Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1884

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
2,073,609	-		PfGW456L13_1882	0.78	-1.1
2,073,645	+		PfGW456L13_1882	0.87	-0.8
2,073,645	+		PfGW456L13_1882	0.87	-0.8
2,073,646	-		PfGW456L13_1882	0.87	-3.7
2,073,646	-		PfGW456L13_1882	0.87	+1.0
2,073,794	+				+2.2
2,073,794	+				-0.6
2,073,795	-				+0.0
2,073,795	-				-0.5
2,073,851	+				-4.1
2,073,851	+				-1.8
2,073,851	+				+1.0
2,073,851	+				+1.1
2,073,852	-				+0.8
2,073,852	-				+0.6
2,073,852	-				+1.1
2,073,902	+				-4.9
2,074,279	+		PfGW456L13_1883	0.70	+0.4
2,074,279	+		PfGW456L13_1883	0.70	+0.4
2,074,280	-		PfGW456L13_1883	0.70	+0.1
2,074,280	-		PfGW456L13_1883	0.70	-2.4
2,074,704	+				-0.6
2,074,705	-				-3.9
2,074,705	-				-2.7
2,074,705	-				-2.9
2,074,725	+				+0.1
2,074,725	+				-4.5
2,074,725	+				+1.6
2,074,725	+				-0.4
2,074,725	+				+0.2
2,074,726	-				+0.2
2,074,765	-				-3.8
2,074,765	-				-2.5
2,074,765	-				-1.1
2,074,896	+		PfGW456L13_1884	0.13	-0.7
2,074,896	+		PfGW456L13_1884	0.13	+0.2
2,074,897	-		PfGW456L13_1884	0.13	+0.4
2,074,897	-		PfGW456L13_1884	0.13	-1.5
2,074,897	-		PfGW456L13_1884	0.13	-2.5
2,074,897	-		PfGW456L13_1884	0.13	-1.9
2,074,897	-		PfGW456L13_1884	0.13	+0.2
2,074,984	-		PfGW456L13_1884	0.16	-1.3
2,074,989	+		PfGW456L13_1884	0.16	-3.2
2,074,989	+		PfGW456L13_1884	0.16	-0.2
2,075,010	+		PfGW456L13_1884	0.17	+0.1
2,075,011	-		PfGW456L13_1884	0.17	+1.6
2,075,011	-		PfGW456L13_1884	0.17	-0.3
2,075,011	-		PfGW456L13_1884	0.17	+0.3
2,075,119	-		PfGW456L13_1884	0.21	-4.1
2,075,157	+		PfGW456L13_1884	0.23	-2.7
2,075,157	+		PfGW456L13_1884	0.23	-4.0
2,075,158	-		PfGW456L13_1884	0.23	-1.9
2,075,166	+		PfGW456L13_1884	0.23	+0.9
2,075,166	+		PfGW456L13_1884	0.23	+1.2
2,075,167	-		PfGW456L13_1884	0.23	-2.4
2,075,167	-		PfGW456L13_1884	0.23	-3.3
2,075,177	+		PfGW456L13_1884	0.24	-0.6
2,075,223	+		PfGW456L13_1884	0.26	-3.8
2,075,223	+		PfGW456L13_1884	0.26	-1.5
2,075,224	-		PfGW456L13_1884	0.26	+0.0
2,075,258	-		PfGW456L13_1884	0.27	-1.7
2,075,301	+		PfGW456L13_1884	0.29	+0.9
2,075,301	+		PfGW456L13_1884	0.29	-0.6
2,075,302	-		PfGW456L13_1884	0.29	-0.0
2,075,302	-		PfGW456L13_1884	0.29	-2.6
2,075,302	-		PfGW456L13_1884	0.29	-4.1
2,075,340	+		PfGW456L13_1884	0.30	-2.6
2,075,341	-		PfGW456L13_1884	0.30	-2.4
2,075,341	-		PfGW456L13_1884	0.30	-3.2
2,075,358	+		PfGW456L13_1884	0.31	-1.6
2,075,358	+		PfGW456L13_1884	0.31	-1.6
2,075,359	-		PfGW456L13_1884	0.31	-3.3
2,075,359	-		PfGW456L13_1884	0.31	-1.2
2,075,359	-		PfGW456L13_1884	0.31	-3.3
2,075,359	-		PfGW456L13_1884	0.31	-3.7
2,075,376	+		PfGW456L13_1884	0.32	-0.9
2,075,377	-		PfGW456L13_1884	0.32	-2.9
2,075,435	-		PfGW456L13_1884	0.34	-2.5
2,075,500	-		PfGW456L13_1884	0.37	-2.2
2,075,505	+		PfGW456L13_1884	0.37	+0.1
2,075,568	+		PfGW456L13_1884	0.39	+0.3
2,075,568	+		PfGW456L13_1884	0.39	+0.8
2,075,568	+		PfGW456L13_1884	0.39	+1.1
2,075,568	+		PfGW456L13_1884	0.39	-2.0
2,075,568	+		PfGW456L13_1884	0.39	+0.7
2,075,569	-		PfGW456L13_1884	0.39	-2.7
2,075,569	-		PfGW456L13_1884	0.39	-1.3
2,075,569	-		PfGW456L13_1884	0.39	+0.6
2,075,627	-		PfGW456L13_1884	0.42	-1.8
2,075,683	+		PfGW456L13_1884	0.44	-1.7
2,075,724	+		PfGW456L13_1884	0.45	+1.7
2,075,724	+		PfGW456L13_1884	0.45	-3.3
2,075,724	+		PfGW456L13_1884	0.45	-0.5
2,075,724	+		PfGW456L13_1884	0.45	-3.2
2,075,725	-		PfGW456L13_1884	0.45	-2.7
2,075,725	-		PfGW456L13_1884	0.45	-1.7
2,075,725	-		PfGW456L13_1884	0.45	-0.2
2,075,725	-		PfGW456L13_1884	0.45	+1.4
2,075,725	-		PfGW456L13_1884	0.45	+0.9
2,075,725	-		PfGW456L13_1884	0.45	-1.3
2,075,725	-		PfGW456L13_1884	0.45	-0.4
2,075,725	-		PfGW456L13_1884	0.45	+0.2
2,075,725	-		PfGW456L13_1884	0.45	-2.2
2,075,725	-		PfGW456L13_1884	0.45	+0.1
2,075,802	+		PfGW456L13_1884	0.48	-2.7
2,075,802	+		PfGW456L13_1884	0.48	+1.7
2,075,803	-		PfGW456L13_1884	0.49	-0.6
2,075,803	-		PfGW456L13_1884	0.49	-0.9
2,075,803	-		PfGW456L13_1884	0.49	-2.5
2,075,803	-		PfGW456L13_1884	0.49	-2.8
2,075,847	+		PfGW456L13_1884	0.50	-1.3
2,075,994	+		PfGW456L13_1884	0.56	-1.0
2,075,994	+		PfGW456L13_1884	0.56	-0.7
2,075,994	+		PfGW456L13_1884	0.56	-2.8
2,075,994	+		PfGW456L13_1884	0.56	-2.5
2,075,994	+		PfGW456L13_1884	0.56	-0.8
2,075,995	-		PfGW456L13_1884	0.56	+0.8
2,075,995	-		PfGW456L13_1884	0.56	+1.1
2,075,995	-		PfGW456L13_1884	0.56	+0.6
2,075,995	-		PfGW456L13_1884	0.56	-2.3
2,076,069	+		PfGW456L13_1884	0.59	-0.5
2,076,069	+		PfGW456L13_1884	0.59	+0.1
2,076,069	+		PfGW456L13_1884	0.59	-1.3
2,076,069	+		PfGW456L13_1884	0.59	+0.9
2,076,069	+		PfGW456L13_1884	0.59	+0.7
2,076,069	+		PfGW456L13_1884	0.59	-1.0
2,076,069	+		PfGW456L13_1884	0.59	+0.7
2,076,069	+		PfGW456L13_1884	0.59	+0.8
2,076,069	+		PfGW456L13_1884	0.59	+0.6
2,076,070	-		PfGW456L13_1884	0.59	+0.5
2,076,070	-		PfGW456L13_1884	0.59	-0.9
2,076,070	-		PfGW456L13_1884	0.59	-3.5
2,076,070	-		PfGW456L13_1884	0.59	+1.9
2,076,078	+		PfGW456L13_1884	0.59	-0.5
2,076,078	+		PfGW456L13_1884	0.59	-0.1
2,076,078	+		PfGW456L13_1884	0.59	-4.1
2,076,078	+		PfGW456L13_1884	0.59	-1.8
2,076,078	+		PfGW456L13_1884	0.59	-1.0
2,076,078	+		PfGW456L13_1884	0.59	-0.2
2,076,078	+		PfGW456L13_1884	0.59	-0.9
2,076,078	+		PfGW456L13_1884	0.59	-1.9
2,076,078	+		PfGW456L13_1884	0.59	-1.3
2,076,078	+		PfGW456L13_1884	0.59	-0.2
2,076,078	+		PfGW456L13_1884	0.59	-5.0
2,076,078	+		PfGW456L13_1884	0.59	-2.6
2,076,078	+		PfGW456L13_1884	0.59	-2.9
2,076,079	-		PfGW456L13_1884	0.59	-1.8
2,076,079	-		PfGW456L13_1884	0.59	-1.5
2,076,079	-		PfGW456L13_1884	0.59	-1.7
2,076,079	-		PfGW456L13_1884	0.59	-1.3
2,076,079	-		PfGW456L13_1884	0.59	-0.6
2,076,108	+		PfGW456L13_1884	0.61	-0.5
2,076,201	+		PfGW456L13_1884	0.64	+0.3
2,076,201	+		PfGW456L13_1884	0.64	-0.6
2,076,201	+		PfGW456L13_1884	0.64	+0.6
2,076,262	+		PfGW456L13_1884	0.67	-2.0
2,076,263	-		PfGW456L13_1884	0.67	-2.4
2,076,378	+		PfGW456L13_1884	0.71	+0.2
2,076,378	+		PfGW456L13_1884	0.71	-0.5
2,076,378	+		PfGW456L13_1884	0.71	-2.4
2,076,378	+		PfGW456L13_1884	0.71	-1.5
2,076,379	-		PfGW456L13_1884	0.71	-1.6
2,076,379	-		PfGW456L13_1884	0.71	-1.0
2,076,379	-		PfGW456L13_1884	0.71	-1.5
2,076,381	+		PfGW456L13_1884	0.71	+0.2
2,076,381	+		PfGW456L13_1884	0.71	-0.8
2,076,381	+		PfGW456L13_1884	0.71	-0.4
2,076,381	+		PfGW456L13_1884	0.71	+0.5
2,076,382	-		PfGW456L13_1884	0.71	-1.5
2,076,382	-		PfGW456L13_1884	0.71	-2.4
2,076,474	+		PfGW456L13_1884	0.75	+1.7
2,076,474	+		PfGW456L13_1884	0.75	-2.2
2,076,474	+		PfGW456L13_1884	0.75	-1.7
2,076,474	+		PfGW456L13_1884	0.75	-0.9
2,076,474	+		PfGW456L13_1884	0.75	-0.5
2,076,474	+		PfGW456L13_1884	0.75	-0.9
2,076,474	+		PfGW456L13_1884	0.75	-1.4
2,076,474	+		PfGW456L13_1884	0.75	-0.1
2,076,474	+		PfGW456L13_1884	0.75	+0.4
2,076,474	+		PfGW456L13_1884	0.75	-1.5
2,076,474	+		PfGW456L13_1884	0.75	-4.1
2,076,474	+		PfGW456L13_1884	0.75	-0.5
2,076,474	+		PfGW456L13_1884	0.75	-3.5
2,076,474	+		PfGW456L13_1884	0.75	-0.5
2,076,474	+		PfGW456L13_1884	0.75	-0.4
2,076,474	+		PfGW456L13_1884	0.75	-3.6
2,076,475	-		PfGW456L13_1884	0.75	-0.6
2,076,475	-		PfGW456L13_1884	0.75	+0.1
2,076,475	-		PfGW456L13_1884	0.75	-0.1
2,076,475	-		PfGW456L13_1884	0.75	-0.4
2,076,475	-		PfGW456L13_1884	0.75	+0.7
2,076,475	-		PfGW456L13_1884	0.75	+0.1
2,076,475	-		PfGW456L13_1884	0.75	-0.7
2,076,475	-		PfGW456L13_1884	0.75	-1.0
2,076,495	+		PfGW456L13_1884	0.76	+2.4
2,076,495	+		PfGW456L13_1884	0.76	-0.9
2,076,495	+		PfGW456L13_1884	0.76	+1.2
2,076,496	-		PfGW456L13_1884	0.76	-0.5
2,076,496	-		PfGW456L13_1884	0.76	-0.5
2,076,496	-		PfGW456L13_1884	0.76	+0.8
2,076,579	+		PfGW456L13_1884	0.79	+0.9
2,076,580	-		PfGW456L13_1884	0.79	-1.8
2,076,656	-		PfGW456L13_1884	0.82	-1.6
2,076,656	-		PfGW456L13_1884	0.82	-3.3
2,076,716	-		PfGW456L13_1884	0.85	-3.5
2,076,778	+		PfGW456L13_1884	0.87	+0.1
2,076,779	-		PfGW456L13_1884	0.87	-3.1
2,076,955	+				-1.0
2,076,955	+				-4.2
2,076,955	+				-0.4
2,076,955	+				-1.3
2,077,005	+				+0.7
2,077,006	-				-0.8
2,077,114	+				-0.3
2,077,114	+				+0.8
2,077,115	-				-3.6
2,077,115	-				+0.1
2,077,174	-				-0.8
2,077,174	-				-0.2
2,077,175	+				-3.1
2,077,175	+				+1.3
2,077,175	+				+1.4
2,077,175	+				-2.9
2,077,175	+				+0.1
2,077,175	+				-0.9
2,077,175	+				-1.8
2,077,175	+				-1.9
2,077,176	-				+0.1
2,077,176	-				-0.3
2,077,176	-				-0.2
2,077,176	-				-2.1
2,077,176	-				+0.9
2,077,176	-				+0.1
2,077,176	-				+1.9
2,077,176	-				+0.4
2,077,176	-				-0.1
2,077,176	-				+1.0
2,077,176	-				-1.7
2,077,176	-				-2.1
2,077,361	+		PfGW456L13_1885	0.10	+0.7
2,077,362	-		PfGW456L13_1885	0.10	-2.4
2,077,444	+		PfGW456L13_1885	0.19	-2.8
2,077,444	+		PfGW456L13_1885	0.19	-0.0
2,077,444	+		PfGW456L13_1885	0.19	-1.2
2,077,445	-		PfGW456L13_1885	0.20	-0.5
2,077,445	-		PfGW456L13_1885	0.20	-2.7
2,077,445	-		PfGW456L13_1885	0.20	-0.1
2,077,624	+		PfGW456L13_1885	0.39	-0.5
2,077,624	+		PfGW456L13_1885	0.39	-0.7
2,077,652	+		PfGW456L13_1885	0.42	+0.6
2,077,653	-		PfGW456L13_1885	0.42	+0.5
2,077,653	-		PfGW456L13_1885	0.42	+0.6
2,077,760	+		PfGW456L13_1885	0.54	-2.1
2,077,815	+		PfGW456L13_1885	0.60	+0.5
2,077,816	-		PfGW456L13_1885	0.60	+1.7