Strain Fitness in Agrobacterium fabrum C58 around Atu1277

Experiment: D-Saccharic potassium salt (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAtu1276 and Atu1277 are separated by 13 nucleotidesAtu1277 and Atu1278 are separated by 36 nucleotidesAtu1278 and Atu1279 are separated by 137 nucleotides Atu1276: Atu1276 - NADH ubiquinone oxidoreductase chain G, at 1,262,252 to 1,264,333 Atu1276 Atu1277: Atu1277 - NADH ubiquinone oxidoreductase I chain H, at 1,264,347 to 1,265,393 Atu1277 Atu1278: Atu1278 - NADH ubiquinone oxidoreductase chain I, at 1,265,430 to 1,265,921 Atu1278 Atu1279: Atu1279 - NADH ubiquinone oxidoreductase chain J, at 1,266,059 to 1,266,673 Atu1279 Position (kb) 1264 1265 1266Strain fitness (log2 ratio) -1 0 1 2at 1264.295 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Saccharic potassium salt (C)
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1,264,295 + +2.3

Or see this region's nucleotide sequence