Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2933

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
3,269,597	+		PfGW456L13_2932	0.49	-0.2
3,269,634	-		PfGW456L13_2932	0.51	+1.3
3,269,694	+		PfGW456L13_2932	0.55	+0.8
3,269,694	+		PfGW456L13_2932	0.55	-2.2
3,269,694	+		PfGW456L13_2932	0.55	+1.9
3,269,694	+		PfGW456L13_2932	0.55	-1.2
3,269,694	+		PfGW456L13_2932	0.55	+1.0
3,269,694	+		PfGW456L13_2932	0.55	-3.4
3,269,694	+		PfGW456L13_2932	0.55	+1.2
3,269,694	+		PfGW456L13_2932	0.55	+1.0
3,269,694	+		PfGW456L13_2932	0.55	+1.9
3,269,694	+		PfGW456L13_2932	0.55	+0.6
3,269,694	+		PfGW456L13_2932	0.55	+1.2
3,269,694	+		PfGW456L13_2932	0.55	+0.8
3,269,694	+		PfGW456L13_2932	0.55	+1.9
3,269,694	+		PfGW456L13_2932	0.55	-2.0
3,269,695	-		PfGW456L13_2932	0.55	-2.0
3,269,695	-		PfGW456L13_2932	0.55	+1.6
3,269,695	-		PfGW456L13_2932	0.55	-1.0
3,269,695	-		PfGW456L13_2932	0.55	+0.9
3,269,695	-		PfGW456L13_2932	0.55	-0.1
3,269,695	-		PfGW456L13_2932	0.55	-3.0
3,269,695	-		PfGW456L13_2932	0.55	+2.2
3,269,698	+		PfGW456L13_2932	0.56	-0.5
3,269,858	+		PfGW456L13_2932	0.66	+0.1
3,269,858	+		PfGW456L13_2932	0.66	+0.3
3,269,859	-		PfGW456L13_2932	0.66	+0.7
3,269,882	+		PfGW456L13_2932	0.68	+1.1
3,269,882	+		PfGW456L13_2932	0.68	+0.7
3,269,883	-		PfGW456L13_2932	0.68	+1.2
3,269,883	-		PfGW456L13_2932	0.68	+1.9
3,269,885	+		PfGW456L13_2932	0.68	+1.4
3,269,885	+		PfGW456L13_2932	0.68	+2.1
3,269,886	-		PfGW456L13_2932	0.68	+1.7
3,269,886	-		PfGW456L13_2932	0.68	+0.5
3,269,886	-		PfGW456L13_2932	0.68	-1.3
3,269,994	+		PfGW456L13_2932	0.75	+0.7
3,269,994	+		PfGW456L13_2932	0.75	-0.5
3,269,995	-		PfGW456L13_2932	0.75	+2.2
3,270,010	+		PfGW456L13_2932	0.76	-2.5
3,270,010	+		PfGW456L13_2932	0.76	+0.0
3,270,010	+		PfGW456L13_2932	0.76	+1.8
3,270,011	-		PfGW456L13_2932	0.76	+0.3
3,270,011	-		PfGW456L13_2932	0.76	+3.0
3,270,062	-		PfGW456L13_2932	0.79	-3.0
3,270,280	+				-2.0
3,270,280	+				-0.6
3,270,280	+				+0.9
3,270,281	-				-4.8
3,270,281	-				-0.5
3,270,281	-				-1.1
3,270,401	+				+1.1
3,270,401	+				-0.1
3,270,401	+				+0.7
3,270,401	+				-0.0
3,270,401	+				-1.1
3,270,401	+				+0.7
3,270,401	+				+0.9
3,270,401	+				-0.5
3,270,401	+				+0.9
3,270,401	+				+1.0
3,270,401	+				+0.6
3,270,401	+				+1.7
3,270,401	+				+0.8
3,270,401	+				-0.2
3,270,401	+				-0.6
3,270,401	+				-0.3
3,270,401	+				+0.8
3,270,401	+				+1.0
3,270,401	+				-0.1
3,270,402	-				+2.1
3,270,402	-				-3.5
3,270,402	-				-0.2
3,270,402	-				+0.4
3,270,402	-				+0.8
3,270,402	-				-0.6
3,270,402	-				-2.0
3,270,402	-				+0.7
3,270,402	-				-3.0
3,270,402	-				+2.0
3,270,402	-				+0.9
3,270,402	-				-0.1
3,270,402	-				+0.3
3,270,402	-				+0.6
3,270,402	-				-0.2
3,270,402	-				-1.9
3,270,402	-				-1.5
3,270,402	-				-0.0
3,270,464	+				-1.7
3,270,464	+				+0.8
3,270,464	+				+0.9
3,270,464	+				+0.1
3,270,464	+				-3.3
3,270,465	-				-2.9
3,270,465	-				-0.2
3,270,465	-				-3.4
3,270,465	-				-0.6
3,270,465	-				+0.5
3,270,465	-				+1.4
3,270,465	-				-1.5
3,270,465	-				-0.1
3,270,523	-				+0.1
3,270,919	+		PfGW456L13_2933	0.49	-4.4
3,270,920	-		PfGW456L13_2933	0.49	-4.2
3,270,964	+		PfGW456L13_2933	0.54	-1.6
3,270,965	-		PfGW456L13_2933	0.54	+0.5
3,271,089	+		PfGW456L13_2933	0.69	-4.9
3,271,284	+				+1.2
3,271,439	+				+0.3
3,271,440	-				+0.1
3,271,489	-				-1.2
3,271,545	+		PfGW456L13_2934	0.11	+0.9
3,271,570	+		PfGW456L13_2934	0.14	+1.2
3,271,623	-		PfGW456L13_2934	0.19	-0.5
3,271,623	-		PfGW456L13_2934	0.19	-3.2
3,271,624	+		PfGW456L13_2934	0.19	-1.7
3,271,624	+		PfGW456L13_2934	0.19	+0.4
3,271,625	-		PfGW456L13_2934	0.20	-4.2
3,271,625	-		PfGW456L13_2934	0.20	+0.1
3,271,702	+		PfGW456L13_2934	0.28	+2.1
3,271,728	+		PfGW456L13_2934	0.30	+1.4
3,271,728	+		PfGW456L13_2934	0.30	+0.1
3,271,728	+		PfGW456L13_2934	0.30	+0.3
3,271,728	+		PfGW456L13_2934	0.30	-2.5
3,271,740	+		PfGW456L13_2934	0.32	+0.5
3,271,740	+		PfGW456L13_2934	0.32	-3.5
3,271,740	+		PfGW456L13_2934	0.32	-0.8
3,271,740	+		PfGW456L13_2934	0.32	+1.5
3,271,740	+		PfGW456L13_2934	0.32	-2.3
3,271,740	+		PfGW456L13_2934	0.32	+0.6
3,271,740	+		PfGW456L13_2934	0.32	+0.7
3,271,741	-		PfGW456L13_2934	0.32	-2.5
3,271,741	-		PfGW456L13_2934	0.32	-0.1
3,271,741	-		PfGW456L13_2934	0.32	-0.7
3,271,741	-		PfGW456L13_2934	0.32	+0.9
3,271,741	-		PfGW456L13_2934	0.32	-3.2
3,271,741	-		PfGW456L13_2934	0.32	+1.1
3,271,906	+		PfGW456L13_2934	0.49	-0.2
3,271,906	+		PfGW456L13_2934	0.49	+1.2
3,271,907	-		PfGW456L13_2934	0.49	-0.4
3,271,907	-		PfGW456L13_2934	0.49	-2.1
3,271,907	-		PfGW456L13_2934	0.49	-0.0
3,271,978	-		PfGW456L13_2934	0.57	-3.0
3,272,034	+		PfGW456L13_2934	0.63	-0.5
3,272,034	+		PfGW456L13_2934	0.63	+0.8
3,272,034	+		PfGW456L13_2934	0.63	+1.6
3,272,035	-		PfGW456L13_2934	0.63	+0.9
3,272,035	-		PfGW456L13_2934	0.63	-0.2
3,272,035	-		PfGW456L13_2934	0.63	+0.6
3,272,035	-		PfGW456L13_2934	0.63	-1.9
3,272,035	-		PfGW456L13_2934	0.63	-2.3
3,272,035	-		PfGW456L13_2934	0.63	-0.5
3,272,145	+		PfGW456L13_2934	0.75	+0.8
3,272,146	-		PfGW456L13_2934	0.75	-1.5
3,272,146	-		PfGW456L13_2934	0.75	-3.5
3,272,176	-		PfGW456L13_2934	0.78	-1.1
3,272,176	-		PfGW456L13_2934	0.78	-1.1
3,272,188	-		PfGW456L13_2934	0.79	-2.0
3,272,188	-		PfGW456L13_2934	0.79	-1.0
3,272,188	-		PfGW456L13_2934	0.79	+1.4
3,272,323	+				-2.9
3,272,324	-				+0.2