Experiment: D-Gluconic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_466 and PfGW456L13_467 are separated by 37 nucleotides PfGW456L13_467 and PfGW456L13_468 are separated by 55 nucleotides PfGW456L13_468 and PfGW456L13_469 are separated by 290 nucleotides
PfGW456L13_466 - hypothetical protein, at 534,759 to 535,982
_466
PfGW456L13_467 - Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR, at 536,020 to 536,946
_467
PfGW456L13_468 - FIG00953394: hypothetical protein, at 537,002 to 537,583
_468
PfGW456L13_469 - Biopolymer transport protein ExbD/TolR, at 537,874 to 538,275
_469
Position (kb) 536
537 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 535.089 kb on + strand, within PfGW456L13_466 at 535.090 kb on - strand, within PfGW456L13_466 at 535.090 kb on - strand, within PfGW456L13_466 at 535.091 kb on + strand, within PfGW456L13_466 at 535.091 kb on + strand, within PfGW456L13_466 at 535.091 kb on + strand, within PfGW456L13_466 at 535.092 kb on - strand, within PfGW456L13_466 at 535.123 kb on + strand, within PfGW456L13_466 at 535.124 kb on - strand, within PfGW456L13_466 at 535.201 kb on + strand, within PfGW456L13_466 at 535.201 kb on + strand, within PfGW456L13_466 at 535.202 kb on - strand, within PfGW456L13_466 at 535.230 kb on + strand, within PfGW456L13_466 at 535.230 kb on + strand, within PfGW456L13_466 at 535.231 kb on - strand, within PfGW456L13_466 at 535.262 kb on - strand, within PfGW456L13_466 at 535.262 kb on - strand, within PfGW456L13_466 at 535.262 kb on - strand, within PfGW456L13_466 at 535.286 kb on + strand, within PfGW456L13_466 at 535.333 kb on + strand, within PfGW456L13_466 at 535.333 kb on + strand, within PfGW456L13_466 at 535.334 kb on - strand, within PfGW456L13_466 at 535.492 kb on + strand, within PfGW456L13_466 at 535.542 kb on + strand, within PfGW456L13_466 at 535.543 kb on - strand, within PfGW456L13_466 at 535.569 kb on + strand, within PfGW456L13_466 at 535.569 kb on + strand, within PfGW456L13_466 at 535.570 kb on - strand, within PfGW456L13_466 at 535.570 kb on - strand, within PfGW456L13_466 at 535.570 kb on - strand, within PfGW456L13_466 at 535.575 kb on + strand, within PfGW456L13_466 at 535.614 kb on + strand, within PfGW456L13_466 at 535.615 kb on - strand, within PfGW456L13_466 at 535.723 kb on + strand, within PfGW456L13_466 at 535.724 kb on - strand, within PfGW456L13_466 at 535.854 kb on - strand, within PfGW456L13_466 at 535.919 kb on + strand at 536.021 kb on + strand at 536.022 kb on - strand at 536.024 kb on - strand at 536.025 kb on + strand at 536.095 kb on + strand at 536.108 kb on - strand at 536.173 kb on - strand, within PfGW456L13_467 at 536.300 kb on + strand, within PfGW456L13_467 at 536.300 kb on + strand, within PfGW456L13_467 at 536.301 kb on - strand, within PfGW456L13_467 at 536.301 kb on - strand, within PfGW456L13_467 at 536.301 kb on - strand, within PfGW456L13_467 at 536.301 kb on - strand, within PfGW456L13_467 at 536.301 kb on - strand, within PfGW456L13_467 at 536.315 kb on + strand, within PfGW456L13_467 at 536.315 kb on + strand, within PfGW456L13_467 at 536.393 kb on + strand, within PfGW456L13_467 at 536.394 kb on - strand, within PfGW456L13_467 at 536.576 kb on + strand, within PfGW456L13_467 at 536.576 kb on + strand, within PfGW456L13_467 at 536.576 kb on + strand, within PfGW456L13_467 at 536.576 kb on + strand, within PfGW456L13_467 at 536.576 kb on + strand, within PfGW456L13_467 at 536.576 kb on + strand, within PfGW456L13_467 at 536.576 kb on + strand, within PfGW456L13_467 at 536.576 kb on + strand, within PfGW456L13_467 at 536.576 kb on + strand, within PfGW456L13_467 at 536.576 kb on + strand, within PfGW456L13_467 at 536.577 kb on - strand, within PfGW456L13_467 at 536.577 kb on - strand, within PfGW456L13_467 at 536.577 kb on - strand, within PfGW456L13_467 at 536.577 kb on - strand, within PfGW456L13_467 at 536.577 kb on - strand, within PfGW456L13_467 at 536.577 kb on - strand, within PfGW456L13_467 at 536.577 kb on - strand, within PfGW456L13_467 at 536.578 kb on + strand, within PfGW456L13_467 at 536.578 kb on + strand, within PfGW456L13_467 at 536.636 kb on + strand, within PfGW456L13_467 at 536.637 kb on - strand, within PfGW456L13_467 at 536.637 kb on - strand, within PfGW456L13_467 at 536.676 kb on - strand, within PfGW456L13_467 at 536.700 kb on + strand, within PfGW456L13_467 at 536.833 kb on + strand, within PfGW456L13_467 at 536.833 kb on + strand, within PfGW456L13_467 at 536.833 kb on + strand, within PfGW456L13_467 at 536.833 kb on + strand, within PfGW456L13_467 at 536.833 kb on + strand, within PfGW456L13_467 at 536.833 kb on + strand, within PfGW456L13_467 at 536.834 kb on - strand, within PfGW456L13_467 at 536.834 kb on - strand, within PfGW456L13_467 at 536.834 kb on - strand, within PfGW456L13_467 at 536.991 kb on - strand at 536.991 kb on - strand at 537.054 kb on + strand at 537.055 kb on - strand at 537.055 kb on - strand at 537.142 kb on + strand, within PfGW456L13_468 at 537.142 kb on + strand, within PfGW456L13_468 at 537.623 kb on - strand at 537.624 kb on + strand at 537.624 kb on + strand at 537.624 kb on + strand at 537.624 kb on + strand at 537.625 kb on - strand at 537.625 kb on - strand at 537.625 kb on - strand at 537.625 kb on - strand at 537.625 kb on - strand at 537.625 kb on - strand at 537.625 kb on - strand at 537.625 kb on - strand at 537.638 kb on - strand at 537.675 kb on + strand at 537.822 kb on - strand at 537.885 kb on + strand at 537.903 kb on + strand at 537.903 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Gluconic Acid (C) remove 535,089 + PfGW456L13_466 0.27 +1.1 535,090 - PfGW456L13_466 0.27 -2.8 535,090 - PfGW456L13_466 0.27 +0.1 535,091 + PfGW456L13_466 0.27 -0.5 535,091 + PfGW456L13_466 0.27 +0.1 535,091 + PfGW456L13_466 0.27 -2.5 535,092 - PfGW456L13_466 0.27 -0.1 535,123 + PfGW456L13_466 0.30 +0.8 535,124 - PfGW456L13_466 0.30 +0.4 535,201 + PfGW456L13_466 0.36 +0.4 535,201 + PfGW456L13_466 0.36 +1.2 535,202 - PfGW456L13_466 0.36 -1.2 535,230 + PfGW456L13_466 0.38 +1.3 535,230 + PfGW456L13_466 0.38 +0.1 535,231 - PfGW456L13_466 0.39 -0.5 535,262 - PfGW456L13_466 0.41 +0.2 535,262 - PfGW456L13_466 0.41 -0.9 535,262 - PfGW456L13_466 0.41 +0.9 535,286 + PfGW456L13_466 0.43 -0.4 535,333 + PfGW456L13_466 0.47 -1.8 535,333 + PfGW456L13_466 0.47 -3.0 535,334 - PfGW456L13_466 0.47 +0.6 535,492 + PfGW456L13_466 0.60 -1.0 535,542 + PfGW456L13_466 0.64 +0.9 535,543 - PfGW456L13_466 0.64 -0.3 535,569 + PfGW456L13_466 0.66 +1.1 535,569 + PfGW456L13_466 0.66 +1.8 535,570 - PfGW456L13_466 0.66 -0.1 535,570 - PfGW456L13_466 0.66 +0.6 535,570 - PfGW456L13_466 0.66 -2.4 535,575 + PfGW456L13_466 0.67 -0.6 535,614 + PfGW456L13_466 0.70 -0.0 535,615 - PfGW456L13_466 0.70 +1.0 535,723 + PfGW456L13_466 0.79 -1.3 535,724 - PfGW456L13_466 0.79 +4.4 535,854 - PfGW456L13_466 0.89 +1.5 535,919 + +0.5 536,021 + +0.7 536,022 - +1.5 536,024 - +0.7 536,025 + -2.0 536,095 + +0.1 536,108 - +1.0 536,173 - PfGW456L13_467 0.17 -1.0 536,300 + PfGW456L13_467 0.30 -2.4 536,300 + PfGW456L13_467 0.30 -1.8 536,301 - PfGW456L13_467 0.30 +0.2 536,301 - PfGW456L13_467 0.30 -1.9 536,301 - PfGW456L13_467 0.30 +0.7 536,301 - PfGW456L13_467 0.30 -3.3 536,301 - PfGW456L13_467 0.30 +1.6 536,315 + PfGW456L13_467 0.32 -0.5 536,315 + PfGW456L13_467 0.32 +2.7 536,393 + PfGW456L13_467 0.40 -0.3 536,394 - PfGW456L13_467 0.40 +2.4 536,576 + PfGW456L13_467 0.60 +1.0 536,576 + PfGW456L13_467 0.60 +0.6 536,576 + PfGW456L13_467 0.60 -1.7 536,576 + PfGW456L13_467 0.60 -0.7 536,576 + PfGW456L13_467 0.60 -0.9 536,576 + PfGW456L13_467 0.60 +1.2 536,576 + PfGW456L13_467 0.60 +1.5 536,576 + PfGW456L13_467 0.60 -1.4 536,576 + PfGW456L13_467 0.60 +1.0 536,576 + PfGW456L13_467 0.60 +0.7 536,577 - PfGW456L13_467 0.60 +0.3 536,577 - PfGW456L13_467 0.60 +1.0 536,577 - PfGW456L13_467 0.60 +2.3 536,577 - PfGW456L13_467 0.60 -1.7 536,577 - PfGW456L13_467 0.60 +1.6 536,577 - PfGW456L13_467 0.60 -2.1 536,577 - PfGW456L13_467 0.60 +0.5 536,578 + PfGW456L13_467 0.60 -0.0 536,578 + PfGW456L13_467 0.60 -1.5 536,636 + PfGW456L13_467 0.66 +1.3 536,637 - PfGW456L13_467 0.67 +0.7 536,637 - PfGW456L13_467 0.67 -1.9 536,676 - PfGW456L13_467 0.71 -2.0 536,700 + PfGW456L13_467 0.73 +2.5 536,833 + PfGW456L13_467 0.88 -3.5 536,833 + PfGW456L13_467 0.88 -1.7 536,833 + PfGW456L13_467 0.88 -0.8 536,833 + PfGW456L13_467 0.88 -0.2 536,833 + PfGW456L13_467 0.88 +0.6 536,833 + PfGW456L13_467 0.88 -2.2 536,834 - PfGW456L13_467 0.88 +1.1 536,834 - PfGW456L13_467 0.88 +1.0 536,834 - PfGW456L13_467 0.88 -2.1 536,991 - +0.5 536,991 - -1.0 537,054 + +0.3 537,055 - -0.2 537,055 - -0.8 537,142 + PfGW456L13_468 0.24 -1.3 537,142 + PfGW456L13_468 0.24 -1.8 537,623 - -1.5 537,624 + +1.3 537,624 + +1.8 537,624 + -0.8 537,624 + +1.7 537,625 - +0.2 537,625 - +0.0 537,625 - -3.4 537,625 - -1.3 537,625 - -2.0 537,625 - -2.9 537,625 - -1.8 537,625 - -1.7 537,638 - -0.1 537,675 + +0.4 537,822 - -1.9 537,885 + +2.2 537,903 + +1.4 537,903 + +1.5
Or see this region's nucleotide sequence