Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_711 and PfGW456L13_712 are separated by 135 nucleotides PfGW456L13_712 and PfGW456L13_713 are separated by 142 nucleotides
PfGW456L13_711 - GTP cyclohydrolase I (EC 3.5.4.16) type 2, at 808,786 to 809,682
_711
PfGW456L13_712 - Glutamine synthetase adenylyltransferase, at 809,818 to 810,195
_712
PfGW456L13_713 - Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family, at 810,338 to 811,543
_713
Position (kb) 809
810
811 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 809.104 kb on - strand, within PfGW456L13_711 at 809.104 kb on - strand, within PfGW456L13_711 at 809.146 kb on + strand at 809.146 kb on + strand, within PfGW456L13_711 at 809.147 kb on - strand, within PfGW456L13_711 at 809.147 kb on - strand, within PfGW456L13_711 at 809.249 kb on + strand, within PfGW456L13_711 at 809.249 kb on + strand, within PfGW456L13_711 at 809.249 kb on + strand, within PfGW456L13_711 at 809.249 kb on + strand, within PfGW456L13_711 at 809.250 kb on - strand, within PfGW456L13_711 at 809.250 kb on - strand, within PfGW456L13_711 at 809.250 kb on - strand, within PfGW456L13_711 at 809.250 kb on - strand, within PfGW456L13_711 at 809.449 kb on + strand, within PfGW456L13_711 at 809.912 kb on + strand, within PfGW456L13_712 at 809.958 kb on + strand, within PfGW456L13_712 at 809.958 kb on + strand, within PfGW456L13_712 at 809.958 kb on + strand, within PfGW456L13_712 at 809.958 kb on + strand, within PfGW456L13_712 at 809.958 kb on + strand, within PfGW456L13_712 at 809.959 kb on - strand, within PfGW456L13_712 at 809.994 kb on - strand, within PfGW456L13_712 at 810.026 kb on + strand, within PfGW456L13_712 at 810.027 kb on - strand, within PfGW456L13_712 at 810.027 kb on - strand, within PfGW456L13_712 at 810.027 kb on - strand, within PfGW456L13_712 at 810.056 kb on + strand, within PfGW456L13_712 at 810.057 kb on - strand, within PfGW456L13_712 at 810.265 kb on + strand at 810.265 kb on + strand at 810.266 kb on - strand at 810.331 kb on + strand at 810.332 kb on - strand at 810.542 kb on - strand, within PfGW456L13_713 at 810.542 kb on - strand, within PfGW456L13_713 at 810.559 kb on + strand, within PfGW456L13_713 at 810.564 kb on + strand, within PfGW456L13_713 at 810.564 kb on + strand, within PfGW456L13_713 at 810.564 kb on + strand, within PfGW456L13_713 at 810.620 kb on + strand, within PfGW456L13_713 at 810.770 kb on + strand, within PfGW456L13_713 at 810.908 kb on + strand, within PfGW456L13_713 at 810.908 kb on + strand, within PfGW456L13_713 at 810.909 kb on - strand, within PfGW456L13_713 at 810.933 kb on + strand, within PfGW456L13_713 at 810.934 kb on - strand, within PfGW456L13_713 at 810.934 kb on - strand, within PfGW456L13_713 at 811.098 kb on - strand, within PfGW456L13_713 at 811.098 kb on - strand, within PfGW456L13_713 at 811.098 kb on - strand, within PfGW456L13_713
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 809,104 - PfGW456L13_711 0.35 -0.4 809,104 - PfGW456L13_711 0.35 -0.4 809,146 + +1.0 809,146 + PfGW456L13_711 0.40 +1.4 809,147 - PfGW456L13_711 0.40 +0.2 809,147 - PfGW456L13_711 0.40 -3.2 809,249 + PfGW456L13_711 0.52 +0.5 809,249 + PfGW456L13_711 0.52 +3.0 809,249 + PfGW456L13_711 0.52 -0.2 809,249 + PfGW456L13_711 0.52 +0.8 809,250 - PfGW456L13_711 0.52 -1.2 809,250 - PfGW456L13_711 0.52 +2.6 809,250 - PfGW456L13_711 0.52 -0.1 809,250 - PfGW456L13_711 0.52 -0.5 809,449 + PfGW456L13_711 0.74 -1.9 809,912 + PfGW456L13_712 0.25 +0.4 809,958 + PfGW456L13_712 0.37 +1.5 809,958 + PfGW456L13_712 0.37 -1.3 809,958 + PfGW456L13_712 0.37 -0.4 809,958 + PfGW456L13_712 0.37 +0.4 809,958 + PfGW456L13_712 0.37 +1.2 809,959 - PfGW456L13_712 0.37 +2.7 809,994 - PfGW456L13_712 0.47 +1.1 810,026 + PfGW456L13_712 0.55 +1.5 810,027 - PfGW456L13_712 0.55 +1.4 810,027 - PfGW456L13_712 0.55 +3.0 810,027 - PfGW456L13_712 0.55 -2.6 810,056 + PfGW456L13_712 0.63 +0.1 810,057 - PfGW456L13_712 0.63 +2.8 810,265 + +0.4 810,265 + -2.1 810,266 - +2.9 810,331 + +1.1 810,332 - +1.9 810,542 - PfGW456L13_713 0.17 +2.6 810,542 - PfGW456L13_713 0.17 +0.7 810,559 + PfGW456L13_713 0.18 -1.5 810,564 + PfGW456L13_713 0.19 +1.3 810,564 + PfGW456L13_713 0.19 -1.9 810,564 + PfGW456L13_713 0.19 +1.3 810,620 + PfGW456L13_713 0.23 -0.1 810,770 + PfGW456L13_713 0.36 -0.2 810,908 + PfGW456L13_713 0.47 -0.9 810,908 + PfGW456L13_713 0.47 -1.3 810,909 - PfGW456L13_713 0.47 +1.9 810,933 + PfGW456L13_713 0.49 -0.8 810,934 - PfGW456L13_713 0.49 +2.9 810,934 - PfGW456L13_713 0.49 -2.7 811,098 - PfGW456L13_713 0.63 -1.2 811,098 - PfGW456L13_713 0.63 -0.8 811,098 - PfGW456L13_713 0.63 +2.5
Or see this region's nucleotide sequence