Strain Fitness in Escherichia coli BW25113 around b3031

Experiment: Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.001 mg/ml
3,173,456	+				-0.2
3,173,509	-	yqiA	b3031	0.11	-0.4
3,173,533	-	yqiA	b3031	0.15	+1.2
3,173,571	+	yqiA	b3031	0.21	-1.2
3,173,682	+	yqiA	b3031	0.40	-0.8
3,173,697	+	yqiA	b3031	0.43	+0.6
3,173,705	-	yqiA	b3031	0.44	-1.1
3,173,705	-	yqiA	b3031	0.44	+1.0
3,173,705	-	yqiA	b3031	0.44	-0.0
3,173,705	-	yqiA	b3031	0.44	-0.0
3,173,705	-	yqiA	b3031	0.44	-1.4
3,173,724	-	yqiA	b3031	0.48	-0.5
3,173,762	+	yqiA	b3031	0.54	+0.4
3,173,802	+	yqiA	b3031	0.61	+2.6
3,173,805	+	yqiA	b3031	0.62	-1.4
3,173,835	+	yqiA	b3031	0.67	-1.4
3,173,835	+	yqiA	b3031	0.67	-0.4
3,173,999	-				+0.2
3,174,018	+				+0.4
3,174,018	+				+0.7
3,174,070	+				-0.4
3,174,070	+				-1.7
3,174,125	+	cpdA	b3032	0.12	-0.8
3,174,140	+	cpdA	b3032	0.14	-0.0
3,174,150	+	cpdA	b3032	0.15	+0.4
3,174,156	+	cpdA	b3032	0.15	+0.9
3,174,178	-	cpdA	b3032	0.18	-2.0
3,174,221	-	cpdA	b3032	0.23	-1.4
3,174,271	-	cpdA	b3032	0.29	-0.4
3,174,271	-	cpdA	b3032	0.29	+0.6
3,174,303	-	cpdA	b3032	0.33	-0.0
3,174,332	+	cpdA	b3032	0.37	-1.0
3,174,332	+	cpdA	b3032	0.37	+0.6
3,174,373	-	cpdA	b3032	0.42	-0.6
3,174,373	-	cpdA	b3032	0.42	+0.6
3,174,405	+	cpdA	b3032	0.46	+0.5
3,174,433	-	cpdA	b3032	0.49	+0.6
3,174,457	+	cpdA	b3032	0.52	+0.2
3,174,503	+	cpdA	b3032	0.57	+0.1
3,174,506	+	cpdA	b3032	0.58	-0.0
3,174,647	+	cpdA	b3032	0.75	-1.8
3,174,694	+	cpdA	b3032	0.80	-2.0
3,174,749	+	cpdA	b3032	0.87	-0.9
3,174,749	+	cpdA	b3032	0.87	+0.3
3,174,749	+	cpdA	b3032	0.87	+0.2
3,174,791	-				-0.6
3,174,825	-				-2.4
3,174,825	-				+1.6
3,174,905	-				-1.9
3,174,915	-				+0.2
3,174,927	-	yqiB	b3033	0.11	+1.0