Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_93

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
107,447	+		PfGW456L13_92	0.88	+3.5
107,584	-				-2.2
107,584	-				+1.0
107,690	+				-2.7
107,691	-				-1.9
107,691	-				+1.8
107,691	-				+2.2
107,724	+				+0.4
107,725	-				+1.5
107,817	+				-2.7
107,818	-				-1.1
107,818	-				-1.6
107,824	+				+2.4
107,996	+				-1.5
107,997	-				+1.5
107,997	-				+0.3
108,026	+				+1.8
108,026	+				-0.0
108,091	+				-0.0
108,091	+				-0.4
108,125	+				+3.6
108,125	+				+2.4
108,126	-				+0.3
108,126	-				-3.2
108,227	+				-3.1
108,259	+				+2.2
108,259	+				+2.0
108,259	+				-0.9
108,259	+				-2.8
108,260	-				+0.6
108,260	-				+1.5
108,260	-				-1.0
108,318	+				+2.0
108,319	-				-2.0
108,322	+				+0.8
108,322	+				+2.0
108,322	+				-1.8
108,322	+				+1.4
108,322	+				+0.9
108,322	+				-0.4
108,322	+				-1.7
108,322	+				+2.1
108,322	+				-2.8
108,322	+				-0.2
108,322	+				+0.7
108,322	+				+0.6
108,322	+				+1.5
108,322	+				-1.2
108,322	+				-1.7
108,322	+				-1.2
108,322	+				+0.2
108,322	+				+0.1
108,322	+				-2.5
108,322	+				+1.7
108,322	+				-1.2
108,322	+				-1.0
108,322	+				-2.6
108,322	+				+1.0
108,322	+				-0.7
108,322	+				+0.1
108,322	+				-0.6
108,322	+				+2.3
108,322	+				-0.4
108,322	+				-0.4
108,322	+				+1.8
108,322	+				-1.4
108,322	+				+1.4
108,322	+				-1.1
108,322	+				+2.6
108,322	+				+1.2
108,322	+				-1.9
108,323	-				+2.0
108,323	-				+1.3
108,323	-				-2.0
108,323	-				+0.3
108,323	-				-1.8
108,323	-				-1.0
108,323	-				-5.0
108,323	-				-2.4
108,323	-				-0.0
108,323	-				-0.2
108,323	-				+0.5
108,323	-				-0.7
108,323	-				-1.7
108,323	-				+1.9
108,323	-				-2.1
108,323	-				-0.3
108,323	-				-0.4
108,323	-				+1.9
108,323	-				+0.4
108,323	-				+0.7
108,323	-				-1.0
108,323	-				+2.5
108,323	-				-0.2
108,323	-				-0.5
108,323	-				+0.7
108,323	-				+0.2
108,323	-				-1.2
108,323	-				+1.3
108,323	-				+2.1
108,323	-				+0.0
108,323	-				-0.7
108,323	-				-1.0
108,323	-				+1.1
108,323	-				+1.0
108,323	-				-0.1
108,323	-				-1.4
108,323	-				+1.0
108,323	-				+2.1
108,323	-				-4.0
108,323	-				-2.7
108,323	-				+0.1
108,323	-				+1.6
108,323	-				-2.9
108,323	-				-2.5
108,323	-				-2.4
108,323	-				-0.3
108,326	+				+0.4
108,326	+				-2.9
108,326	+				+2.0
108,326	+				+1.4
108,326	+				+0.8
108,327	-				-3.9
108,327	-				-2.8
108,327	-				-1.2
108,327	-				-1.7
108,327	-				+1.7
108,327	-				+6.1
108,391	+				+0.4
108,391	+				+0.8
108,391	+				+1.2
108,391	+				+0.7
108,391	+				-1.6
108,391	+				+1.7
108,392	-				+1.5
108,392	-				+0.8
108,392	-				-0.8
108,392	-				-2.2
108,392	-				-3.3
108,392	-				+2.0
108,392	-				-4.7
108,392	-				-0.7
108,394	+				-2.3
108,395	-				+2.1
108,395	-				+0.6
108,395	-				-1.5
108,395	-				-1.8
108,458	+				-1.8
108,458	+				-1.6
108,458	+				-0.8
108,458	+				-2.8
108,458	+				+1.4
108,459	-				-0.3
108,459	-				+1.7
108,459	-				+0.9
108,459	-				+0.9
108,459	-				+1.0
108,459	-				-2.6
108,459	-				+3.2
108,799	+		PfGW456L13_93	0.32	+0.7
108,799	+		PfGW456L13_93	0.32	+2.2
108,799	+		PfGW456L13_93	0.32	-0.8
108,800	-		PfGW456L13_93	0.33	+0.8
108,865	+		PfGW456L13_93	0.38	-0.3
108,866	-		PfGW456L13_93	0.38	-0.4
108,866	-		PfGW456L13_93	0.38	-1.1
108,866	-		PfGW456L13_93	0.38	-1.7
108,866	-		PfGW456L13_93	0.38	-2.9
108,962	+		PfGW456L13_93	0.47	+1.6
108,963	-		PfGW456L13_93	0.47	+0.1
108,963	-		PfGW456L13_93	0.47	+0.8
109,193	+		PfGW456L13_93	0.67	-2.4
109,193	+		PfGW456L13_93	0.67	+2.2
109,193	+		PfGW456L13_93	0.67	+0.2
109,193	+		PfGW456L13_93	0.67	+0.3
109,193	+		PfGW456L13_93	0.67	+1.1
109,193	+		PfGW456L13_93	0.67	-0.3
109,193	+		PfGW456L13_93	0.67	-2.3
109,193	+		PfGW456L13_93	0.67	+1.1
109,193	+		PfGW456L13_93	0.67	+1.4
109,194	-		PfGW456L13_93	0.67	+0.6
109,194	-		PfGW456L13_93	0.67	-2.1
109,194	-		PfGW456L13_93	0.67	-1.2
109,194	-		PfGW456L13_93	0.67	-0.2
109,194	-		PfGW456L13_93	0.67	-0.6
109,194	-		PfGW456L13_93	0.67	-0.1
109,194	-		PfGW456L13_93	0.67	-0.0
109,194	-		PfGW456L13_93	0.67	+1.8
109,431	+		PfGW456L13_93	0.88	+1.1
109,432	-		PfGW456L13_93	0.89	-3.0
109,434	+		PfGW456L13_93	0.89	-3.4
109,434	+		PfGW456L13_93	0.89	+1.2
109,533	+				-3.3
109,534	-				+1.2
109,743	-		PfGW456L13_94	0.53	-1.3
109,817	+		PfGW456L13_94	0.77	+0.7
109,818	-		PfGW456L13_94	0.77	+2.1
109,818	-		PfGW456L13_94	0.77	+1.9
109,818	-		PfGW456L13_94	0.77	+0.6
109,818	-		PfGW456L13_94	0.77	-2.4
109,818	-		PfGW456L13_94	0.77	-0.0
109,887	+				+2.1
109,887	+				+0.9
109,888	-				-1.1
109,888	-				+2.2
109,888	-				+0.3
110,249	+		PfGW456L13_95	0.35	-1.4
110,250	-		PfGW456L13_95	0.35	-1.3
110,250	-		PfGW456L13_95	0.35	-0.5
110,390	+		PfGW456L13_95	0.49	-1.7
110,391	-		PfGW456L13_95	0.49	+1.4
110,398	+		PfGW456L13_95	0.50	+2.8
110,399	-		PfGW456L13_95	0.50	+1.3
110,399	-		PfGW456L13_95	0.50	-1.9
110,399	-		PfGW456L13_95	0.50	+0.8