Strain Fitness in Pseudomonas sp. RS175 around PFR28_03298

Experiment: Xanthosine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xanthosine (C) 10 mM
3,807,631	+		PFR28_03297	0.27	-0.1
3,807,631	+		PFR28_03297	0.27	+0.8
3,807,631	+		PFR28_03297	0.27	+1.3
3,807,631	+		PFR28_03297	0.27	+2.5
3,807,631	+		PFR28_03297	0.27	+0.3
3,807,631	+		PFR28_03297	0.27	+0.3
3,807,632	-		PFR28_03297	0.27	-0.4
3,807,632	-		PFR28_03297	0.27	+0.8
3,807,632	-		PFR28_03297	0.27	+0.6
3,807,632	-		PFR28_03297	0.27	-0.0
3,807,632	-		PFR28_03297	0.27	+0.1
3,807,632	-		PFR28_03297	0.27	-1.3
3,807,632	-		PFR28_03297	0.27	+1.5
3,807,632	-		PFR28_03297	0.27	+0.3
3,807,703	+		PFR28_03297	0.34	-0.5
3,807,773	+		PFR28_03297	0.41	+0.4
3,807,773	+		PFR28_03297	0.41	-0.6
3,807,773	+		PFR28_03297	0.41	-0.2
3,807,773	+		PFR28_03297	0.41	+1.3
3,807,773	+		PFR28_03297	0.41	-0.8
3,807,774	-		PFR28_03297	0.41	+1.3
3,807,774	-		PFR28_03297	0.41	-0.8
3,807,988	+		PFR28_03297	0.61	-0.9
3,807,988	+		PFR28_03297	0.61	+0.1
3,807,988	+		PFR28_03297	0.61	+0.1
3,807,988	+		PFR28_03297	0.61	-0.2
3,807,988	+		PFR28_03297	0.61	+1.0
3,807,988	+		PFR28_03297	0.61	+0.4
3,807,989	-		PFR28_03297	0.61	+1.2
3,807,989	-		PFR28_03297	0.61	-0.2
3,807,989	-		PFR28_03297	0.61	+0.2
3,807,989	-		PFR28_03297	0.61	+0.1
3,808,146	+		PFR28_03297	0.76	+0.4
3,808,146	+		PFR28_03297	0.76	+0.3
3,808,147	-		PFR28_03297	0.76	-0.0
3,808,235	+		PFR28_03297	0.84	-0.4
3,808,330	+				-0.9
3,808,331	-				-1.8
3,808,364	+				-0.9
3,808,364	+				-0.2
3,808,364	+				-2.8
3,808,364	+				-0.8
3,808,364	+				-0.1
3,808,364	+				+0.8
3,808,364	+				+0.6
3,808,364	+				+1.3
3,808,364	+				+0.2
3,808,364	+				-0.5
3,808,364	+				+0.5
3,808,364	+				+2.5
3,808,364	+				+0.5
3,808,364	+				+0.3
3,808,364	+				+1.3
3,808,365	-				+1.4
3,808,365	-				-3.0
3,808,365	-				-1.6
3,808,365	-				-1.5
3,808,365	-				+0.1
3,808,365	-				-0.2
3,808,365	-				+0.7
3,808,365	-				-0.3
3,808,365	-				-1.4
3,808,365	-				-1.1
3,808,365	-				+0.3
3,808,365	-				-0.2
3,808,408	+				+0.9
3,808,456	-				+0.8
3,808,456	-				-1.5
3,808,516	+				+0.6
3,808,549	+				-1.6
3,808,549	+				+1.3
3,808,563	+				-0.3
3,808,563	+				+0.6
3,808,564	-				+0.0
3,808,569	-				+0.7
3,808,582	+				+0.1
3,808,588	+				-0.9
3,808,588	+				-0.5
3,808,589	-				-1.4
3,808,734	+		PFR28_03298	0.23	+0.1
3,808,734	+		PFR28_03298	0.23	-0.8
3,808,734	+		PFR28_03298	0.23	-0.0
3,808,734	+		PFR28_03298	0.23	-1.2
3,808,734	+		PFR28_03298	0.23	+0.1
3,808,734	+		PFR28_03298	0.23	-0.4
3,808,734	+		PFR28_03298	0.23	-2.3
3,808,734	+		PFR28_03298	0.23	-0.4
3,808,734	+		PFR28_03298	0.23	-3.7
3,808,734	+		PFR28_03298	0.23	-2.7
3,808,734	+		PFR28_03298	0.23	-0.5
3,808,734	+		PFR28_03298	0.23	-1.7
3,808,734	+		PFR28_03298	0.23	-0.9
3,808,734	+		PFR28_03298	0.23	-0.8
3,808,734	+		PFR28_03298	0.23	-3.4
3,808,734	+		PFR28_03298	0.23	-4.0
3,808,735	-		PFR28_03298	0.23	-1.1
3,808,735	-		PFR28_03298	0.23	-1.0
3,808,735	-		PFR28_03298	0.23	-2.4
3,808,735	-		PFR28_03298	0.23	-2.3
3,808,735	-		PFR28_03298	0.23	-1.9
3,808,735	-		PFR28_03298	0.23	-1.0
3,808,735	-		PFR28_03298	0.23	-1.7
3,808,735	-		PFR28_03298	0.23	-0.3
3,808,735	-		PFR28_03298	0.23	-2.6
3,808,735	-		PFR28_03298	0.23	-0.8
3,808,735	-		PFR28_03298	0.23	+0.4
3,808,735	-		PFR28_03298	0.23	+1.3
3,808,735	-		PFR28_03298	0.23	-1.5
3,808,735	-		PFR28_03298	0.23	-1.3
3,808,735	-		PFR28_03298	0.23	-0.4
3,808,735	-		PFR28_03298	0.23	-0.9
3,808,735	-		PFR28_03298	0.23	-1.2
3,808,737	-		PFR28_03298	0.24	+0.1
3,808,895	+		PFR28_03298	0.50	-0.4
3,808,896	-		PFR28_03298	0.50	+0.7
3,809,190	+				-0.5
3,809,202	+				-3.0
3,809,202	+				+0.4
3,809,202	+				+0.3
3,809,202	+				-1.1
3,809,203	-				-1.0
3,809,203	-				-0.1
3,809,203	-				-1.8
3,809,305	+		PFR28_03299	0.11	+1.5
3,809,431	+		PFR28_03299	0.24	+0.6
3,809,554	+		PFR28_03299	0.37	-0.5
3,809,554	+		PFR28_03299	0.37	+0.4
3,809,554	+		PFR28_03299	0.37	-1.5
3,809,554	+		PFR28_03299	0.37	+0.6
3,809,554	+		PFR28_03299	0.37	+1.3
3,809,554	+		PFR28_03299	0.37	-1.4
3,809,554	+		PFR28_03299	0.37	+0.3
3,809,555	-		PFR28_03299	0.37	+0.4
3,809,555	-		PFR28_03299	0.37	-3.1
3,809,555	-		PFR28_03299	0.37	+0.1
3,809,565	-		PFR28_03299	0.38	+0.3
3,809,565	-		PFR28_03299	0.38	-0.9
3,809,565	-		PFR28_03299	0.38	-0.3
3,809,687	+		PFR28_03299	0.51	+0.7
3,809,687	+		PFR28_03299	0.51	-0.2
3,809,687	+		PFR28_03299	0.51	+0.2
3,809,687	+		PFR28_03299	0.51	-1.4
3,809,688	-		PFR28_03299	0.51	+1.5
3,809,688	-		PFR28_03299	0.51	+0.1
3,809,688	-		PFR28_03299	0.51	+0.8
3,809,745	+		PFR28_03299	0.57	-0.4
3,809,745	+		PFR28_03299	0.57	+0.6
3,809,745	+		PFR28_03299	0.57	-1.3
3,809,772	-		PFR28_03299	0.60	+0.2
3,809,976	+		PFR28_03299	0.81	+0.7
3,809,976	+		PFR28_03299	0.81	-1.1
3,810,056	-		PFR28_03299	0.90	+0.9
3,810,056	-		PFR28_03299	0.90	-1.9
3,810,095	+				-0.5
3,810,106	-				+0.6
3,810,128	+				+0.8
3,810,128	+				+1.2
3,810,128	+				-0.5
3,810,128	+				+1.2
3,810,129	-				-0.6
3,810,129	-				-0.0
3,810,129	-				+0.7
3,810,129	-				-0.2
3,810,129	-				-0.2
3,810,129	-				-1.8
3,810,131	-				-0.1