Experiment: D-Gluconic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_488 and PfGW456L13_489 overlap by 4 nucleotides PfGW456L13_489 and PfGW456L13_490 are separated by 127 nucleotides PfGW456L13_490 and PfGW456L13_491 are separated by 146 nucleotides
PfGW456L13_488 - Mobile element protein, at 558,305 to 558,610
_488
PfGW456L13_489 - Mobile element protein, at 558,607 to 559,443
_489
PfGW456L13_490 - GGDEF domain protein, at 559,571 to 561,490
_490
PfGW456L13_491 - Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1), at 561,637 to 562,821
_491
Position (kb) 559
560
561
562 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 559.467 kb on + strand at 559.467 kb on + strand at 559.529 kb on - strand at 559.572 kb on + strand at 559.573 kb on - strand at 559.573 kb on - strand at 559.573 kb on - strand at 559.573 kb on - strand at 559.573 kb on - strand at 559.855 kb on - strand, within PfGW456L13_490 at 560.023 kb on - strand, within PfGW456L13_490 at 560.280 kb on + strand, within PfGW456L13_490 at 560.281 kb on - strand, within PfGW456L13_490 at 560.281 kb on - strand, within PfGW456L13_490 at 560.283 kb on + strand, within PfGW456L13_490 at 560.284 kb on - strand, within PfGW456L13_490 at 560.284 kb on - strand, within PfGW456L13_490 at 560.373 kb on + strand, within PfGW456L13_490 at 560.373 kb on + strand, within PfGW456L13_490 at 560.382 kb on + strand, within PfGW456L13_490 at 560.495 kb on + strand, within PfGW456L13_490 at 560.518 kb on + strand, within PfGW456L13_490 at 560.518 kb on + strand, within PfGW456L13_490 at 560.600 kb on + strand, within PfGW456L13_490 at 560.600 kb on + strand, within PfGW456L13_490 at 560.601 kb on - strand, within PfGW456L13_490 at 560.601 kb on - strand, within PfGW456L13_490 at 560.601 kb on - strand, within PfGW456L13_490 at 560.601 kb on - strand, within PfGW456L13_490 at 560.702 kb on - strand, within PfGW456L13_490 at 560.702 kb on - strand, within PfGW456L13_490 at 560.702 kb on - strand, within PfGW456L13_490 at 560.919 kb on + strand, within PfGW456L13_490 at 560.919 kb on + strand, within PfGW456L13_490 at 560.919 kb on + strand, within PfGW456L13_490 at 560.919 kb on + strand, within PfGW456L13_490 at 560.920 kb on - strand, within PfGW456L13_490 at 560.976 kb on + strand, within PfGW456L13_490 at 561.057 kb on + strand, within PfGW456L13_490 at 561.057 kb on + strand, within PfGW456L13_490 at 561.058 kb on - strand, within PfGW456L13_490 at 561.345 kb on + strand at 561.345 kb on + strand at 561.345 kb on + strand at 561.401 kb on + strand at 561.408 kb on + strand at 561.447 kb on + strand at 561.447 kb on + strand at 561.447 kb on + strand at 561.447 kb on + strand at 561.447 kb on + strand at 561.447 kb on + strand at 561.448 kb on - strand at 561.477 kb on + strand at 561.478 kb on - strand at 561.478 kb on - strand at 561.526 kb on - strand at 561.526 kb on - strand at 561.528 kb on - strand at 561.532 kb on + strand at 561.532 kb on + strand at 561.533 kb on - strand at 561.554 kb on + strand at 561.554 kb on + strand at 561.555 kb on - strand at 561.555 kb on - strand at 561.555 kb on - strand at 561.555 kb on - strand at 561.555 kb on - strand at 561.588 kb on + strand at 561.589 kb on - strand at 561.589 kb on - strand at 561.589 kb on - strand at 561.589 kb on - strand at 561.595 kb on - strand at 561.630 kb on - strand at 561.636 kb on + strand at 561.636 kb on + strand at 561.636 kb on + strand at 561.637 kb on - strand at 561.637 kb on - strand at 561.637 kb on - strand at 561.637 kb on - strand at 561.637 kb on - strand at 561.637 kb on - strand at 561.644 kb on - strand at 561.644 kb on - strand at 561.730 kb on + strand at 561.731 kb on - strand at 561.731 kb on - strand at 561.731 kb on - strand at 561.731 kb on - strand at 561.731 kb on - strand at 561.731 kb on - strand at 561.731 kb on - strand at 561.853 kb on - strand, within PfGW456L13_491 at 561.853 kb on - strand, within PfGW456L13_491 at 562.025 kb on - strand, within PfGW456L13_491 at 562.254 kb on + strand, within PfGW456L13_491 at 562.254 kb on + strand, within PfGW456L13_491 at 562.255 kb on - strand, within PfGW456L13_491 at 562.255 kb on - strand, within PfGW456L13_491 at 562.255 kb on - strand, within PfGW456L13_491 at 562.255 kb on - strand, within PfGW456L13_491 at 562.270 kb on + strand, within PfGW456L13_491 at 562.270 kb on + strand, within PfGW456L13_491 at 562.270 kb on + strand, within PfGW456L13_491 at 562.270 kb on + strand, within PfGW456L13_491 at 562.270 kb on + strand, within PfGW456L13_491 at 562.271 kb on - strand, within PfGW456L13_491 at 562.271 kb on - strand, within PfGW456L13_491 at 562.275 kb on + strand, within PfGW456L13_491 at 562.275 kb on + strand, within PfGW456L13_491 at 562.276 kb on - strand, within PfGW456L13_491 at 562.276 kb on - strand, within PfGW456L13_491 at 562.469 kb on - strand, within PfGW456L13_491
Per-strain Table
Position Strand Gene LocusTag Fraction D-Gluconic Acid (C) remove 559,467 + -1.2 559,467 + -0.3 559,529 - -0.1 559,572 + -1.7 559,573 - +0.6 559,573 - +1.4 559,573 - +0.2 559,573 - -1.9 559,573 - +0.4 559,855 - PfGW456L13_490 0.15 -0.6 560,023 - PfGW456L13_490 0.24 +0.7 560,280 + PfGW456L13_490 0.37 +0.6 560,281 - PfGW456L13_490 0.37 -4.1 560,281 - PfGW456L13_490 0.37 -2.0 560,283 + PfGW456L13_490 0.37 +0.8 560,284 - PfGW456L13_490 0.37 +0.6 560,284 - PfGW456L13_490 0.37 -1.4 560,373 + PfGW456L13_490 0.42 +0.1 560,373 + PfGW456L13_490 0.42 +0.1 560,382 + PfGW456L13_490 0.42 -2.7 560,495 + PfGW456L13_490 0.48 +2.2 560,518 + PfGW456L13_490 0.49 -0.1 560,518 + PfGW456L13_490 0.49 +0.2 560,600 + PfGW456L13_490 0.54 -0.0 560,600 + PfGW456L13_490 0.54 +0.6 560,601 - PfGW456L13_490 0.54 -0.2 560,601 - PfGW456L13_490 0.54 -2.7 560,601 - PfGW456L13_490 0.54 +1.3 560,601 - PfGW456L13_490 0.54 -0.9 560,702 - PfGW456L13_490 0.59 -0.6 560,702 - PfGW456L13_490 0.59 -3.0 560,702 - PfGW456L13_490 0.59 +2.4 560,919 + PfGW456L13_490 0.70 +0.7 560,919 + PfGW456L13_490 0.70 -0.1 560,919 + PfGW456L13_490 0.70 -0.7 560,919 + PfGW456L13_490 0.70 +1.7 560,920 - PfGW456L13_490 0.70 -2.1 560,976 + PfGW456L13_490 0.73 +1.0 561,057 + PfGW456L13_490 0.77 +2.6 561,057 + PfGW456L13_490 0.77 -1.2 561,058 - PfGW456L13_490 0.77 -0.8 561,345 + +0.7 561,345 + +0.1 561,345 + -2.7 561,401 + -2.2 561,408 + +2.7 561,447 + +1.0 561,447 + +0.2 561,447 + -0.4 561,447 + +0.2 561,447 + -2.8 561,447 + -4.0 561,448 - +0.6 561,477 + +0.1 561,478 - -0.4 561,478 - +1.5 561,526 - +0.1 561,526 - -2.2 561,528 - +0.5 561,532 + +1.1 561,532 + +1.6 561,533 - -0.7 561,554 + +1.0 561,554 + -1.8 561,555 - +0.3 561,555 - +0.5 561,555 - -2.1 561,555 - +0.3 561,555 - -2.3 561,588 + +2.3 561,589 - -1.0 561,589 - -0.5 561,589 - +0.5 561,589 - +1.6 561,595 - +1.6 561,630 - +0.6 561,636 + -2.8 561,636 + -3.6 561,636 + +0.3 561,637 - -1.5 561,637 - +1.0 561,637 - +1.0 561,637 - +0.7 561,637 - +0.5 561,637 - +2.0 561,644 - -1.7 561,644 - -3.1 561,730 + +0.1 561,731 - +0.4 561,731 - +0.6 561,731 - -0.6 561,731 - +0.5 561,731 - +0.6 561,731 - -2.4 561,731 - -1.8 561,853 - PfGW456L13_491 0.18 +1.1 561,853 - PfGW456L13_491 0.18 +0.4 562,025 - PfGW456L13_491 0.33 +2.7 562,254 + PfGW456L13_491 0.52 -1.8 562,254 + PfGW456L13_491 0.52 -0.8 562,255 - PfGW456L13_491 0.52 -1.3 562,255 - PfGW456L13_491 0.52 -1.5 562,255 - PfGW456L13_491 0.52 -1.2 562,255 - PfGW456L13_491 0.52 +1.5 562,270 + PfGW456L13_491 0.53 -0.9 562,270 + PfGW456L13_491 0.53 +1.5 562,270 + PfGW456L13_491 0.53 +0.6 562,270 + PfGW456L13_491 0.53 +0.5 562,270 + PfGW456L13_491 0.53 -0.7 562,271 - PfGW456L13_491 0.54 -0.6 562,271 - PfGW456L13_491 0.54 +1.4 562,275 + PfGW456L13_491 0.54 -2.5 562,275 + PfGW456L13_491 0.54 -0.8 562,276 - PfGW456L13_491 0.54 +0.0 562,276 - PfGW456L13_491 0.54 +0.0 562,469 - PfGW456L13_491 0.70 -0.2
Or see this region's nucleotide sequence