Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1487

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
1,636,637	-		PfGW456L13_1484	0.86	+0.7
1,636,637	-		PfGW456L13_1484	0.86	-3.0
1,636,767	+				-0.5
1,636,767	+				+1.3
1,636,767	+				-2.4
1,636,767	+				+0.7
1,636,768	-				-2.9
1,636,768	-				-0.1
1,636,877	+		PfGW456L13_1485	0.26	+0.3
1,636,877	+		PfGW456L13_1485	0.26	+1.1
1,636,940	+		PfGW456L13_1485	0.39	+1.6
1,636,941	-		PfGW456L13_1485	0.39	-0.5
1,636,959	+		PfGW456L13_1485	0.43	+0.2
1,636,959	+		PfGW456L13_1485	0.43	-0.7
1,636,959	+		PfGW456L13_1485	0.43	-1.0
1,636,960	-		PfGW456L13_1485	0.43	+1.5
1,636,960	-		PfGW456L13_1485	0.43	-1.1
1,636,960	-		PfGW456L13_1485	0.43	-1.5
1,636,960	-		PfGW456L13_1485	0.43	-4.2
1,636,966	+		PfGW456L13_1485	0.45	-2.6
1,636,967	-		PfGW456L13_1485	0.45	-2.1
1,637,018	+		PfGW456L13_1485	0.56	+1.3
1,637,018	+		PfGW456L13_1485	0.56	-3.4
1,637,019	-		PfGW456L13_1485	0.56	-0.7
1,637,082	+		PfGW456L13_1485	0.70	+1.8
1,637,082	+		PfGW456L13_1485	0.70	-0.7
1,637,082	+		PfGW456L13_1485	0.70	-0.4
1,637,152	-		PfGW456L13_1485	0.85	-1.5
1,637,152	-		PfGW456L13_1485	0.85	+0.2
1,637,167	+		PfGW456L13_1485	0.88	-0.1
1,637,167	+		PfGW456L13_1485	0.88	-3.0
1,637,168	-		PfGW456L13_1485	0.88	+0.2
1,637,208	+				-0.6
1,637,208	+				-0.2
1,637,208	+				-0.7
1,637,208	+				-2.4
1,637,208	+				-1.1
1,637,208	+				-1.5
1,637,209	-				-2.1
1,637,209	-				-1.0
1,637,209	-				+0.0
1,637,209	-				+0.3
1,637,209	-				+0.2
1,637,209	-				-3.0
1,637,217	+				-0.7
1,637,217	+				+0.1
1,637,217	+				-0.4
1,637,230	-				+1.2
1,637,357	-		PfGW456L13_1486	0.27	-1.9
1,637,365	+		PfGW456L13_1486	0.30	+0.6
1,637,365	+		PfGW456L13_1486	0.30	-0.1
1,637,365	+		PfGW456L13_1486	0.30	+0.2
1,637,366	-		PfGW456L13_1486	0.30	-0.4
1,637,366	-		PfGW456L13_1486	0.30	+0.3
1,637,366	-		PfGW456L13_1486	0.30	+1.0
1,637,424	+		PfGW456L13_1486	0.46	+0.8
1,637,424	+		PfGW456L13_1486	0.46	-2.0
1,637,425	-		PfGW456L13_1486	0.46	-0.2
1,637,425	-		PfGW456L13_1486	0.46	+3.2
1,637,425	-		PfGW456L13_1486	0.46	-3.0
1,637,486	+		PfGW456L13_1486	0.63	-1.7
1,637,615	+				+1.3
1,637,615	+				-2.1
1,637,615	+				-0.1
1,637,615	+				+0.5
1,637,615	+				+2.2
1,637,615	+				-0.9
1,637,615	+				+1.9
1,637,616	-				+0.7
1,637,616	-				+3.0
1,637,616	-				-0.2
1,637,616	-				-1.5
1,637,616	-				+0.8
1,637,616	-				+0.5
1,637,620	+				-0.5
1,637,620	+				-2.8
1,637,620	+				-3.8
1,637,620	+				+0.2
1,637,620	+				+0.2
1,637,620	+				+0.9
1,637,620	+				+0.7
1,637,621	-				-0.4
1,637,621	-				-2.6
1,637,621	-				+1.5
1,637,621	-				+2.2
1,637,621	-				-0.1
1,637,621	-				+3.0
1,637,621	-				+0.3
1,637,621	-				+3.3
1,637,621	-				-3.1
1,637,621	-				-1.1
1,637,642	+				+0.8
1,637,642	+				+1.4
1,637,642	+				+0.1
1,637,642	+				-0.9
1,637,643	-				-2.5
1,637,645	+				-1.8
1,637,645	+				-0.2
1,637,646	-				+1.2
1,637,646	-				+1.1
1,637,646	-				+2.0
1,637,646	-				+0.3
1,637,661	-				+1.2
1,637,736	+		PfGW456L13_1487	0.25	-1.0
1,637,809	-		PfGW456L13_1487	0.43	-2.3
1,637,809	-		PfGW456L13_1487	0.43	+0.6
1,637,809	-		PfGW456L13_1487	0.43	+0.3
1,637,826	+		PfGW456L13_1487	0.47	-0.8
1,637,826	+		PfGW456L13_1487	0.47	-1.3
1,637,827	-		PfGW456L13_1487	0.47	-0.3
1,637,862	+		PfGW456L13_1487	0.56	-1.0
1,637,862	+		PfGW456L13_1487	0.56	+1.4
1,637,862	+		PfGW456L13_1487	0.56	+0.9
1,637,862	+		PfGW456L13_1487	0.56	+2.1
1,637,862	+		PfGW456L13_1487	0.56	+0.8
1,637,862	+		PfGW456L13_1487	0.56	-1.5
1,637,862	+		PfGW456L13_1487	0.56	+0.6
1,637,862	+		PfGW456L13_1487	0.56	-3.1
1,637,863	-		PfGW456L13_1487	0.56	+1.1
1,637,863	-		PfGW456L13_1487	0.56	-1.7
1,637,863	-		PfGW456L13_1487	0.56	-3.3
1,637,865	+		PfGW456L13_1487	0.57	+0.7
1,637,865	+		PfGW456L13_1487	0.57	+1.6
1,637,865	+		PfGW456L13_1487	0.57	+1.8
1,637,865	+		PfGW456L13_1487	0.57	+0.7
1,637,865	+		PfGW456L13_1487	0.57	-3.4
1,637,865	+		PfGW456L13_1487	0.57	-3.1
1,637,865	+		PfGW456L13_1487	0.57	-1.4
1,637,866	-		PfGW456L13_1487	0.57	+2.5
1,637,866	-		PfGW456L13_1487	0.57	-1.8
1,637,866	-		PfGW456L13_1487	0.57	-1.5
1,637,866	-		PfGW456L13_1487	0.57	+2.8
1,637,918	+		PfGW456L13_1487	0.70	+1.4
1,637,919	-		PfGW456L13_1487	0.70	-0.6
1,637,919	-		PfGW456L13_1487	0.70	-2.3
1,637,919	-		PfGW456L13_1487	0.70	+1.1
1,637,980	+		PfGW456L13_1487	0.85	-4.8
1,637,980	+		PfGW456L13_1487	0.85	-4.2
1,637,980	+		PfGW456L13_1487	0.85	+0.9
1,637,980	+		PfGW456L13_1487	0.85	+0.0
1,637,980	+		PfGW456L13_1487	0.85	-3.4
1,637,981	-		PfGW456L13_1487	0.86	+0.8
1,637,981	-		PfGW456L13_1487	0.86	-0.1
1,637,981	-		PfGW456L13_1487	0.86	+1.6
1,638,044	+				+1.1
1,638,044	+				-0.6
1,638,062	+				-0.5
1,638,062	+				+0.4
1,638,073	+				+0.4
1,638,073	+				-1.4
1,638,074	-				-3.4
1,638,074	-				+0.8
1,638,074	-				+0.7
1,638,266	+		PfGW456L13_1488	0.16	+1.3
1,638,311	+		PfGW456L13_1488	0.20	-0.4
1,638,312	-		PfGW456L13_1488	0.20	+1.1
1,638,380	+		PfGW456L13_1488	0.26	-3.6
1,638,457	+		PfGW456L13_1488	0.33	-0.5
1,638,515	+		PfGW456L13_1488	0.38	+0.6
1,638,515	+		PfGW456L13_1488	0.38	+0.0
1,638,515	+		PfGW456L13_1488	0.38	-2.6
1,638,515	+		PfGW456L13_1488	0.38	+0.1
1,638,515	+		PfGW456L13_1488	0.38	-3.1
1,638,515	+		PfGW456L13_1488	0.38	-3.9
1,638,515	+		PfGW456L13_1488	0.38	-0.1
1,638,515	+		PfGW456L13_1488	0.38	+0.3
1,638,515	+		PfGW456L13_1488	0.38	+0.5
1,638,515	+		PfGW456L13_1488	0.38	-0.0
1,638,515	+		PfGW456L13_1488	0.38	+0.3
1,638,516	-		PfGW456L13_1488	0.38	-0.2
1,638,516	-		PfGW456L13_1488	0.38	+0.6
1,638,516	-		PfGW456L13_1488	0.38	-3.3
1,638,541	+		PfGW456L13_1488	0.41	-0.3
1,638,542	-		PfGW456L13_1488	0.41	+0.7
1,638,542	-		PfGW456L13_1488	0.41	-1.8
1,638,785	+		PfGW456L13_1488	0.63	-1.5
1,638,785	+		PfGW456L13_1488	0.63	+1.5
1,638,786	-		PfGW456L13_1488	0.63	+1.0
1,638,786	-		PfGW456L13_1488	0.63	+1.9
1,638,786	-		PfGW456L13_1488	0.63	-0.9
1,638,786	-		PfGW456L13_1488	0.63	-0.4
1,638,864	+		PfGW456L13_1488	0.70	+1.2
1,638,864	+		PfGW456L13_1488	0.70	-0.5
1,638,864	+		PfGW456L13_1488	0.70	+0.5
1,638,864	+		PfGW456L13_1488	0.70	+1.7
1,638,864	+		PfGW456L13_1488	0.70	+2.9
1,638,864	+		PfGW456L13_1488	0.70	-4.4
1,638,864	+		PfGW456L13_1488	0.70	-4.1
1,638,864	+		PfGW456L13_1488	0.70	-0.7
1,638,864	+		PfGW456L13_1488	0.70	-1.4
1,638,865	-		PfGW456L13_1488	0.70	-2.0
1,638,865	-		PfGW456L13_1488	0.70	-3.4
1,638,865	-		PfGW456L13_1488	0.70	+0.6
1,638,865	-		PfGW456L13_1488	0.70	+2.3
1,638,865	-		PfGW456L13_1488	0.70	+1.0
1,638,865	-		PfGW456L13_1488	0.70	-1.6
1,638,865	-		PfGW456L13_1488	0.70	+0.6
1,638,865	-		PfGW456L13_1488	0.70	-0.4
1,638,865	-		PfGW456L13_1488	0.70	+1.2
1,638,865	-		PfGW456L13_1488	0.70	-0.3
1,638,865	-		PfGW456L13_1488	0.70	+0.0
1,638,877	+		PfGW456L13_1488	0.71	-1.7
1,638,878	-		PfGW456L13_1488	0.71	+2.0
1,638,878	-		PfGW456L13_1488	0.71	-3.8
1,639,031	+		PfGW456L13_1488	0.85	-3.6
1,639,031	+		PfGW456L13_1488	0.85	+1.5
1,639,031	+		PfGW456L13_1488	0.85	+0.7
1,639,032	-		PfGW456L13_1488	0.85	+0.7
1,639,032	-		PfGW456L13_1488	0.85	+0.7
1,639,032	-		PfGW456L13_1488	0.85	+0.1
1,639,032	-		PfGW456L13_1488	0.85	-0.4