Experiment: m.b. Dimethyl Sulfoxide 8 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2763 and Echvi_2764 are separated by 17 nucleotides Echvi_2764 and Echvi_2765 are separated by 226 nucleotides Echvi_2765 and Echvi_2766 are separated by 28 nucleotides
Echvi_2763: Echvi_2763 - SusD family., at 3,296,104 to 3,297,969
_2763
Echvi_2764: Echvi_2764 - hypothetical protein, at 3,297,987 to 3,298,691
_2764
Echvi_2765: Echvi_2765 - Beta-xylosidase, at 3,298,918 to 3,299,982
_2765
Echvi_2766: Echvi_2766 - hypothetical protein, at 3,300,011 to 3,302,098
_2766
Position (kb)
3298
3299
3300 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3297.927 kb on - strand at 3297.927 kb on - strand at 3297.942 kb on + strand at 3297.974 kb on - strand at 3298.054 kb on - strand at 3298.059 kb on - strand, within Echvi_2764 at 3298.062 kb on + strand, within Echvi_2764 at 3298.062 kb on + strand, within Echvi_2764 at 3298.063 kb on - strand, within Echvi_2764 at 3298.094 kb on + strand, within Echvi_2764 at 3298.102 kb on - strand, within Echvi_2764 at 3298.102 kb on - strand, within Echvi_2764 at 3298.124 kb on - strand, within Echvi_2764 at 3298.128 kb on + strand, within Echvi_2764 at 3298.129 kb on - strand, within Echvi_2764 at 3298.130 kb on + strand, within Echvi_2764 at 3298.130 kb on + strand, within Echvi_2764 at 3298.131 kb on - strand, within Echvi_2764 at 3298.131 kb on - strand, within Echvi_2764 at 3298.140 kb on + strand, within Echvi_2764 at 3298.140 kb on + strand, within Echvi_2764 at 3298.275 kb on - strand, within Echvi_2764 at 3298.362 kb on + strand, within Echvi_2764 at 3298.362 kb on + strand, within Echvi_2764 at 3298.363 kb on - strand, within Echvi_2764 at 3298.363 kb on - strand, within Echvi_2764 at 3298.365 kb on + strand, within Echvi_2764 at 3298.366 kb on - strand, within Echvi_2764 at 3298.366 kb on - strand, within Echvi_2764 at 3298.366 kb on - strand, within Echvi_2764 at 3298.366 kb on - strand, within Echvi_2764 at 3298.367 kb on + strand, within Echvi_2764 at 3298.367 kb on + strand, within Echvi_2764 at 3298.367 kb on + strand, within Echvi_2764 at 3298.367 kb on + strand, within Echvi_2764 at 3298.367 kb on + strand, within Echvi_2764 at 3298.368 kb on - strand, within Echvi_2764 at 3298.368 kb on - strand, within Echvi_2764 at 3298.368 kb on - strand, within Echvi_2764 at 3298.368 kb on - strand, within Echvi_2764 at 3298.382 kb on - strand, within Echvi_2764 at 3298.385 kb on + strand, within Echvi_2764 at 3298.400 kb on + strand, within Echvi_2764 at 3298.471 kb on + strand, within Echvi_2764 at 3298.472 kb on - strand, within Echvi_2764 at 3298.480 kb on - strand, within Echvi_2764 at 3298.511 kb on + strand, within Echvi_2764 at 3298.547 kb on + strand, within Echvi_2764 at 3298.548 kb on - strand, within Echvi_2764 at 3298.548 kb on - strand, within Echvi_2764 at 3298.565 kb on + strand, within Echvi_2764 at 3298.611 kb on + strand, within Echvi_2764 at 3298.612 kb on - strand, within Echvi_2764 at 3298.612 kb on - strand, within Echvi_2764 at 3298.612 kb on - strand, within Echvi_2764 at 3298.703 kb on - strand at 3298.722 kb on + strand at 3298.794 kb on + strand at 3298.836 kb on + strand at 3298.837 kb on - strand at 3298.844 kb on - strand at 3298.890 kb on - strand at 3298.890 kb on - strand at 3298.892 kb on - strand at 3298.892 kb on - strand at 3298.892 kb on - strand at 3298.931 kb on + strand at 3298.931 kb on + strand at 3298.934 kb on + strand at 3298.935 kb on - strand at 3298.948 kb on + strand at 3298.953 kb on - strand at 3298.965 kb on + strand at 3298.965 kb on + strand at 3298.965 kb on + strand at 3298.970 kb on + strand at 3298.971 kb on - strand at 3299.033 kb on + strand, within Echvi_2765 at 3299.033 kb on + strand, within Echvi_2765 at 3299.034 kb on - strand, within Echvi_2765 at 3299.044 kb on + strand, within Echvi_2765 at 3299.045 kb on - strand, within Echvi_2765 at 3299.049 kb on + strand, within Echvi_2765 at 3299.049 kb on + strand, within Echvi_2765 at 3299.050 kb on - strand, within Echvi_2765 at 3299.111 kb on - strand, within Echvi_2765 at 3299.186 kb on + strand, within Echvi_2765 at 3299.277 kb on - strand, within Echvi_2765 at 3299.277 kb on - strand, within Echvi_2765 at 3299.292 kb on + strand, within Echvi_2765 at 3299.293 kb on - strand, within Echvi_2765 at 3299.293 kb on - strand, within Echvi_2765 at 3299.296 kb on + strand, within Echvi_2765 at 3299.297 kb on - strand, within Echvi_2765 at 3299.297 kb on - strand, within Echvi_2765 at 3299.297 kb on - strand, within Echvi_2765 at 3299.297 kb on - strand, within Echvi_2765 at 3299.297 kb on - strand, within Echvi_2765 at 3299.380 kb on + strand, within Echvi_2765 at 3299.414 kb on + strand, within Echvi_2765 at 3299.415 kb on - strand, within Echvi_2765 at 3299.437 kb on + strand, within Echvi_2765 at 3299.489 kb on + strand, within Echvi_2765 at 3299.490 kb on - strand, within Echvi_2765 at 3299.490 kb on - strand, within Echvi_2765 at 3299.490 kb on - strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.492 kb on - strand, within Echvi_2765 at 3299.492 kb on - strand, within Echvi_2765 at 3299.492 kb on - strand, within Echvi_2765 at 3299.492 kb on - strand, within Echvi_2765 at 3299.492 kb on - strand, within Echvi_2765 at 3299.492 kb on - strand, within Echvi_2765 at 3299.492 kb on - strand, within Echvi_2765 at 3299.492 kb on - strand, within Echvi_2765 at 3299.492 kb on - strand, within Echvi_2765 at 3299.572 kb on + strand, within Echvi_2765 at 3299.572 kb on + strand, within Echvi_2765 at 3299.573 kb on - strand, within Echvi_2765 at 3299.573 kb on - strand, within Echvi_2765 at 3299.573 kb on - strand, within Echvi_2765 at 3299.573 kb on - strand, within Echvi_2765 at 3299.573 kb on - strand, within Echvi_2765 at 3299.575 kb on - strand, within Echvi_2765 at 3299.581 kb on - strand, within Echvi_2765 at 3299.593 kb on + strand, within Echvi_2765 at 3299.810 kb on + strand, within Echvi_2765 at 3299.847 kb on - strand, within Echvi_2765 at 3299.869 kb on - strand, within Echvi_2765 at 3299.875 kb on - strand, within Echvi_2765 at 3299.875 kb on - strand, within Echvi_2765 at 3299.880 kb on + strand at 3299.880 kb on + strand at 3299.881 kb on - strand at 3299.881 kb on - strand at 3299.881 kb on - strand at 3299.956 kb on - strand at 3299.956 kb on - strand at 3299.981 kb on - strand at 3299.981 kb on - strand at 3299.992 kb on - strand at 3300.003 kb on + strand at 3300.010 kb on + strand at 3300.010 kb on + strand at 3300.010 kb on + strand at 3300.010 kb on + strand at 3300.010 kb on + strand at 3300.011 kb on - strand at 3300.014 kb on + strand at 3300.015 kb on - strand at 3300.078 kb on + strand at 3300.130 kb on + strand at 3300.170 kb on - strand at 3300.191 kb on - strand at 3300.191 kb on - strand at 3300.193 kb on + strand at 3300.291 kb on + strand, within Echvi_2766 at 3300.358 kb on + strand, within Echvi_2766 at 3300.359 kb on - strand, within Echvi_2766 at 3300.359 kb on - strand, within Echvi_2766 at 3300.409 kb on - strand, within Echvi_2766 at 3300.433 kb on + strand, within Echvi_2766 at 3300.437 kb on - strand, within Echvi_2766 at 3300.560 kb on + strand, within Echvi_2766 at 3300.561 kb on - strand, within Echvi_2766 at 3300.627 kb on - strand, within Echvi_2766 at 3300.627 kb on - strand, within Echvi_2766 at 3300.688 kb on + strand, within Echvi_2766 at 3300.697 kb on + strand, within Echvi_2766 at 3300.773 kb on + strand, within Echvi_2766 at 3300.773 kb on + strand, within Echvi_2766 at 3300.774 kb on - strand, within Echvi_2766 at 3300.774 kb on - strand, within Echvi_2766 at 3300.774 kb on - strand, within Echvi_2766 at 3300.774 kb on - strand, within Echvi_2766 at 3300.785 kb on + strand, within Echvi_2766 at 3300.785 kb on + strand, within Echvi_2766 at 3300.785 kb on + strand, within Echvi_2766 at 3300.786 kb on - strand, within Echvi_2766 at 3300.790 kb on - strand, within Echvi_2766 at 3300.808 kb on + strand, within Echvi_2766 at 3300.809 kb on - strand, within Echvi_2766 at 3300.809 kb on - strand, within Echvi_2766 at 3300.863 kb on - strand, within Echvi_2766 at 3300.865 kb on + strand, within Echvi_2766
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 8 vol% remove 3,297,927 - -0.9 3,297,927 - -0.3 3,297,942 + +1.1 3,297,974 - -0.5 3,298,054 - -0.6 3,298,059 - Echvi_2764 0.10 +0.2 3,298,062 + Echvi_2764 0.11 +0.5 3,298,062 + Echvi_2764 0.11 +0.2 3,298,063 - Echvi_2764 0.11 -1.1 3,298,094 + Echvi_2764 0.15 -1.5 3,298,102 - Echvi_2764 0.16 -0.5 3,298,102 - Echvi_2764 0.16 +0.2 3,298,124 - Echvi_2764 0.19 +0.4 3,298,128 + Echvi_2764 0.20 -1.7 3,298,129 - Echvi_2764 0.20 +0.2 3,298,130 + Echvi_2764 0.20 -0.7 3,298,130 + Echvi_2764 0.20 -0.7 3,298,131 - Echvi_2764 0.20 +0.9 3,298,131 - Echvi_2764 0.20 -0.3 3,298,140 + Echvi_2764 0.22 +0.1 3,298,140 + Echvi_2764 0.22 +0.4 3,298,275 - Echvi_2764 0.41 +0.0 3,298,362 + Echvi_2764 0.53 -0.4 3,298,362 + Echvi_2764 0.53 +1.1 3,298,363 - Echvi_2764 0.53 -0.5 3,298,363 - Echvi_2764 0.53 -0.9 3,298,365 + Echvi_2764 0.54 +0.1 3,298,366 - Echvi_2764 0.54 -0.0 3,298,366 - Echvi_2764 0.54 +0.1 3,298,366 - Echvi_2764 0.54 +0.4 3,298,366 - Echvi_2764 0.54 -0.3 3,298,367 + Echvi_2764 0.54 -0.2 3,298,367 + Echvi_2764 0.54 +3.3 3,298,367 + Echvi_2764 0.54 +0.5 3,298,367 + Echvi_2764 0.54 +1.5 3,298,367 + Echvi_2764 0.54 -0.8 3,298,368 - Echvi_2764 0.54 -1.1 3,298,368 - Echvi_2764 0.54 +0.1 3,298,368 - Echvi_2764 0.54 -0.2 3,298,368 - Echvi_2764 0.54 +1.0 3,298,382 - Echvi_2764 0.56 -0.7 3,298,385 + Echvi_2764 0.56 -3.3 3,298,400 + Echvi_2764 0.59 -1.0 3,298,471 + Echvi_2764 0.69 +0.5 3,298,472 - Echvi_2764 0.69 +0.5 3,298,480 - Echvi_2764 0.70 -0.2 3,298,511 + Echvi_2764 0.74 -1.1 3,298,547 + Echvi_2764 0.79 -0.5 3,298,548 - Echvi_2764 0.80 +1.5 3,298,548 - Echvi_2764 0.80 -0.6 3,298,565 + Echvi_2764 0.82 -2.2 3,298,611 + Echvi_2764 0.89 -1.4 3,298,612 - Echvi_2764 0.89 -0.2 3,298,612 - Echvi_2764 0.89 -0.6 3,298,612 - Echvi_2764 0.89 +0.2 3,298,703 - +0.2 3,298,722 + -0.2 3,298,794 + +0.9 3,298,836 + +0.4 3,298,837 - +0.1 3,298,844 - -1.8 3,298,890 - -1.0 3,298,890 - +0.6 3,298,892 - +1.1 3,298,892 - +0.8 3,298,892 - -0.5 3,298,931 + -0.4 3,298,931 + +0.8 3,298,934 + +0.7 3,298,935 - +0.3 3,298,948 + -2.6 3,298,953 - -0.4 3,298,965 + +1.5 3,298,965 + +0.2 3,298,965 + -0.3 3,298,970 + +0.3 3,298,971 - -0.2 3,299,033 + Echvi_2765 0.11 +0.5 3,299,033 + Echvi_2765 0.11 -1.1 3,299,034 - Echvi_2765 0.11 +1.0 3,299,044 + Echvi_2765 0.12 -0.2 3,299,045 - Echvi_2765 0.12 +0.5 3,299,049 + Echvi_2765 0.12 -0.1 3,299,049 + Echvi_2765 0.12 -0.0 3,299,050 - Echvi_2765 0.12 +0.4 3,299,111 - Echvi_2765 0.18 +0.2 3,299,186 + Echvi_2765 0.25 +0.1 3,299,277 - Echvi_2765 0.34 +0.0 3,299,277 - Echvi_2765 0.34 -0.7 3,299,292 + Echvi_2765 0.35 -0.0 3,299,293 - Echvi_2765 0.35 -1.8 3,299,293 - Echvi_2765 0.35 -0.0 3,299,296 + Echvi_2765 0.35 -0.3 3,299,297 - Echvi_2765 0.36 +0.5 3,299,297 - Echvi_2765 0.36 -1.2 3,299,297 - Echvi_2765 0.36 +0.4 3,299,297 - Echvi_2765 0.36 +1.2 3,299,297 - Echvi_2765 0.36 -0.1 3,299,380 + Echvi_2765 0.43 +0.5 3,299,414 + Echvi_2765 0.47 +0.6 3,299,415 - Echvi_2765 0.47 +1.1 3,299,437 + Echvi_2765 0.49 -0.1 3,299,489 + Echvi_2765 0.54 +0.4 3,299,490 - Echvi_2765 0.54 -0.1 3,299,490 - Echvi_2765 0.54 -0.2 3,299,490 - Echvi_2765 0.54 -0.6 3,299,491 + Echvi_2765 0.54 -0.8 3,299,491 + Echvi_2765 0.54 -0.2 3,299,491 + Echvi_2765 0.54 -3.3 3,299,491 + Echvi_2765 0.54 -1.2 3,299,491 + Echvi_2765 0.54 +0.0 3,299,491 + Echvi_2765 0.54 +1.5 3,299,491 + Echvi_2765 0.54 -1.3 3,299,491 + Echvi_2765 0.54 +0.9 3,299,491 + Echvi_2765 0.54 -1.6 3,299,491 + Echvi_2765 0.54 -0.3 3,299,491 + Echvi_2765 0.54 +0.5 3,299,491 + Echvi_2765 0.54 -0.2 3,299,491 + Echvi_2765 0.54 +0.7 3,299,492 - Echvi_2765 0.54 +0.6 3,299,492 - Echvi_2765 0.54 -0.7 3,299,492 - Echvi_2765 0.54 -0.1 3,299,492 - Echvi_2765 0.54 -0.6 3,299,492 - Echvi_2765 0.54 +0.0 3,299,492 - Echvi_2765 0.54 +0.2 3,299,492 - Echvi_2765 0.54 -1.0 3,299,492 - Echvi_2765 0.54 +0.2 3,299,492 - Echvi_2765 0.54 -0.5 3,299,572 + Echvi_2765 0.61 -0.1 3,299,572 + Echvi_2765 0.61 +0.3 3,299,573 - Echvi_2765 0.62 +0.3 3,299,573 - Echvi_2765 0.62 -0.6 3,299,573 - Echvi_2765 0.62 +0.3 3,299,573 - Echvi_2765 0.62 -1.1 3,299,573 - Echvi_2765 0.62 -0.6 3,299,575 - Echvi_2765 0.62 -1.1 3,299,581 - Echvi_2765 0.62 -0.6 3,299,593 + Echvi_2765 0.63 +0.1 3,299,810 + Echvi_2765 0.84 -0.0 3,299,847 - Echvi_2765 0.87 +0.6 3,299,869 - Echvi_2765 0.89 -2.1 3,299,875 - Echvi_2765 0.90 +0.3 3,299,875 - Echvi_2765 0.90 +0.1 3,299,880 + +0.1 3,299,880 + +0.3 3,299,881 - -0.1 3,299,881 - -0.0 3,299,881 - +1.8 3,299,956 - +0.3 3,299,956 - -0.4 3,299,981 - -1.6 3,299,981 - +0.2 3,299,992 - +0.1 3,300,003 + -0.3 3,300,010 + +0.6 3,300,010 + -0.2 3,300,010 + -0.1 3,300,010 + -0.2 3,300,010 + +0.2 3,300,011 - -0.2 3,300,014 + -0.4 3,300,015 - -0.3 3,300,078 + +1.7 3,300,130 + -1.0 3,300,170 - -1.0 3,300,191 - -0.5 3,300,191 - -1.4 3,300,193 + -0.5 3,300,291 + Echvi_2766 0.13 -0.5 3,300,358 + Echvi_2766 0.17 -0.1 3,300,359 - Echvi_2766 0.17 +1.0 3,300,359 - Echvi_2766 0.17 +0.2 3,300,409 - Echvi_2766 0.19 -0.4 3,300,433 + Echvi_2766 0.20 +0.8 3,300,437 - Echvi_2766 0.20 +0.0 3,300,560 + Echvi_2766 0.26 +1.5 3,300,561 - Echvi_2766 0.26 +0.5 3,300,627 - Echvi_2766 0.30 +0.7 3,300,627 - Echvi_2766 0.30 +1.5 3,300,688 + Echvi_2766 0.32 +0.1 3,300,697 + Echvi_2766 0.33 +0.1 3,300,773 + Echvi_2766 0.36 +0.2 3,300,773 + Echvi_2766 0.36 +0.1 3,300,774 - Echvi_2766 0.37 +1.1 3,300,774 - Echvi_2766 0.37 -0.2 3,300,774 - Echvi_2766 0.37 +0.2 3,300,774 - Echvi_2766 0.37 +1.5 3,300,785 + Echvi_2766 0.37 +0.3 3,300,785 + Echvi_2766 0.37 -0.5 3,300,785 + Echvi_2766 0.37 +0.2 3,300,786 - Echvi_2766 0.37 +0.4 3,300,790 - Echvi_2766 0.37 -0.1 3,300,808 + Echvi_2766 0.38 -0.8 3,300,809 - Echvi_2766 0.38 +0.2 3,300,809 - Echvi_2766 0.38 -0.5 3,300,863 - Echvi_2766 0.41 +0.8 3,300,865 + Echvi_2766 0.41 +0.3
Or see this region's nucleotide sequence