Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1335

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
1,478,044	+		PfGW456L13_1334	0.23	-1.4
1,478,044	+		PfGW456L13_1334	0.23	-2.8
1,478,044	+		PfGW456L13_1334	0.23	+1.5
1,478,044	+		PfGW456L13_1334	0.23	+0.4
1,478,044	+		PfGW456L13_1334	0.23	+2.0
1,478,045	-		PfGW456L13_1334	0.23	+0.7
1,478,045	-		PfGW456L13_1334	0.23	+1.5
1,478,045	-		PfGW456L13_1334	0.23	+0.7
1,478,045	-		PfGW456L13_1334	0.23	-2.1
1,478,045	-		PfGW456L13_1334	0.23	-0.4
1,478,080	+		PfGW456L13_1334	0.28	+0.7
1,478,080	+		PfGW456L13_1334	0.28	+0.5
1,478,080	+		PfGW456L13_1334	0.28	+2.1
1,478,080	+		PfGW456L13_1334	0.28	-0.3
1,478,080	+		PfGW456L13_1334	0.28	+0.0
1,478,080	+		PfGW456L13_1334	0.28	+0.2
1,478,081	-		PfGW456L13_1334	0.28	-1.3
1,478,081	-		PfGW456L13_1334	0.28	-0.2
1,478,081	-		PfGW456L13_1334	0.28	+0.3
1,478,159	+		PfGW456L13_1334	0.38	+1.4
1,478,159	+		PfGW456L13_1334	0.38	+1.5
1,478,160	-		PfGW456L13_1334	0.39	-0.7
1,478,160	-		PfGW456L13_1334	0.39	-2.3
1,478,160	-		PfGW456L13_1334	0.39	+0.7
1,478,256	+		PfGW456L13_1334	0.51	-1.2
1,478,256	+		PfGW456L13_1334	0.51	+0.5
1,478,256	+		PfGW456L13_1334	0.51	-2.8
1,478,256	+		PfGW456L13_1334	0.51	-0.8
1,478,256	+		PfGW456L13_1334	0.51	-0.7
1,478,256	+		PfGW456L13_1334	0.51	+1.1
1,478,257	-		PfGW456L13_1334	0.52	+1.9
1,478,257	-		PfGW456L13_1334	0.52	-0.2
1,478,257	-		PfGW456L13_1334	0.52	-0.5
1,478,257	-		PfGW456L13_1334	0.52	-0.6
1,478,257	-		PfGW456L13_1334	0.52	+0.1
1,478,331	+		PfGW456L13_1334	0.61	-0.3
1,478,331	+		PfGW456L13_1334	0.61	+0.9
1,478,331	+		PfGW456L13_1334	0.61	+1.1
1,478,331	+		PfGW456L13_1334	0.61	-0.2
1,478,332	-		PfGW456L13_1334	0.62	+1.6
1,478,332	-		PfGW456L13_1334	0.62	+1.0
1,478,332	-		PfGW456L13_1334	0.62	-2.4
1,478,341	+		PfGW456L13_1334	0.63	+1.7
1,478,341	+		PfGW456L13_1334	0.63	+0.6
1,478,342	-		PfGW456L13_1334	0.63	-2.9
1,478,503	+		PfGW456L13_1334	0.84	-0.6
1,478,504	-		PfGW456L13_1334	0.85	-0.2
1,478,504	-		PfGW456L13_1334	0.85	-0.1
1,478,510	+		PfGW456L13_1334	0.85	+0.8
1,478,510	+		PfGW456L13_1334	0.85	+1.6
1,478,510	+		PfGW456L13_1334	0.85	-0.9
1,478,510	+		PfGW456L13_1334	0.85	+0.2
1,478,510	+		PfGW456L13_1334	0.85	-0.6
1,478,510	+		PfGW456L13_1334	0.85	+0.8
1,478,510	+		PfGW456L13_1334	0.85	-1.4
1,478,510	+		PfGW456L13_1334	0.85	+0.0
1,478,510	+		PfGW456L13_1334	0.85	-0.6
1,478,510	+		PfGW456L13_1334	0.85	-0.5
1,478,511	-		PfGW456L13_1334	0.86	+1.4
1,478,511	-		PfGW456L13_1334	0.86	+1.0
1,478,511	-		PfGW456L13_1334	0.86	-3.0
1,478,511	-		PfGW456L13_1334	0.86	-3.3
1,478,511	-		PfGW456L13_1334	0.86	+0.8
1,478,511	-		PfGW456L13_1334	0.86	-3.2
1,478,514	+		PfGW456L13_1334	0.86	-2.7
1,478,514	+		PfGW456L13_1334	0.86	-3.4
1,478,514	+		PfGW456L13_1334	0.86	+0.9
1,478,514	+		PfGW456L13_1334	0.86	-0.4
1,478,514	+		PfGW456L13_1334	0.86	-0.7
1,478,514	+		PfGW456L13_1334	0.86	+0.2
1,478,514	+		PfGW456L13_1334	0.86	-1.0
1,478,515	-		PfGW456L13_1334	0.86	-0.4
1,478,630	+				+1.6
1,478,630	+				+1.2
1,478,630	+				+0.4
1,478,655	+				-1.4
1,478,656	-				-1.7
1,478,656	-				+0.2
1,478,686	+				-2.7
1,478,687	-				+2.8
1,478,698	+				+1.0
1,478,698	+				-0.5
1,478,698	+				-3.1
1,478,698	+				+1.2
1,478,699	-				+3.0
1,478,699	-				+1.0
1,478,699	-				+2.0
1,478,699	-				+1.1
1,478,719	+				+1.1
1,478,720	-				-0.6
1,478,734	+				-2.8
1,478,750	+				+0.1
1,478,750	+				+0.5
1,478,751	-				-1.2
1,478,830	-				+0.1
1,479,393	-				-0.2
1,479,443	-				+0.8
1,479,443	-				+1.1
1,479,449	-				+1.0
1,479,449	-				+2.0
1,479,449	-				+1.8
1,479,449	-				+0.7
1,479,449	-				+0.1
1,479,449	-				+2.5
1,479,449	-				-2.6
1,479,449	-				+0.3
1,479,449	-				-0.0
1,479,449	-				+2.4
1,479,449	-				+0.9
1,479,449	-				-0.5
1,479,449	-				-3.5
1,479,449	-				-1.0
1,479,449	-				-3.1
1,479,481	+				+1.4
1,479,482	-				+0.0
1,479,482	-				+0.5
1,479,505	+				+0.8
1,479,505	+				-0.1
1,479,580	+		PfGW456L13_1336	0.11	+1.3
1,479,580	+		PfGW456L13_1336	0.11	+0.7
1,479,580	+		PfGW456L13_1336	0.11	+0.6
1,479,581	-		PfGW456L13_1336	0.11	+1.5
1,479,581	-		PfGW456L13_1336	0.11	+1.0
1,479,581	-		PfGW456L13_1336	0.11	-2.5
1,479,581	-		PfGW456L13_1336	0.11	-2.9
1,479,592	+		PfGW456L13_1336	0.13	+0.4
1,479,593	-		PfGW456L13_1336	0.13	+0.1
1,479,628	+		PfGW456L13_1336	0.17	-2.5
1,479,628	+		PfGW456L13_1336	0.17	-1.5
1,479,628	+		PfGW456L13_1336	0.17	+1.3
1,479,628	+		PfGW456L13_1336	0.17	+0.8
1,479,628	+		PfGW456L13_1336	0.17	+1.1
1,479,629	-		PfGW456L13_1336	0.17	+0.2
1,479,629	-		PfGW456L13_1336	0.17	-0.8
1,479,673	+		PfGW456L13_1336	0.23	-1.6
1,479,674	-		PfGW456L13_1336	0.23	+0.7
1,479,733	+		PfGW456L13_1336	0.30	-3.1
1,479,733	+		PfGW456L13_1336	0.30	-2.4
1,479,733	+		PfGW456L13_1336	0.30	+0.6
1,479,733	+		PfGW456L13_1336	0.30	-0.5
1,479,734	-		PfGW456L13_1336	0.30	+0.0
1,479,734	-		PfGW456L13_1336	0.30	-1.7
1,479,856	+		PfGW456L13_1336	0.45	-0.7
1,479,856	+		PfGW456L13_1336	0.45	-0.4
1,479,857	-		PfGW456L13_1336	0.45	-0.4
1,479,857	-		PfGW456L13_1336	0.45	+0.9
1,479,857	-		PfGW456L13_1336	0.45	-0.2
1,479,857	-		PfGW456L13_1336	0.45	-0.8
1,480,034	-		PfGW456L13_1336	0.67	+0.5
1,480,155	+		PfGW456L13_1336	0.82	-3.9
1,480,155	+		PfGW456L13_1336	0.82	+0.0
1,480,155	+		PfGW456L13_1336	0.82	-0.1
1,480,156	-		PfGW456L13_1336	0.82	-0.0
1,480,156	-		PfGW456L13_1336	0.82	-1.9
1,480,347	+				+1.4