Strain Fitness in Agrobacterium fabrum C58 around Atu1275

Experiment: D-Saccharic potassium salt (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAtu1274 and Atu1275 are separated by 10 nucleotidesAtu1275 and Atu1276 are separated by 149 nucleotides Atu1274: Atu1274 - NADH ubiquinone oxidoreductase chain E, at 1,259,678 to 1,260,787 Atu1274 Atu1275: Atu1275 - NADH ubiquinone oxidoreductase chain F, at 1,260,798 to 1,262,102 Atu1275 Atu1276: Atu1276 - NADH ubiquinone oxidoreductase chain G, at 1,262,252 to 1,264,333 Atu1276 Position (kb) 1260 1261 1262 1263Strain fitness (log2 ratio) -1 0 1 2at 1262.062 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Saccharic potassium salt (C)
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1,262,062 + +2.6

Or see this region's nucleotide sequence