Strain Fitness in Escherichia coli BW25113 around b2807

Experiment: Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.001 mg/ml
2,938,353	-	ygdE	b2806	0.17	-0.9
2,938,353	-	ygdE	b2806	0.17	+0.0
2,938,398	-	ygdE	b2806	0.21	-0.1
2,938,443	+	ygdE	b2806	0.25	-0.1
2,938,443	-	ygdE	b2806	0.25	-1.1
2,938,553	+	ygdE	b2806	0.35	-1.1
2,938,561	-	ygdE	b2806	0.36	-0.7
2,938,561	-	ygdE	b2806	0.36	-1.5
2,938,587	+	ygdE	b2806	0.38	-1.0
2,938,610	+	ygdE	b2806	0.40	+0.3
2,938,698	+	ygdE	b2806	0.48	-1.5
2,938,711	-	ygdE	b2806	0.50	-1.6
2,938,711	-	ygdE	b2806	0.50	-0.7
2,938,750	-	ygdE	b2806	0.53	-2.1
2,938,758	+	ygdE	b2806	0.54	-0.9
2,938,780	-	ygdE	b2806	0.56	+0.6
2,938,780	-	ygdE	b2806	0.56	-0.5
2,938,795	-	ygdE	b2806	0.57	-0.3
2,938,795	-	ygdE	b2806	0.57	-1.1
2,938,810	+	ygdE	b2806	0.59	+0.9
2,938,810	+	ygdE	b2806	0.59	+0.2
2,938,868	-	ygdE	b2806	0.64	-0.7
2,938,883	-	ygdE	b2806	0.65	-0.4
2,938,969	+	ygdE	b2806	0.73	-2.1
2,938,974	+	ygdE	b2806	0.73	-1.5
2,938,974	+	ygdE	b2806	0.73	-2.3
2,938,986	+	ygdE	b2806	0.75	-1.6
2,939,038	-	ygdE	b2806	0.79	-1.2
2,939,298	-	ygdD	b2807	0.10	+0.2
2,939,347	+	ygdD	b2807	0.22	-1.1
2,939,405	+	ygdD	b2807	0.37	+0.4
2,939,442	-	ygdD	b2807	0.46	+0.0
2,939,465	-	ygdD	b2807	0.52	+0.7
2,939,470	+	ygdD	b2807	0.54	-3.2
2,939,470	+	ygdD	b2807	0.54	-0.7
2,939,545	+	ygdD	b2807	0.72	+1.4
2,939,553	-	ygdD	b2807	0.74	+0.0
2,939,648	+				-2.5
2,939,648	+				-0.5
2,939,655	+				-0.9
2,939,663	-				+0.3
2,939,663	-				-1.7
2,939,778	-	gcvA	b2808	0.12	-0.1
2,939,778	-	gcvA	b2808	0.12	-1.1
2,939,804	+	gcvA	b2808	0.14	-0.1
2,939,912	-	gcvA	b2808	0.26	-2.0
2,939,914	-	gcvA	b2808	0.26	-1.5
2,939,982	-	gcvA	b2808	0.34	+1.4
2,939,982	-	gcvA	b2808	0.34	-2.0
2,939,985	-	gcvA	b2808	0.34	-2.6
2,939,987	-	gcvA	b2808	0.34	-1.1
2,940,001	+	gcvA	b2808	0.36	-1.7
2,940,068	+	gcvA	b2808	0.43	-2.3
2,940,171	-	gcvA	b2808	0.54	+0.9
2,940,171	-	gcvA	b2808	0.54	-0.7
2,940,289	+	gcvA	b2808	0.67	-1.6
2,940,331	+	gcvA	b2808	0.72	-1.5
2,940,399	-	gcvA	b2808	0.79	-1.5
2,940,417	-	gcvA	b2808	0.81	+0.4
2,940,477	-	gcvA	b2808	0.88	-2.0
2,940,522	+				-2.3
2,940,587	-				+0.7