Experiment: m.b. Dimethyl Sulfoxide 8 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0662 and Echvi_0663 are separated by 143 nucleotides Echvi_0663 and Echvi_0664 are separated by 104 nucleotides Echvi_0664 and Echvi_0665 are separated by 46 nucleotides
Echvi_0662: Echvi_0662 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 745,351 to 746,112
_0662
Echvi_0663: Echvi_0663 - Predicted methyltransferases, at 746,256 to 746,969
_0663
Echvi_0664: Echvi_0664 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 747,074 to 747,772
_0664
Echvi_0665: Echvi_0665 - FOG: Transposase and inactivated derivatives, at 747,819 to 749,051
_0665
Position (kb) 746
747 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 745.306 kb on + strand at 745.359 kb on - strand at 745.366 kb on - strand at 745.462 kb on + strand, within Echvi_0662 at 745.525 kb on + strand, within Echvi_0662 at 745.557 kb on + strand, within Echvi_0662 at 745.585 kb on + strand, within Echvi_0662 at 745.585 kb on + strand, within Echvi_0662 at 745.588 kb on - strand, within Echvi_0662 at 745.634 kb on + strand, within Echvi_0662 at 745.634 kb on + strand, within Echvi_0662 at 745.635 kb on - strand, within Echvi_0662 at 745.930 kb on + strand, within Echvi_0662 at 745.930 kb on + strand, within Echvi_0662 at 745.973 kb on - strand, within Echvi_0662 at 745.973 kb on - strand, within Echvi_0662 at 745.973 kb on - strand, within Echvi_0662 at 745.974 kb on + strand, within Echvi_0662 at 745.975 kb on - strand, within Echvi_0662 at 746.020 kb on + strand, within Echvi_0662 at 746.208 kb on - strand at 746.274 kb on + strand at 746.274 kb on + strand at 746.361 kb on + strand, within Echvi_0663 at 746.362 kb on - strand, within Echvi_0663 at 746.397 kb on - strand, within Echvi_0663 at 746.454 kb on - strand, within Echvi_0663 at 746.723 kb on + strand, within Echvi_0663 at 746.723 kb on + strand, within Echvi_0663 at 746.723 kb on + strand, within Echvi_0663 at 746.991 kb on - strand at 747.003 kb on + strand at 747.003 kb on + strand at 747.004 kb on - strand at 747.007 kb on + strand at 747.007 kb on + strand at 747.008 kb on - strand at 747.008 kb on - strand at 747.051 kb on + strand at 747.157 kb on + strand, within Echvi_0664 at 747.159 kb on + strand, within Echvi_0664 at 747.160 kb on - strand, within Echvi_0664 at 747.160 kb on - strand, within Echvi_0664 at 747.210 kb on + strand, within Echvi_0664 at 747.210 kb on + strand, within Echvi_0664 at 747.211 kb on - strand, within Echvi_0664 at 747.211 kb on - strand, within Echvi_0664 at 747.234 kb on + strand, within Echvi_0664 at 747.234 kb on + strand, within Echvi_0664 at 747.235 kb on - strand, within Echvi_0664 at 747.235 kb on - strand, within Echvi_0664 at 747.289 kb on + strand, within Echvi_0664 at 747.427 kb on + strand, within Echvi_0664 at 747.427 kb on + strand, within Echvi_0664 at 747.427 kb on + strand, within Echvi_0664 at 747.427 kb on + strand, within Echvi_0664 at 747.428 kb on - strand, within Echvi_0664 at 747.428 kb on - strand, within Echvi_0664 at 747.450 kb on + strand, within Echvi_0664 at 747.451 kb on - strand, within Echvi_0664 at 747.537 kb on + strand, within Echvi_0664 at 747.538 kb on - strand, within Echvi_0664 at 747.613 kb on - strand, within Echvi_0664 at 747.613 kb on - strand, within Echvi_0664 at 747.613 kb on - strand, within Echvi_0664 at 747.659 kb on + strand, within Echvi_0664 at 747.659 kb on + strand, within Echvi_0664 at 747.671 kb on + strand, within Echvi_0664 at 747.671 kb on + strand, within Echvi_0664 at 747.728 kb on + strand at 747.729 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 8 vol% remove 745,306 + -1.1 745,359 - -0.3 745,366 - -0.7 745,462 + Echvi_0662 0.15 -2.2 745,525 + Echvi_0662 0.23 -0.6 745,557 + Echvi_0662 0.27 +1.5 745,585 + Echvi_0662 0.31 +1.1 745,585 + Echvi_0662 0.31 +0.9 745,588 - Echvi_0662 0.31 +0.1 745,634 + Echvi_0662 0.37 +1.1 745,634 + Echvi_0662 0.37 -1.3 745,635 - Echvi_0662 0.37 +0.5 745,930 + Echvi_0662 0.76 -0.7 745,930 + Echvi_0662 0.76 +0.7 745,973 - Echvi_0662 0.82 +0.5 745,973 - Echvi_0662 0.82 -1.7 745,973 - Echvi_0662 0.82 -0.6 745,974 + Echvi_0662 0.82 -3.1 745,975 - Echvi_0662 0.82 +0.4 746,020 + Echvi_0662 0.88 +1.1 746,208 - -0.8 746,274 + -0.8 746,274 + -1.1 746,361 + Echvi_0663 0.15 -0.7 746,362 - Echvi_0663 0.15 -0.3 746,397 - Echvi_0663 0.20 +0.3 746,454 - Echvi_0663 0.28 -0.8 746,723 + Echvi_0663 0.65 -0.6 746,723 + Echvi_0663 0.65 -1.7 746,723 + Echvi_0663 0.65 +0.4 746,991 - -0.4 747,003 + -0.9 747,003 + +0.7 747,004 - -1.1 747,007 + -0.1 747,007 + -0.2 747,008 - +1.4 747,008 - -0.1 747,051 + -0.6 747,157 + Echvi_0664 0.12 -0.0 747,159 + Echvi_0664 0.12 -0.1 747,160 - Echvi_0664 0.12 -0.6 747,160 - Echvi_0664 0.12 +0.7 747,210 + Echvi_0664 0.19 -0.1 747,210 + Echvi_0664 0.19 +0.9 747,211 - Echvi_0664 0.20 -0.6 747,211 - Echvi_0664 0.20 +0.9 747,234 + Echvi_0664 0.23 +0.7 747,234 + Echvi_0664 0.23 +0.6 747,235 - Echvi_0664 0.23 +1.7 747,235 - Echvi_0664 0.23 +0.4 747,289 + Echvi_0664 0.31 +1.0 747,427 + Echvi_0664 0.51 +0.1 747,427 + Echvi_0664 0.51 +0.1 747,427 + Echvi_0664 0.51 +2.7 747,427 + Echvi_0664 0.51 -1.3 747,428 - Echvi_0664 0.51 -0.1 747,428 - Echvi_0664 0.51 -1.1 747,450 + Echvi_0664 0.54 +0.5 747,451 - Echvi_0664 0.54 -0.9 747,537 + Echvi_0664 0.66 +0.3 747,538 - Echvi_0664 0.66 -0.3 747,613 - Echvi_0664 0.77 +0.7 747,613 - Echvi_0664 0.77 -1.6 747,613 - Echvi_0664 0.77 +0.7 747,659 + Echvi_0664 0.84 +1.1 747,659 + Echvi_0664 0.84 -0.8 747,671 + Echvi_0664 0.85 -0.4 747,671 + Echvi_0664 0.85 -0.9 747,728 + +0.0 747,729 - -0.9
Or see this region's nucleotide sequence