030	+		PfGW456L13_3374	0.79	-0.9
3,788,030	+		PfGW456L13_3374	0.79	-0.8
3,788,030	+		PfGW456L13_3374	0.79	-3.8
3,788,030	+		PfGW456L13_3374	0.79	+1.3
3,788,031	-		PfGW456L13_3374	0.79	-0.7
3,788,031	-		PfGW456L13_3374	0.79	-0.4
3,788,031	-		PfGW456L13_3374	0.79	+0.3
3,788,031	-		PfGW456L13_3374	0.79	-1.0
3,788,031	-		PfGW456L13_3374	0.79	+1.0
3,788,118	-		PfGW456L13_3374	0.83	+0.7
3,788,119	+		PfGW456L13_3374	0.83	-0.4
3,788,119	+		PfGW456L13_3374	0.83	+0.6
3,788,120	-		PfGW456L13_3374	0.83	+0.7
3,788,120	-		PfGW456L13_3374	0.83	-0.4
3,788,120	-		PfGW456L13_3374	0.83	-0.5
3,788,120	-		PfGW456L13_3374	0.83	-5.1
3,788,123	+		PfGW456L13_3374	0.83	+1.2
3,788,123	+		PfGW456L13_3374	0.83	-3.7
3,788,123	+		PfGW456L13_3374	0.83	+1.6
3,788,124	-		PfGW456L13_3374	0.83	+0.5
3,788,124	-		PfGW456L13_3374	0.83	+0.6
3,788,124	-		PfGW456L13_3374	0.83	+0.7
3,788,124	-		PfGW456L13_3374	0.83	+1.1
3,788,203	+		PfGW456L13_3374	0.86	-2.9
3,788,204	-		PfGW456L13_3374	0.86	+0.2
3,788,204	-		PfGW456L13_3374	0.86	-3.2
3,788,204	-		PfGW456L13_3374	0.86	-0.1
3,788,204	-		PfGW456L13_3374	0.86	+1.6
3,788,216	+		PfGW456L13_3374	0.87	-3.7
3,788,217	-		PfGW456L13_3374	0.87	+0.4
3,788,217	-		PfGW456L13_3374	0.87	+2.2
3,788,282	+		PfGW456L13_3374	0.90	+1.3
3,788,294	+				-0.2
3,788,294	+				+0.6
3,788,294	+				+0.5
3,788,294	+				-0.6
3,788,294	+				-0.7
3,788,294	+				+1.5
3,788,340	-				+1.1
3,788,459	+				+1.5
3,788,459	+				-0.2
3,788,459	+				-1.4
3,788,459	+				-0.2
3,788,459	+				+1.1
3,788,459	+				+0.6
3,788,459	+				-1.9
3,788,459	+				+0.9
3,788,459	+				-1.9
3,788,460	-				+0.4
3,788,460	-				-1.1
3,788,460	-				-2.7
3,788,462	+				+0.9
3,788,463	-				-1.9
3,788,463	-				-1.6
3,788,508	-				-1.0
3,788,534	+				+0.2
3,788,535	-				+0.3
3,788,535	-				+0.4
3,788,685	+				-1.9
3,788,786	+		PfGW456L13_3375	0.20	-2.2
3,788,802	-		PfGW456L13_3375	0.23	-1.6
3,788,843	+		PfGW456L13_3375	0.30	+0.7
3,788,843	+		PfGW456L13_3375	0.30	-1.1
3,788,844	-		PfGW456L13_3375	0.30	-0.3
3,788,844	-		PfGW456L13_3375	0.30	-0.4
3,788,844	-		PfGW456L13_3375	0.30	+0.5
3,789,119	+		PfGW456L13_3375	0.75	+1.0
3,789,119	+		PfGW456L13_3375	0.75	-0.4
3,789,120	-		PfGW456L13_3375	0.75	+0.3
3,789,287	+				+1.6
3,789,287	+				+1.0
3,789,287	+				-2.9
3,789,353	+				+0.9
3,789,353	+				-1.6
3,789,354	-				-0.9
3,789,386	+				+0.5
3,789,386	+				-1.9
3,789,386	+				+1.7
3,789,386	+				+0.5
3,789,386	+				+0.0
3,789,386	+				-2.7
3,789,386	+				-0.6
3,789,386	+				-3.5
3,789,386	+				+0.1
3,789,386	+				+0.6
3,789,386	+				-0.1
3,789,386	+				-1.0
3,789,386	+				-0.6
3,789,386	+				-1.6
3,789,386	+				+2.0
3,789,386	+				-3.2
3,789,386	+				+0.1
3,789,386	+				+0.2
3,789,387	-				-0.9
3,789,387	-				-0.7
3,789,387	-				-0.4
3,789,387	-				-3.2
3,789,387	-				-1.7
3,789,388	+				-0.0
3,789,388	+				+1.8
3,789,388	+				-2.2
3,789,388	+				+0.1
3,789,388	+				-0.6
3,789,388	+				-0.5
3,789,388	+				-3.6
3,789,388	+				+0.0
3,789,389	-				+0.8
3,789,389	-				-2.5
3,789,389	-				-0.6
3,789,389	-				-2.6
3,789,389	-				+0.9
3,789,389	-				-1.5
3,789,389	-				+0.7
3,789,389	-				-0.3
3,789,389	-				+0.5
3,789,389	-				+0.7
3,789,389	-				+1.8
3,789,389	-				+0.7
3,789,389	-				-0.2