Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1690

Experiment: m.b. Fusidic 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.003 mg/ml
1,979,456	+				+0.2
1,979,463	+				-0.5
1,979,478	+				-1.5
1,979,478	+				-0.1
1,979,478	+				+0.5
1,979,479	-				-0.0
1,979,479	-				-0.6
1,979,482	+				+0.4
1,979,482	+				-2.6
1,979,483	-				-0.4
1,979,488	+				-0.6
1,979,488	+				-0.5
1,979,488	+				+1.7
1,979,489	-				-1.0
1,979,489	-				-0.9
1,979,489	-				-1.2
1,979,757	-		Echvi_1688	0.34	+0.6
1,979,761	+		Echvi_1688	0.35	-0.2
1,979,762	-		Echvi_1688	0.35	+0.3
1,979,785	-		Echvi_1688	0.37	+0.5
1,979,785	-		Echvi_1688	0.37	+0.6
1,979,851	-		Echvi_1688	0.45	-0.2
1,979,879	+		Echvi_1688	0.48	-1.6
1,979,879	+		Echvi_1688	0.48	-0.3
1,979,986	-		Echvi_1688	0.61	-1.2
1,980,110	+		Echvi_1688	0.75	+0.1
1,980,110	+		Echvi_1688	0.75	+0.0
1,980,116	-		Echvi_1688	0.76	-0.5
1,980,145	+		Echvi_1688	0.80	+2.3
1,980,145	+		Echvi_1688	0.80	+0.5
1,980,209	+		Echvi_1688	0.87	-0.2
1,980,209	+		Echvi_1688	0.87	-0.2
1,980,210	-		Echvi_1688	0.87	-0.6
1,980,210	-		Echvi_1688	0.87	+1.1
1,980,210	-		Echvi_1688	0.87	+0.2
1,980,215	+		Echvi_1688	0.88	-0.3
1,980,256	-				+0.5
1,980,345	+		Echvi_1689	0.31	-0.3
1,980,345	+		Echvi_1689	0.31	+1.1
1,980,396	-		Echvi_1689	0.86	-1.2
1,980,396	-		Echvi_1689	0.86	+1.0
1,980,396	-		Echvi_1689	0.86	-0.5
1,980,402	-				+0.3
1,980,402	-				-0.5
1,980,412	-				-0.4
1,980,412	-				-0.3
1,980,412	-				+1.2
1,980,476	-				-0.6
1,980,518	-				-0.7
1,980,694	+		Echvi_1690	0.27	+0.9
1,980,694	+		Echvi_1690	0.27	+0.4
1,980,715	+		Echvi_1690	0.29	-0.9
1,980,715	+		Echvi_1690	0.29	-0.1
1,980,716	-		Echvi_1690	0.29	-0.6
1,980,746	+		Echvi_1690	0.32	-0.4
1,980,878	-		Echvi_1690	0.45	+1.4
1,980,982	+		Echvi_1690	0.55	+0.1
1,980,983	-		Echvi_1690	0.55	+1.2
1,980,983	-		Echvi_1690	0.55	-0.0
1,981,033	+		Echvi_1690	0.60	+0.1
1,981,068	+		Echvi_1690	0.63	-0.2
1,981,219	+		Echvi_1690	0.78	-0.0
1,981,244	+		Echvi_1690	0.80	-0.3
1,981,270	-		Echvi_1690	0.83	-0.1
1,981,379	+				+1.3
1,981,382	+				+0.9
1,981,383	-				+0.4
1,981,383	-				+0.5
1,981,401	-				+1.7
1,981,479	+				+0.4
1,981,480	-				+0.6
1,981,480	-				+0.5
1,981,480	-				+0.7
1,981,511	-				-0.0
1,981,516	-				-0.9
1,981,516	-				+0.2
1,981,566	+				+0.1
1,981,596	+				+0.4
1,981,597	-				-0.2
1,981,597	-				-0.1
1,981,610	+				+1.2
1,981,611	-				-1.3
1,981,675	+				-0.1
1,981,687	-				-0.1
1,981,695	-				-0.4
1,981,697	+				-0.1
1,981,778	-				+0.4
1,981,801	-		Echvi_1691	0.11	-0.5
1,981,803	+		Echvi_1691	0.11	+0.7
1,981,804	-		Echvi_1691	0.11	+0.6
1,981,813	-		Echvi_1691	0.12	+0.8
1,981,813	-		Echvi_1691	0.12	-1.6
1,981,935	-		Echvi_1691	0.24	-0.2
1,981,935	-		Echvi_1691	0.24	-0.2
1,982,065	+		Echvi_1691	0.36	-0.3
1,982,065	+		Echvi_1691	0.36	+0.5
1,982,065	+		Echvi_1691	0.36	-0.3
1,982,114	+		Echvi_1691	0.41	+1.3
1,982,114	+		Echvi_1691	0.41	-1.0
1,982,115	-		Echvi_1691	0.41	+0.1
1,982,115	-		Echvi_1691	0.41	-0.4
1,982,123	+		Echvi_1691	0.42	-0.6
1,982,124	-		Echvi_1691	0.42	+1.2
1,982,124	-		Echvi_1691	0.42	-1.7
1,982,124	-		Echvi_1691	0.42	+0.8
1,982,145	+		Echvi_1691	0.44	-0.4
1,982,175	+		Echvi_1691	0.47	+0.4
1,982,258	+		Echvi_1691	0.55	+0.2
1,982,260	+		Echvi_1691	0.55	+0.1
1,982,261	-		Echvi_1691	0.55	-0.5
1,982,261	-		Echvi_1691	0.55	+0.8
1,982,316	+		Echvi_1691	0.61	+0.7
1,982,316	+		Echvi_1691	0.61	+0.5
1,982,329	+				+1.0
1,982,330	-		Echvi_1691	0.62	-0.6
1,982,352	+		Echvi_1691	0.64	+0.3
1,982,402	-		Echvi_1691	0.69	-0.3