Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_5093

Experiment: D-Gluconic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPfGW456L13_5092 and PfGW456L13_5093 are separated by 16 nucleotidesPfGW456L13_5093 and PfGW456L13_5094 are separated by 80 nucleotides PfGW456L13_5092 - Phosphoglucosamine mutase (EC 5.4.2.10), at 5,681,500 to 5,682,837 _5092 PfGW456L13_5093 - Dihydropteroate synthase (EC 2.5.1.15), at 5,682,854 to 5,683,633 _5093 PfGW456L13_5094 - Cell division protein FtsH (EC 3.4.24.-), at 5,683,714 to 5,685,624 _5094 Position (kb) 5682 5683 5684Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 5682.838 kb on - strandat 5682.838 kb on - strandat 5682.855 kb on + strandat 5683.708 kb on - strandat 5683.708 kb on - strandat 5683.716 kb on - strandat 5683.718 kb on - strandat 5683.718 kb on - strandat 5683.718 kb on - strandat 5683.718 kb on - strandat 5683.718 kb on - strandat 5683.718 kb on - strandat 5683.718 kb on - strandat 5683.718 kb on - strandat 5683.718 kb on - strandat 5683.718 kb on - strandat 5683.718 kb on - strandat 5683.789 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Gluconic Acid (C)
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5,682,838 - -0.5
5,682,838 - +0.1
5,682,855 + -1.3
5,683,708 - -0.2
5,683,708 - -4.2
5,683,716 - +2.0
5,683,718 - +1.2
5,683,718 - -1.1
5,683,718 - -1.7
5,683,718 - +0.1
5,683,718 - -0.4
5,683,718 - -0.3
5,683,718 - +0.7
5,683,718 - -3.0
5,683,718 - +1.1
5,683,718 - +0.1
5,683,718 - -0.1
5,683,789 - +0.5

Or see this region's nucleotide sequence