Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3079

Experiment: D-Gluconic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Gluconic Acid (C)
3,425,795	-		PfGW456L13_3078	0.52	-0.5
3,425,795	-		PfGW456L13_3078	0.52	+0.2
3,426,011	+		PfGW456L13_3078	0.65	+1.0
3,426,042	+		PfGW456L13_3078	0.66	+1.2
3,426,100	+		PfGW456L13_3078	0.70	+0.7
3,426,100	+		PfGW456L13_3078	0.70	-3.8
3,426,100	+		PfGW456L13_3078	0.70	-0.2
3,426,100	+		PfGW456L13_3078	0.70	+2.5
3,426,100	+		PfGW456L13_3078	0.70	+1.6
3,426,100	+		PfGW456L13_3078	0.70	-0.4
3,426,101	-		PfGW456L13_3078	0.70	+1.8
3,426,101	-		PfGW456L13_3078	0.70	+1.0
3,426,101	-		PfGW456L13_3078	0.70	+3.4
3,426,101	-		PfGW456L13_3078	0.70	+0.8
3,426,101	-		PfGW456L13_3078	0.70	+0.1
3,426,101	-		PfGW456L13_3078	0.70	-0.8
3,426,101	-		PfGW456L13_3078	0.70	-0.5
3,426,101	-		PfGW456L13_3078	0.70	+0.1
3,426,110	-		PfGW456L13_3078	0.70	+1.3
3,426,277	-		PfGW456L13_3078	0.80	+0.8
3,426,667	+				+0.4
3,426,667	+				-2.6
3,426,667	+				+1.1
3,426,667	+				-2.1
3,426,668	-				+0.4
3,426,668	-				+1.4
3,426,702	+				+0.2
3,426,702	+				-0.9
3,426,702	+				+1.5
3,426,703	-				+0.8
3,426,703	-				+0.2
3,426,735	+				-1.8
3,426,735	+				+0.1
3,426,736	-				-0.1
3,426,736	-				+1.4
3,426,736	-				-1.2
3,427,078	+		PfGW456L13_3079	0.32	-0.3
3,427,078	+		PfGW456L13_3079	0.32	-0.9
3,427,079	-		PfGW456L13_3079	0.32	+1.7
3,427,273	+		PfGW456L13_3079	0.46	-1.5
3,427,273	+		PfGW456L13_3079	0.46	+1.5
3,427,273	+		PfGW456L13_3079	0.46	-1.8
3,427,273	+		PfGW456L13_3079	0.46	-0.8
3,427,273	+		PfGW456L13_3079	0.46	-3.5
3,427,273	+		PfGW456L13_3079	0.46	-2.1
3,427,274	-		PfGW456L13_3079	0.46	-0.4
3,427,274	-		PfGW456L13_3079	0.46	+0.0
3,427,306	-		PfGW456L13_3079	0.49	+1.1
3,427,306	-				+1.0
3,427,332	+				-1.2
3,427,332	+		PfGW456L13_3079	0.50	-1.8
3,427,332	+		PfGW456L13_3079	0.50	+1.5
3,427,332	+		PfGW456L13_3079	0.50	-1.2
3,427,333	-		PfGW456L13_3079	0.51	+1.6
3,427,333	-		PfGW456L13_3079	0.51	-1.8
3,427,450	-		PfGW456L13_3079	0.59	-2.2
3,427,462	+		PfGW456L13_3079	0.60	+0.1
3,427,462	+		PfGW456L13_3079	0.60	-0.4
3,427,462	+		PfGW456L13_3079	0.60	+2.9
3,427,462	+		PfGW456L13_3079	0.60	-2.1
3,427,462	+		PfGW456L13_3079	0.60	-0.1
3,427,462	+		PfGW456L13_3079	0.60	-1.8
3,427,462	+		PfGW456L13_3079	0.60	+0.1
3,427,463	-		PfGW456L13_3079	0.60	-4.2
3,427,463	-		PfGW456L13_3079	0.60	-0.7
3,427,463	-		PfGW456L13_3079	0.60	-1.1
3,427,463	-		PfGW456L13_3079	0.60	-3.7
3,427,463	-		PfGW456L13_3079	0.60	+0.7
3,427,463	-		PfGW456L13_3079	0.60	-2.7
3,427,591	+		PfGW456L13_3079	0.70	+1.3
3,427,591	+		PfGW456L13_3079	0.70	-0.1
3,427,592	-		PfGW456L13_3079	0.70	-3.4
3,427,592	-		PfGW456L13_3079	0.70	+0.5
3,427,592	-		PfGW456L13_3079	0.70	+1.9
3,427,592	-		PfGW456L13_3079	0.70	-0.6
3,427,592	-		PfGW456L13_3079	0.70	-1.1
3,427,592	-		PfGW456L13_3079	0.70	+1.8
3,427,724	+		PfGW456L13_3079	0.79	+1.0
3,427,765	+				+0.3
3,427,765	+		PfGW456L13_3079	0.83	+0.1
3,427,765	+		PfGW456L13_3079	0.83	+1.3
3,427,766	-		PfGW456L13_3079	0.83	+1.3
3,427,766	-		PfGW456L13_3079	0.83	+0.9
3,427,827	+		PfGW456L13_3079	0.87	+0.2
3,427,827	+		PfGW456L13_3079	0.87	+0.3
3,427,828	-		PfGW456L13_3079	0.87	+1.7
3,427,828	-		PfGW456L13_3079	0.87	+1.0
3,427,828	-		PfGW456L13_3079	0.87	-0.9
3,427,830	+		PfGW456L13_3079	0.87	-1.4
3,427,830	+		PfGW456L13_3079	0.87	+0.2
3,427,831	-		PfGW456L13_3079	0.87	-0.0
3,427,831	-				-1.8
3,427,831	-		PfGW456L13_3079	0.87	-2.0
3,427,831	-		PfGW456L13_3079	0.87	+0.1
3,427,831	-		PfGW456L13_3079	0.87	-1.2
3,427,831	-		PfGW456L13_3079	0.87	-0.9
3,427,918	+				+1.8
3,427,918	+				-2.9
3,427,919	-				-1.2
3,427,919	-				+1.1
3,427,919	-				+0.0
3,427,947	+				-0.6
3,427,947	+				-0.2
3,427,947	+				-1.4
3,427,947	+				+0.4
3,427,947	+				-1.6
3,427,948	-				+0.7
3,427,948	-				-0.8
3,427,948	-				-0.1
3,427,948	-				+0.5
3,427,998	+				+1.4
3,427,998	+				-0.9
3,427,999	-				-0.3
3,427,999	-				+1.8
3,427,999	-				-0.7
3,427,999	-				+0.9
3,427,999	-				-1.2
3,428,099	+				-2.9
3,428,100	-				-0.3
3,428,100	-				+1.7
3,428,100	-				+0.8
3,428,100	-				+0.6
3,428,100	-				-4.5
3,428,210	+		PfGW456L13_3080	0.14	-3.5
3,428,216	+		PfGW456L13_3080	0.15	-3.0
3,428,217	-		PfGW456L13_3080	0.15	-3.6
3,428,217	-		PfGW456L13_3080	0.15	-1.0
3,428,217	-		PfGW456L13_3080	0.15	-1.8
3,428,217	-		PfGW456L13_3080	0.15	+1.2
3,428,249	+		PfGW456L13_3080	0.17	-2.1
3,428,249	+		PfGW456L13_3080	0.17	-3.1
3,428,250	-		PfGW456L13_3080	0.17	+2.0
3,428,291	+		PfGW456L13_3080	0.20	+1.4
3,428,292	-		PfGW456L13_3080	0.20	-3.2
3,428,292	-		PfGW456L13_3080	0.20	+1.5
3,428,292	-		PfGW456L13_3080	0.20	+1.2
3,428,292	-		PfGW456L13_3080	0.20	-4.0
3,428,292	-		PfGW456L13_3080	0.20	-0.0
3,428,300	+		PfGW456L13_3080	0.21	+0.7
3,428,301	-		PfGW456L13_3080	0.21	+0.5
3,428,301	-		PfGW456L13_3080	0.21	+1.2
3,428,301	-		PfGW456L13_3080	0.21	+1.1
3,428,340	-		PfGW456L13_3080	0.24	-0.2
3,428,349	-		PfGW456L13_3080	0.25	+0.1
3,428,444	+		PfGW456L13_3080	0.32	-0.9
3,428,444	+		PfGW456L13_3080	0.32	-2.7
3,428,589	-		PfGW456L13_3080	0.42	+0.8
3,428,623	+		PfGW456L13_3080	0.45	-1.8
3,428,623	+		PfGW456L13_3080	0.45	-0.4
3,428,623	+		PfGW456L13_3080	0.45	-0.2
3,428,623	+		PfGW456L13_3080	0.45	-0.7
3,428,623	+		PfGW456L13_3080	0.45	-2.5
3,428,623	+		PfGW456L13_3080	0.45	+1.3
3,428,623	+		PfGW456L13_3080	0.45	+0.8
3,428,623	+		PfGW456L13_3080	0.45	+0.1
3,428,624	-		PfGW456L13_3080	0.45	-1.6
3,428,624	-		PfGW456L13_3080	0.45	+1.9
3,428,624	-		PfGW456L13_3080	0.45	-0.8
3,428,744	+		PfGW456L13_3080	0.54	-1.0
3,428,745	-		PfGW456L13_3080	0.54	+0.8
3,428,745	-		PfGW456L13_3080	0.54	-0.3
3,428,745	-		PfGW456L13_3080	0.54	-3.4
3,428,745	-		PfGW456L13_3080	0.54	+0.7
3,428,912	+		PfGW456L13_3080	0.66	+0.8
3,428,912	+		PfGW456L13_3080	0.66	+2.2
3,428,912	+		PfGW456L13_3080	0.66	+0.8
3,428,912	+		PfGW456L13_3080	0.66	-0.4
3,428,912	+		PfGW456L13_3080	0.66	+0.4
3,428,913	-		PfGW456L13_3080	0.66	+1.4
3,428,913	-		PfGW456L13_3080	0.66	-0.9
3,428,966	+		PfGW456L13_3080	0.70	-1.6
3,428,966	+		PfGW456L13_3080	0.70	+0.2