Strain Fitness in Escherichia coli BW25113 around b1133
Experiment: Chloramphenicol 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,191,335 | - | hflD | b1132 | 0.19 | +0.3 |
1,191,604 | - | hflD | b1132 | 0.61 | +0.0 |
1,191,744 | - | hflD | b1132 | 0.83 | -0.7 |
1,191,776 | - | hflD | b1132 | 0.88 | +1.1 |
1,191,776 | - | hflD | b1132 | 0.88 | -0.2 |
1,191,780 | - | hflD | b1132 | 0.88 | +0.3 |
1,193,336 | - | ymfB | b1134 | 0.62 | +1.5 |
1,193,439 | - | ymfB | b1134 | 0.84 | +1.2 |
1,193,469 | + | +0.8 | |||
1,193,558 | - | -1.8 | |||
1,193,669 | - | ymfC | b1135 | 0.23 | +0.2 |
1,193,697 | - | ymfC | b1135 | 0.27 | -0.5 |
1,193,774 | - | ymfC | b1135 | 0.39 | +0.1 |
1,193,778 | + | ymfC | b1135 | 0.39 | -0.1 |
1,193,780 | - | ymfC | b1135 | 0.40 | +0.3 |
1,193,825 | + | ymfC | b1135 | 0.46 | -0.1 |
1,193,886 | - | ymfC | b1135 | 0.56 | +0.3 |
Or see this region's nucleotide sequence