Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_922

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
1,032,075	+		PfGW456L13_920	0.84	-2.0
1,032,076	-		PfGW456L13_920	0.84	-0.8
1,032,076	-		PfGW456L13_920	0.84	+2.8
1,032,085	+		PfGW456L13_920	0.85	+0.2
1,032,085	+		PfGW456L13_920	0.85	-0.0
1,032,086	-		PfGW456L13_920	0.85	-0.3
1,032,086	-		PfGW456L13_920	0.85	+0.9
1,032,194	+				-0.0
1,032,405	+		PfGW456L13_921	0.17	-0.2
1,032,405	+		PfGW456L13_921	0.17	+0.2
1,032,405	+		PfGW456L13_921	0.17	+2.9
1,032,405	+		PfGW456L13_921	0.17	-2.6
1,032,405	+		PfGW456L13_921	0.17	-2.1
1,032,405	+		PfGW456L13_921	0.17	+1.9
1,032,406	-		PfGW456L13_921	0.17	+0.8
1,032,406	-		PfGW456L13_921	0.17	+1.5
1,032,406	-		PfGW456L13_921	0.17	+1.9
1,032,406	-		PfGW456L13_921	0.17	-2.0
1,032,406	-		PfGW456L13_921	0.17	-1.7
1,032,406	-		PfGW456L13_921	0.17	-0.2
1,032,490	+		PfGW456L13_921	0.28	-1.6
1,032,674	+		PfGW456L13_921	0.52	+1.5
1,032,674	+		PfGW456L13_921	0.52	+1.6
1,032,674	+		PfGW456L13_921	0.52	+0.5
1,032,675	-		PfGW456L13_921	0.52	-1.4
1,032,686	+		PfGW456L13_921	0.53	+1.6
1,032,686	+		PfGW456L13_921	0.53	+2.2
1,032,686	+		PfGW456L13_921	0.53	-2.5
1,032,686	+		PfGW456L13_921	0.53	+2.4
1,032,686	+		PfGW456L13_921	0.53	-0.7
1,032,686	+		PfGW456L13_921	0.53	+1.9
1,032,686	+		PfGW456L13_921	0.53	-0.4
1,032,686	+		PfGW456L13_921	0.53	+3.3
1,032,687	-		PfGW456L13_921	0.53	+1.2
1,032,687	-		PfGW456L13_921	0.53	+0.3
1,032,687	-		PfGW456L13_921	0.53	+2.6
1,032,687	-		PfGW456L13_921	0.53	+1.6
1,032,687	-		PfGW456L13_921	0.53	+0.0
1,032,687	-		PfGW456L13_921	0.53	+1.8
1,032,687	-		PfGW456L13_921	0.53	+1.2
1,032,687	-		PfGW456L13_921	0.53	-0.2
1,032,687	-		PfGW456L13_921	0.53	-1.8
1,032,733	+		PfGW456L13_921	0.59	+1.3
1,032,733	+		PfGW456L13_921	0.59	-0.5
1,032,733	+		PfGW456L13_921	0.59	+2.4
1,032,733	+		PfGW456L13_921	0.59	+1.8
1,032,733	+		PfGW456L13_921	0.59	+0.7
1,032,733	+		PfGW456L13_921	0.59	+1.2
1,032,733	+		PfGW456L13_921	0.59	-3.1
1,032,733	+		PfGW456L13_921	0.59	+2.2
1,032,733	+		PfGW456L13_921	0.59	-1.0
1,032,734	-		PfGW456L13_921	0.59	+0.5
1,032,734	-		PfGW456L13_921	0.59	-0.9
1,032,734	-		PfGW456L13_921	0.59	+1.0
1,032,734	-		PfGW456L13_921	0.59	-1.6
1,032,734	-		PfGW456L13_921	0.59	+1.2
1,032,737	+		PfGW456L13_921	0.60	-2.8
1,032,737	+		PfGW456L13_921	0.60	+0.4
1,032,737	+		PfGW456L13_921	0.60	+1.5
1,032,738	-		PfGW456L13_921	0.60	-1.7
1,032,738	-		PfGW456L13_921	0.60	-3.0
1,032,738	-		PfGW456L13_921	0.60	+2.0
1,032,885	-		PfGW456L13_921	0.79	+0.7
1,032,947	+		PfGW456L13_921	0.87	+0.3
1,033,022	+				+0.3
1,033,022	+				+1.9
1,033,209	+		PfGW456L13_922	0.20	+0.1
1,033,209	+		PfGW456L13_922	0.20	+2.2
1,033,209	+		PfGW456L13_922	0.20	+0.6
1,033,210	-		PfGW456L13_922	0.20	+1.2
1,033,830	+				-1.3
1,033,852	+				+1.3
1,033,893	+				-2.5
1,033,893	+				+0.6
1,033,893	+				+1.1
1,033,894	-				+1.8
1,033,894	-				-2.6
1,033,894	-				+1.6
1,034,101	+				+0.1
1,034,101	+				-0.8
1,034,101	+				-1.9
1,034,101	+				+0.7
1,034,102	-				+1.8
1,034,102	-				+0.9
1,034,102	-				-0.6
1,034,102	-				-0.6
1,034,115	-				+2.1
1,034,218	+				+1.5
1,034,218	+				+0.0
1,034,218	+				+3.3
1,034,218	+				-3.2
1,034,218	+				+0.1
1,034,218	+				+0.9
1,034,219	-				+0.2
1,034,219	-				-1.6
1,034,298	+				-0.9
1,034,299	-				-3.0
1,034,299	-				+0.1
1,034,319	+				+0.4
1,034,319	+				+0.7
1,034,319	+				+0.3
1,034,319	+				-2.0
1,034,319	+				+2.9
1,034,320	-				+0.5
1,034,320	-				-0.8
1,034,331	+				-1.2
1,034,331	+				-3.6
1,034,331	+				-2.5
1,034,331	+				+1.1
1,034,331	+				+2.0
1,034,331	+				+2.1
1,034,331	+				+1.9
1,034,331	+				-1.3
1,034,331	+				+0.5
1,034,331	+				-4.2
1,034,331	+				-3.3
1,034,331	+				-2.9
1,034,331	+				+0.8
1,034,332	-				+0.5
1,034,332	-				-1.8
1,034,332	-				-3.1
1,034,332	-				-3.0
1,034,332	-				-0.0
1,034,332	-				-1.8
1,034,332	-				+0.9
1,034,332	-				-0.7
1,034,332	-				+0.3
1,034,332	-				+1.2
1,034,343	+				-2.7
1,034,343	+				-1.9
1,034,343	+				+0.0
1,034,343	+				-2.2
1,034,343	+				-1.7
1,034,343	+				+1.7
1,034,343	+				+0.5
1,034,343	+				+1.4
1,034,343	+				-3.1
1,034,343	+				-3.1
1,034,343	+				+0.2
1,034,343	+				+0.8
1,034,344	-				-0.1
1,034,344	-				+0.1
1,034,344	-				-2.4
1,034,344	-				-0.5
1,034,344	-				+0.8
1,034,344	-				-0.5
1,034,344	-				+0.9
1,034,344	-				-0.1
1,034,344	-				+2.0
1,034,344	-				-0.9
1,034,344	-				-2.1
1,034,344	-				-0.1
1,034,344	-				+0.5
1,034,344	-				-2.5
1,034,344	-				+0.5
1,034,344	-				+1.2
1,034,344	-				-1.7
1,034,344	-				+1.6
1,034,344	-				-3.4
1,034,344	-				-0.4
1,034,344	-				+0.0
1,034,418	+		PfGW456L13_924	0.19	+1.4
1,034,418	+		PfGW456L13_924	0.19	-0.6
1,034,418	+		PfGW456L13_924	0.19	-0.8
1,034,418	+		PfGW456L13_924	0.19	+3.1
1,034,418	+		PfGW456L13_924	0.19	-1.4
1,034,418	+		PfGW456L13_924	0.19	+0.6
1,034,418	+		PfGW456L13_924	0.19	+2.0
1,034,419	-		PfGW456L13_924	0.19	+1.6
1,034,419	-		PfGW456L13_924	0.19	-2.3
1,034,419	-		PfGW456L13_924	0.19	-3.0
1,034,419	-		PfGW456L13_924	0.19	+1.8
1,034,419	-		PfGW456L13_924	0.19	+0.5
1,034,613	+		PfGW456L13_924	0.50	-0.4
1,034,613	+		PfGW456L13_924	0.50	+1.4
1,034,613	+		PfGW456L13_924	0.50	-3.7
1,034,613	+		PfGW456L13_924	0.50	+1.2
1,034,613	+		PfGW456L13_924	0.50	+2.2
1,034,613	+		PfGW456L13_924	0.50	-1.6
1,034,613	+		PfGW456L13_924	0.50	-0.7
1,034,613	+		PfGW456L13_924	0.50	+0.5
1,034,613	+		PfGW456L13_924	0.50	-1.5
1,034,613	+		PfGW456L13_924	0.50	+1.6
1,034,613	+		PfGW456L13_924	0.50	-3.2
1,034,613	+		PfGW456L13_924	0.50	+0.4
1,034,613	+		PfGW456L13_924	0.50	+0.7
1,034,613	+		PfGW456L13_924	0.50	-2.8
1,034,613	+		PfGW456L13_924	0.50	+1.7
1,034,613	+		PfGW456L13_924	0.50	-0.2
1,034,613	+		PfGW456L13_924	0.50	+0.4
1,034,613	+		PfGW456L13_924	0.50	-2.0
1,034,613	+		PfGW456L13_924	0.50	+0.4
1,034,613	+		PfGW456L13_924	0.50	+1.4
1,034,614	-		PfGW456L13_924	0.50	-3.2
1,034,614	-		PfGW456L13_924	0.50	+0.2
1,034,614	-		PfGW456L13_924	0.50	-0.5
1,034,614	-		PfGW456L13_924	0.50	+0.6
1,034,614	-		PfGW456L13_924	0.50	-2.6
1,034,614	-		PfGW456L13_924	0.50	-2.9
1,034,614	-		PfGW456L13_924	0.50	+2.7
1,034,614	-		PfGW456L13_924	0.50	+1.9
1,034,614	-		PfGW456L13_924	0.50	-1.0
1,034,614	-		PfGW456L13_924	0.50	-1.3
1,034,614	-		PfGW456L13_924	0.50	+2.0
1,034,614	-		PfGW456L13_924	0.50	-1.7
1,034,614	-		PfGW456L13_924	0.50	-0.1
1,034,614	-		PfGW456L13_924	0.50	+0.7
1,034,614	-		PfGW456L13_924	0.50	-3.7
1,034,614	-		PfGW456L13_924	0.50	-1.8
1,034,614	-		PfGW456L13_924	0.50	-0.2
1,034,769	+		PfGW456L13_924	0.75	-1.1
1,034,769	+		PfGW456L13_924	0.75	-2.4
1,034,812	-		PfGW456L13_924	0.81	+2.2
1,034,812	-		PfGW456L13_924	0.81	+1.9