Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2413

Experiment: D-Gluconic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Gluconic Acid (C)
2,675,757	+				-1.7
2,675,757	+				-0.3
2,675,763	+				+1.5
2,675,764	-				+0.9
2,675,764	-				-0.0
2,676,160	+		PfGW456L13_2412	0.55	-0.0
2,676,160	+		PfGW456L13_2412	0.55	-1.8
2,676,160	+		PfGW456L13_2412	0.55	-2.0
2,676,160	+		PfGW456L13_2412	0.55	+0.6
2,676,161	-		PfGW456L13_2412	0.55	-1.3
2,676,331	-		PfGW456L13_2412	0.77	+1.6
2,676,416	+		PfGW456L13_2412	0.88	+0.1
2,676,416	+		PfGW456L13_2412	0.88	+2.1
2,676,416	+		PfGW456L13_2412	0.88	+0.6
2,676,417	-		PfGW456L13_2412	0.88	-1.5
2,676,417	-		PfGW456L13_2412	0.88	+0.4
2,676,417	-		PfGW456L13_2412	0.88	-0.4
2,676,417	-		PfGW456L13_2412	0.88	+0.5
2,676,417	-		PfGW456L13_2412	0.88	-1.4
2,676,417	-		PfGW456L13_2412	0.88	-1.6
2,676,548	-				+0.1
2,676,571	+				+2.4
2,676,571	+				-0.2
2,676,712	+				+0.6
2,676,713	-				-1.5
2,676,713	-				-3.0
2,676,713	-				+1.0
2,676,714	+				+0.5
2,676,714	+				+1.3
2,676,714	+				+1.0
2,676,714	+				+1.2
2,676,714	+				-2.3
2,676,714	+				-2.6
2,676,714	+				-2.6
2,676,714	+				-0.1
2,676,715	-				+1.6
2,676,715	-				-3.1
2,676,715	-				-2.2
2,676,747	-				-0.4
2,676,792	+				+0.4
2,676,792	+				-3.2
2,676,793	-				-0.8
2,676,793	-				+1.6
2,676,831	+				-0.6
2,676,831	+				+0.3
2,676,831	+				-2.8
2,676,832	-				+0.5
2,676,846	+		PfGW456L13_2413	0.11	-1.3
2,676,846	+		PfGW456L13_2413	0.11	-0.6
2,676,847	-		PfGW456L13_2413	0.11	-0.8
2,676,847	-		PfGW456L13_2413	0.11	+0.1
2,676,903	+		PfGW456L13_2413	0.16	-1.3
2,676,903	+		PfGW456L13_2413	0.16	-1.8
2,676,903	+		PfGW456L13_2413	0.16	-2.5
2,676,903	+		PfGW456L13_2413	0.16	-3.3
2,676,903	+		PfGW456L13_2413	0.16	-4.0
2,676,903	+		PfGW456L13_2413	0.16	-3.1
2,676,903	+		PfGW456L13_2413	0.16	-0.2
2,676,903	+		PfGW456L13_2413	0.16	+0.3
2,676,903	+		PfGW456L13_2413	0.16	-0.8
2,676,904	-		PfGW456L13_2413	0.16	-0.7
2,676,904	-		PfGW456L13_2413	0.16	+0.4
2,676,904	-		PfGW456L13_2413	0.16	+1.3
2,676,904	-		PfGW456L13_2413	0.16	+2.3
2,676,904	-		PfGW456L13_2413	0.16	-0.5
2,676,904	-		PfGW456L13_2413	0.16	-0.5
2,677,095	+		PfGW456L13_2413	0.33	+0.5
2,677,125	+		PfGW456L13_2413	0.36	-2.9
2,677,125	+		PfGW456L13_2413	0.36	+2.0
2,677,126	-		PfGW456L13_2413	0.36	-3.6
2,677,126	-		PfGW456L13_2413	0.36	-0.0
2,677,126	-		PfGW456L13_2413	0.36	+0.7
2,677,127	+		PfGW456L13_2413	0.36	-1.8
2,677,127	+		PfGW456L13_2413	0.36	+0.3
2,677,127	+		PfGW456L13_2413	0.36	+0.7
2,677,127	+		PfGW456L13_2413	0.36	-1.8
2,677,127	+		PfGW456L13_2413	0.36	-3.8
2,677,128	-		PfGW456L13_2413	0.36	+0.8
2,677,128	-		PfGW456L13_2413	0.36	+0.2
2,677,128	-		PfGW456L13_2413	0.36	-1.3
2,677,128	-		PfGW456L13_2413	0.36	-2.2
2,677,152	+		PfGW456L13_2413	0.38	+0.4
2,677,152	+		PfGW456L13_2413	0.38	+1.4
2,677,152	+		PfGW456L13_2413	0.38	+0.5
2,677,153	-		PfGW456L13_2413	0.38	-3.8
2,677,153	-		PfGW456L13_2413	0.38	-0.9
2,677,302	+		PfGW456L13_2413	0.52	+1.4
2,677,303	-		PfGW456L13_2413	0.52	-0.8
2,677,303	-		PfGW456L13_2413	0.52	-2.7
2,677,380	+		PfGW456L13_2413	0.59	-0.1
2,677,380	+		PfGW456L13_2413	0.59	+2.0
2,677,407	+		PfGW456L13_2413	0.61	-2.8
2,677,408	-		PfGW456L13_2413	0.61	+1.0
2,677,408	-		PfGW456L13_2413	0.61	-0.6
2,677,518	+		PfGW456L13_2413	0.71	-0.1
2,677,519	-		PfGW456L13_2413	0.71	-1.2
2,677,563	+		PfGW456L13_2413	0.75	-1.3
2,677,563	+		PfGW456L13_2413	0.75	+1.1
2,677,563	+		PfGW456L13_2413	0.75	+0.4
2,677,563	+		PfGW456L13_2413	0.75	+1.3
2,677,563	+		PfGW456L13_2413	0.75	+1.8
2,677,563	+		PfGW456L13_2413	0.75	+1.1
2,677,564	-		PfGW456L13_2413	0.75	+0.7
2,677,564	-		PfGW456L13_2413	0.75	-2.5
2,677,564	-		PfGW456L13_2413	0.75	-3.7
2,677,564	-		PfGW456L13_2413	0.75	-0.7
2,677,615	-		PfGW456L13_2413	0.80	+1.1
2,677,615	-		PfGW456L13_2413	0.80	+0.6
2,677,663	-		PfGW456L13_2413	0.84	-0.4
2,677,728	+				+1.2
2,677,849	+				-3.3
2,677,870	+				-1.6
2,677,870	+				-1.3
2,677,870	+				-0.7
2,677,870	+				-0.4
2,677,871	-				-0.0
2,677,871	-				+1.6
2,677,871	-				+0.6
2,677,874	+				+0.5
2,677,949	+				-0.4
2,677,949	+				-0.5
2,677,949	+				-1.7
2,677,950	-				-3.2
2,677,950	-				-0.2
2,677,950	-				-4.8
2,678,022	+		PfGW456L13_2414	0.10	-0.3
2,678,022	+		PfGW456L13_2414	0.10	-3.5
2,678,023	-		PfGW456L13_2414	0.10	-1.5
2,678,023	-		PfGW456L13_2414	0.10	+0.5
2,678,023	-		PfGW456L13_2414	0.10	-2.7
2,678,023	-		PfGW456L13_2414	0.10	+1.2
2,678,028	+		PfGW456L13_2414	0.11	+0.0
2,678,028	+		PfGW456L13_2414	0.11	-2.8
2,678,028	+		PfGW456L13_2414	0.11	-0.7
2,678,028	+		PfGW456L13_2414	0.11	+0.9
2,678,029	-		PfGW456L13_2414	0.11	-2.3
2,678,029	-		PfGW456L13_2414	0.11	+0.4
2,678,029	-		PfGW456L13_2414	0.11	+1.2
2,678,029	-		PfGW456L13_2414	0.11	+1.2
2,678,029	-		PfGW456L13_2414	0.11	-1.4
2,678,029	-		PfGW456L13_2414	0.11	+1.1
2,678,293	-		PfGW456L13_2414	0.29	-2.6
2,678,295	+		PfGW456L13_2414	0.30	-2.0
2,678,421	+		PfGW456L13_2414	0.38	-2.0
2,678,619	+				-0.6
2,678,619	+		PfGW456L13_2414	0.52	+0.3
2,678,652	+		PfGW456L13_2414	0.55	-0.0
2,678,653	-		PfGW456L13_2414	0.55	-0.6
2,678,721	+		PfGW456L13_2414	0.60	+0.5
2,678,721	+		PfGW456L13_2414	0.60	-0.1
2,678,721	+		PfGW456L13_2414	0.60	+1.6
2,678,721	+		PfGW456L13_2414	0.60	-3.0
2,678,721	+		PfGW456L13_2414	0.60	-1.3
2,678,721	+		PfGW456L13_2414	0.60	+0.9
2,678,721	+		PfGW456L13_2414	0.60	+1.0
2,678,722	-		PfGW456L13_2414	0.60	+1.0
2,678,722	-		PfGW456L13_2414	0.60	+0.2
2,678,722	-		PfGW456L13_2414	0.60	-1.7
2,678,782	-		PfGW456L13_2414	0.64	+0.7
2,678,782	-		PfGW456L13_2414	0.64	+1.4