Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2165

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
2,366,915	-		PfGW456L13_2163	0.66	+0.3
2,367,014	-		PfGW456L13_2163	0.77	-2.2
2,367,073	+		PfGW456L13_2163	0.83	+0.2
2,367,073	+		PfGW456L13_2163	0.83	+1.1
2,367,073	+		PfGW456L13_2163	0.83	-2.9
2,367,253	+				-1.6
2,367,253	+				-1.0
2,367,253	+				-0.5
2,367,253	+				+0.7
2,367,253	+				+0.1
2,367,253	+				+1.2
2,367,253	+				-1.5
2,367,253	+				-2.8
2,367,253	+				-0.5
2,367,253	+				-0.1
2,367,253	+				-0.1
2,367,253	+				+0.6
2,367,254	-				+1.3
2,367,254	-				+1.9
2,367,254	-				+1.1
2,367,254	-				-0.1
2,367,254	-				-2.1
2,367,254	-				+0.7
2,367,254	-				+0.1
2,367,254	-				+0.2
2,367,409	+		PfGW456L13_2164	0.27	+0.4
2,367,409	+				-0.1
2,367,589	+		PfGW456L13_2164	0.56	+0.0
2,367,590	+		PfGW456L13_2164	0.56	+0.9
2,367,590	-		PfGW456L13_2164	0.56	-1.2
2,367,590	-		PfGW456L13_2164	0.56	-0.3
2,367,775	-		PfGW456L13_2164	0.85	-1.7
2,367,979	-				-3.9
2,368,121	+		PfGW456L13_2165	0.14	-1.1
2,368,121	+		PfGW456L13_2165	0.14	-0.9
2,368,226	+		PfGW456L13_2165	0.20	+0.3
2,368,239	+		PfGW456L13_2165	0.21	+1.9
2,368,239	+		PfGW456L13_2165	0.21	-0.1
2,368,240	-		PfGW456L13_2165	0.21	+1.9
2,368,264	+		PfGW456L13_2165	0.22	+1.1
2,368,264	+		PfGW456L13_2165	0.22	-0.6
2,368,281	-		PfGW456L13_2165	0.23	+1.7
2,368,309	+		PfGW456L13_2165	0.25	+1.5
2,368,310	-		PfGW456L13_2165	0.25	-3.5
2,368,310	-		PfGW456L13_2165	0.25	+0.4
2,368,310	-		PfGW456L13_2165	0.25	-0.4
2,368,472	+		PfGW456L13_2165	0.33	-0.5
2,368,472	+		PfGW456L13_2165	0.33	+0.4
2,368,472	+		PfGW456L13_2165	0.33	-0.9
2,368,472	+		PfGW456L13_2165	0.33	-0.6
2,368,472	+		PfGW456L13_2165	0.33	-0.9
2,368,472	+		PfGW456L13_2165	0.33	+0.2
2,368,473	-		PfGW456L13_2165	0.34	+0.6
2,368,473	-		PfGW456L13_2165	0.34	-4.2
2,368,473	-		PfGW456L13_2165	0.34	+2.1
2,368,543	+		PfGW456L13_2165	0.37	+1.1
2,368,652	+		PfGW456L13_2165	0.43	-1.3
2,368,652	+		PfGW456L13_2165	0.43	-2.9
2,368,652	+		PfGW456L13_2165	0.43	+0.7
2,368,652	+		PfGW456L13_2165	0.43	+1.2
2,368,726	+		PfGW456L13_2165	0.47	-0.5
2,368,802	+		PfGW456L13_2165	0.52	-2.2
2,368,802	+		PfGW456L13_2165	0.52	-1.5
2,368,802	+		PfGW456L13_2165	0.52	+0.6
2,368,802	+		PfGW456L13_2165	0.52	+0.8
2,368,803	-		PfGW456L13_2165	0.52	+0.5
2,368,850	+		PfGW456L13_2165	0.54	+2.1
2,368,850	+		PfGW456L13_2165	0.54	+0.2
2,368,850	+		PfGW456L13_2165	0.54	-1.1
2,368,850	+		PfGW456L13_2165	0.54	+1.1
2,368,850	+		PfGW456L13_2165	0.54	+0.3
2,368,851	-		PfGW456L13_2165	0.54	+0.3
2,368,851	-		PfGW456L13_2165	0.54	-3.1
2,368,851	-		PfGW456L13_2165	0.54	+0.2
2,368,851	-		PfGW456L13_2165	0.54	-2.5
2,368,856	+		PfGW456L13_2165	0.55	-4.5
2,368,856	+		PfGW456L13_2165	0.55	-0.2
2,368,856	+		PfGW456L13_2165	0.55	-1.3
2,368,856	+		PfGW456L13_2165	0.55	-1.9
2,368,857	-		PfGW456L13_2165	0.55	+1.3
2,368,857	-		PfGW456L13_2165	0.55	-1.5
2,368,859	+		PfGW456L13_2165	0.55	-2.8
2,368,859	+		PfGW456L13_2165	0.55	-0.9
2,368,859	+		PfGW456L13_2165	0.55	-0.1
2,368,860	-		PfGW456L13_2165	0.55	-2.1
2,368,860	-		PfGW456L13_2165	0.55	-3.8
2,368,860	-		PfGW456L13_2165	0.55	+0.8
2,368,860	-		PfGW456L13_2165	0.55	-2.1
2,368,860	-		PfGW456L13_2165	0.55	-0.5
2,368,974	+		PfGW456L13_2165	0.61	-3.3
2,368,974	+		PfGW456L13_2165	0.61	+1.5
2,368,974	+		PfGW456L13_2165	0.61	+0.2
2,368,974	+		PfGW456L13_2165	0.61	-2.2
2,368,974	+		PfGW456L13_2165	0.61	-0.2
2,368,974	+		PfGW456L13_2165	0.61	+2.2
2,368,974	+		PfGW456L13_2165	0.61	+2.0
2,368,974	+		PfGW456L13_2165	0.61	+0.6
2,368,975	-		PfGW456L13_2165	0.61	+0.4
2,368,975	-		PfGW456L13_2165	0.61	+0.3
2,368,975	-		PfGW456L13_2165	0.61	-0.2
2,368,975	-		PfGW456L13_2165	0.61	+0.1
2,368,994	+		PfGW456L13_2165	0.62	-0.8
2,369,114	+		PfGW456L13_2165	0.69	+0.1
2,369,114	+		PfGW456L13_2165	0.69	+0.8
2,369,115	-		PfGW456L13_2165	0.69	-0.0
2,369,115	-		PfGW456L13_2165	0.69	+1.1
2,369,115	-		PfGW456L13_2165	0.69	-2.6
2,369,115	-		PfGW456L13_2165	0.69	-2.2
2,369,308	-		PfGW456L13_2165	0.79	-0.2
2,369,314	+		PfGW456L13_2165	0.80	-3.9
2,369,415	+		PfGW456L13_2165	0.85	+0.8
2,369,416	-		PfGW456L13_2165	0.85	-2.0
2,369,480	+		PfGW456L13_2165	0.89	-2.2
2,369,480	+		PfGW456L13_2165	0.89	-2.5
2,369,481	-		PfGW456L13_2165	0.89	-1.9
2,369,481	-		PfGW456L13_2165	0.89	-3.2
2,369,481	-		PfGW456L13_2165	0.89	-2.2
2,369,481	-		PfGW456L13_2165	0.89	+0.2
2,369,481	-		PfGW456L13_2165	0.89	+0.9
2,369,481	-		PfGW456L13_2165	0.89	+2.0
2,369,645	+				-2.3
2,369,645	+				+0.9
2,369,658	-				+2.0
2,369,678	+				-1.4
2,369,679	-				+0.6
2,369,690	-				-3.9
2,369,716	+				-0.5
2,369,716	+				-1.0
2,369,716	+				-3.5
2,369,717	-				+1.7
2,369,717	-				-2.1
2,369,717	-				+2.0
2,369,719	+				-1.6
2,369,719	+				+0.0
2,369,719	+				-0.9
2,369,722	-				-0.0
2,369,759	-				+1.5
2,369,773	+				-0.5
2,369,773	+				-3.7
2,369,773	+				-1.1
2,369,773	+				-0.5
2,369,773	+				+0.2
2,369,773	+				+0.6
2,369,774	-				+1.6
2,369,774	-				+2.8
2,369,808	-				+1.1
2,369,808	-				-2.2
2,369,808	-				-2.9
2,369,808	-				-2.1
2,369,812	+				-0.2
2,369,812	+				-0.9
2,369,812	+				-2.5
2,369,812	+				-0.9
2,369,812	+				-2.4
2,369,813	-				+1.4
2,369,813	-				+1.8
2,369,813	-				-0.8
2,369,813	-				+0.4
2,369,813	-				+1.7
2,369,813	-				-4.6
2,369,813	-				+0.9
2,369,813	-				+0.7
2,369,813	-				+0.0
2,369,813	-				-0.2
2,369,813	-				-1.4
2,369,813	-				-3.4
2,369,813	-				-2.5
2,369,813	-				+2.2
2,369,813	-				+1.9
2,369,813	-				-1.7
2,369,816	+				+1.6
2,369,816	+				-1.1
2,369,816	+				-1.1
2,369,816	+				-4.4
2,369,816	+				+0.2
2,369,816	+				-2.9
2,369,816	+				-0.1
2,369,817	-				+2.1
2,369,817	-				+0.1
2,369,817	-				+0.4
2,369,817	-				+0.5
2,369,817	-				-2.1
2,369,817	-				-3.4
2,369,817	-				+0.3
2,369,818	+				+1.6
2,369,853	-				-0.8
2,369,970	+				-0.5
2,369,971	-				-0.1
2,369,971	-				-2.1
2,369,974	+				+0.5
2,369,975	-				+1.1
2,369,975	-				-0.3
2,369,975	-				+0.5
2,369,975	-				-2.8
2,369,975	-				-1.9
2,369,975	-				+0.9
2,369,975	-				-0.1
2,369,994	+				+1.1
2,370,042	+				+2.8
2,370,042	+				-3.1
2,370,042	+				+2.1
2,370,042	+				+0.7
2,370,042	+				+1.7
2,370,042	+				+0.8
2,370,043	-				-0.2
2,370,043	-				-2.6
2,370,043	-				-0.0
2,370,043	-				-0.2
2,370,046	-				+1.2
2,370,093	+				+1.6
2,370,093	+				-0.9
2,370,093	+				-3.5
2,370,093	+				+0.8
2,370,094	-				-3.0
2,370,166	+		PfGW456L13_2166	0.12	-0.1
2,370,166	+		PfGW456L13_2166	0.12	-3.1
2,370,166	+		PfGW456L13_2166	0.12	+0.2
2,370,167	-		PfGW456L13_2166	0.12	-0.5
2,370,167	-		PfGW456L13_2166	0.12	+1.6
2,370,237	+		PfGW456L13_2166	0.15	+2.0
2,370,237	+		PfGW456L13_2166	0.15	+0.4
2,370,262	-		PfGW456L13_2166	0.16	-1.0
2,370,262	-		PfGW456L13_2166	0.16	+1.8
2,370,303	+		PfGW456L13_2166	0.18	+0.4
2,370,303	+		PfGW456L13_2166	0.18	-0.3
2,370,303	+		PfGW456L13_2166	0.18	-2.2
2,370,303	+		PfGW456L13_2166	0.18	+1.1
2,370,303	+		PfGW456L13_2166	0.18	+0.2
2,370,303	+		PfGW456L13_2166	0.18	+0.7
2,370,304	-		PfGW456L13_2166	0.18	+2.4
2,370,304	-		PfGW456L13_2166	0.18	+0.5
2,370,304	-		PfGW456L13_2166	0.18	-3.1
2,370,379	+		PfGW456L13_2166	0.21	-0.3
2,370,379	+		PfGW456L13_2166	0.21	+0.9
2,370,379	+		PfGW456L13_2166	0.21	+0.5
2,370,379	+		PfGW456L13_2166	0.21	-4.0
2,370,379	+		PfGW456L13_2166	0.21	-0.7
2,370,380	-		PfGW456L13_2166	0.21	+0.6
2,370,380	-		PfGW456L13_2166	0.21	-0.2
2,370,380	-		PfGW456L13_2166	0.21	+0.4
2,370,380	-		PfGW456L13_2166	0.21	-2.8
2,370,380	-		PfGW456L13_2166	0.21	-1.6
2,370,498	-		PfGW456L13_2166	0.26	-3.1
2,370,672	+		PfGW456L13_2166	0.33	-0.9
2,370,672	+		PfGW456L13_2166	0.33	+1.6
2,370,672	+		PfGW456L13_2166	0.33	-0.7
2,370,673	-		PfGW456L13_2166	0.33	-0.2