Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4096

Experiment: m.b. Fusidic 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.003 mg/ml
4,912,801	-		Echvi_4094	0.17	-0.7
4,912,964	+		Echvi_4094	0.71	+0.0
4,912,965	-		Echvi_4094	0.72	+0.0
4,912,965	-		Echvi_4094	0.72	-0.1
4,913,222	-		Echvi_4095	0.27	-0.3
4,913,240	-		Echvi_4095	0.30	-0.2
4,913,259	+		Echvi_4095	0.33	-0.2
4,913,260	-		Echvi_4095	0.33	-1.1
4,913,338	+		Echvi_4095	0.46	-0.1
4,913,506	-		Echvi_4095	0.73	+0.1
4,913,525	+		Echvi_4095	0.76	+0.6
4,913,525	+		Echvi_4095	0.76	+0.1
4,913,525	+		Echvi_4095	0.76	+1.2
4,913,525	+		Echvi_4095	0.76	-0.4
4,913,526	-		Echvi_4095	0.76	+0.4
4,913,526	-		Echvi_4095	0.76	-0.8
4,913,526	-		Echvi_4095	0.76	+0.8
4,913,528	-		Echvi_4095	0.77	-1.8
4,913,528	-		Echvi_4095	0.77	+0.7
4,913,529	+		Echvi_4095	0.77	-0.0
4,913,530	-		Echvi_4095	0.77	-2.2
4,913,629	-				-1.5
4,913,629	-				-0.2
4,913,629	-				+0.4
4,913,652	-				-1.8
4,913,677	+				-0.7
4,913,677	+				-0.7
4,913,678	-				-0.4
4,913,679	+				+0.3
4,913,736	+				-1.2
4,913,736	+				+2.3
4,913,736	+				-0.1
4,913,737	-				-0.3
4,913,738	+				+0.6
4,913,757	+				+0.0
4,913,810	+		Echvi_4096	0.13	-0.4
4,913,846	+		Echvi_4096	0.17	-1.1
4,913,846	+		Echvi_4096	0.17	+0.3
4,913,847	-		Echvi_4096	0.17	+0.6
4,913,849	-		Echvi_4096	0.17	-1.4
4,913,849	-		Echvi_4096	0.17	-1.1
4,913,849	-		Echvi_4096	0.17	-2.0
4,913,945	+		Echvi_4096	0.26	-1.0
4,913,946	-		Echvi_4096	0.26	+0.9
4,913,957	+		Echvi_4096	0.28	+0.1
4,913,957	+		Echvi_4096	0.28	+0.3
4,913,957	+		Echvi_4096	0.28	+0.9
4,913,957	+		Echvi_4096	0.28	-0.6
4,913,984	+		Echvi_4096	0.30	-0.2
4,914,004	-		Echvi_4096	0.32	-2.4
4,914,066	-		Echvi_4096	0.38	+0.1
4,914,066	-		Echvi_4096	0.38	-0.7
4,914,069	-		Echvi_4096	0.39	+1.2
4,914,069	-		Echvi_4096	0.39	-0.7
4,914,105	+				+1.6
4,914,106	-				+0.6
4,914,109	-		Echvi_4096	0.42	+0.9
4,914,154	+		Echvi_4096	0.47	+0.2
4,914,154	+		Echvi_4096	0.47	+0.0
4,914,155	-		Echvi_4096	0.47	-1.1
4,914,189	-		Echvi_4096	0.50	-1.2
4,914,214	+		Echvi_4096	0.53	-1.3
4,914,258	+		Echvi_4096	0.57	-0.6
4,914,280	-		Echvi_4096	0.59	-0.9
4,914,280	-		Echvi_4096	0.59	-0.4
4,914,312	-		Echvi_4096	0.62	-0.4
4,914,342	+		Echvi_4096	0.65	-0.4
4,914,359	+		Echvi_4096	0.67	+0.9
4,914,360	-		Echvi_4096	0.67	-2.0
4,914,365	+		Echvi_4096	0.68	-0.6
4,914,368	+		Echvi_4096	0.68	+0.1
4,914,458	+		Echvi_4096	0.77	-0.1
4,914,458	+		Echvi_4096	0.77	+0.4
4,914,458	+		Echvi_4096	0.77	-0.3
4,914,557	+		Echvi_4096	0.86	-2.6
4,914,559	+		Echvi_4096	0.87	-2.9
4,914,559	+		Echvi_4096	0.87	+1.0
4,914,733	+				+0.1
4,914,733	+				+0.2
4,914,865	+		Echvi_4097	0.28	+0.1
4,914,865	+		Echvi_4097	0.28	+0.8
4,914,866	-		Echvi_4097	0.29	+0.3
4,914,866	-		Echvi_4097	0.29	+1.9
4,914,870	-		Echvi_4097	0.29	-0.1
4,914,936	+		Echvi_4097	0.40	-1.9
4,915,047	+		Echvi_4097	0.57	+0.6
4,915,141	-		Echvi_4097	0.72	-0.6
4,915,150	+		Echvi_4097	0.74	+0.4
4,915,150	+		Echvi_4097	0.74	-0.5
4,915,151	-		Echvi_4097	0.74	-0.3
4,915,170	+		Echvi_4097	0.77	+0.3
4,915,170	+		Echvi_4097	0.77	-1.1
4,915,170	+		Echvi_4097	0.77	+1.3
4,915,171	-		Echvi_4097	0.77	-0.1
4,915,289	-				+0.2
4,915,289	-				-0.1
4,915,292	+				-0.2
4,915,293	-				+0.6
4,915,293	-				-0.6
4,915,293	-				+0.1
4,915,296	-				-1.0
4,915,296	-				-0.6
4,915,304	-				-0.2
4,915,318	+				-0.8
4,915,332	+				-1.0
4,915,419	-		Echvi_4098	0.18	-0.1
4,915,428	+		Echvi_4098	0.19	-0.9
4,915,429	-		Echvi_4098	0.19	+0.0
4,915,429	-		Echvi_4098	0.19	-0.3
4,915,446	+		Echvi_4098	0.22	+0.5
4,915,492	-		Echvi_4098	0.29	-0.5
4,915,649	+		Echvi_4098	0.52	-2.1
4,915,677	+		Echvi_4098	0.57	+1.3
4,915,677	+		Echvi_4098	0.57	-0.4
4,915,677	+		Echvi_4098	0.57	+0.3
4,915,678	-		Echvi_4098	0.57	+0.6
4,915,678	-		Echvi_4098	0.57	-1.5