Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_508 and PfGW456L13_509 are separated by 403 nucleotides PfGW456L13_509 and PfGW456L13_510 are separated by 178 nucleotides PfGW456L13_510 and PfGW456L13_511 are separated by 130 nucleotides PfGW456L13_511 and PfGW456L13_512 are separated by 277 nucleotides
PfGW456L13_508 - Transcriptional regulator, MarR family, at 583,044 to 583,472
_508
PfGW456L13_509 - RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE), at 583,876 to 584,025
_509
PfGW456L13_510 - FIG00960943: hypothetical protein, at 584,204 to 584,449
_510
PfGW456L13_511 - FIG00965470: hypothetical protein, at 584,580 to 585,035
_511
PfGW456L13_512 - Putative membrane-bound ClpP-class protease associated with aq_911, at 585,313 to 585,774
_512
Position (kb) 584
585 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 583.399 kb on + strand, within PfGW456L13_508 at 583.399 kb on + strand, within PfGW456L13_508 at 583.399 kb on + strand, within PfGW456L13_508 at 583.399 kb on + strand, within PfGW456L13_508 at 583.527 kb on + strand at 583.578 kb on + strand at 583.578 kb on + strand at 583.578 kb on + strand at 583.579 kb on - strand at 583.579 kb on - strand at 583.579 kb on - strand at 583.582 kb on + strand at 583.582 kb on + strand at 583.582 kb on + strand at 583.583 kb on - strand at 583.627 kb on + strand at 583.627 kb on + strand at 583.627 kb on + strand at 583.628 kb on - strand at 583.628 kb on - strand at 583.628 kb on - strand at 583.653 kb on + strand at 583.653 kb on + strand at 583.686 kb on + strand at 583.686 kb on + strand at 583.686 kb on + strand at 583.686 kb on + strand at 583.686 kb on + strand at 583.686 kb on + strand at 583.686 kb on + strand at 583.687 kb on - strand at 583.687 kb on - strand at 583.687 kb on - strand at 583.687 kb on - strand at 583.687 kb on - strand at 583.687 kb on - strand at 583.687 kb on - strand at 583.687 kb on - strand at 583.687 kb on - strand at 583.687 kb on - strand at 583.687 kb on - strand at 583.696 kb on + strand at 583.697 kb on - strand at 583.697 kb on - strand at 583.735 kb on + strand at 583.735 kb on + strand at 583.826 kb on + strand at 583.826 kb on + strand at 583.826 kb on + strand at 583.826 kb on + strand at 583.826 kb on + strand at 583.826 kb on + strand at 583.826 kb on + strand at 583.826 kb on + strand at 583.827 kb on - strand at 583.827 kb on - strand at 583.827 kb on - strand at 583.827 kb on - strand at 583.827 kb on - strand at 583.827 kb on - strand at 583.827 kb on - strand at 583.827 kb on - strand at 583.827 kb on - strand at 583.827 kb on - strand at 583.877 kb on + strand at 583.878 kb on - strand at 583.878 kb on - strand at 583.879 kb on + strand at 583.879 kb on + strand at 583.879 kb on + strand at 583.879 kb on + strand at 583.879 kb on + strand at 583.879 kb on + strand at 583.879 kb on + strand at 583.879 kb on + strand at 583.879 kb on + strand at 583.879 kb on + strand at 583.879 kb on + strand at 583.879 kb on + strand at 583.880 kb on - strand at 583.880 kb on - strand at 583.880 kb on - strand at 583.880 kb on - strand at 583.880 kb on - strand at 583.880 kb on - strand at 583.880 kb on - strand at 583.880 kb on - strand at 583.880 kb on - strand at 583.880 kb on - strand at 583.880 kb on - strand at 583.880 kb on - strand at 583.880 kb on - strand at 583.880 kb on - strand at 583.880 kb on - strand at 583.880 kb on - strand at 584.145 kb on + strand at 584.194 kb on + strand at 584.194 kb on + strand at 584.195 kb on - strand at 584.201 kb on + strand at 584.201 kb on + strand at 584.201 kb on + strand at 584.201 kb on + strand at 584.201 kb on + strand at 584.201 kb on + strand at 584.202 kb on - strand at 584.205 kb on + strand at 584.206 kb on - strand at 584.206 kb on - strand at 584.374 kb on + strand, within PfGW456L13_510 at 584.374 kb on + strand, within PfGW456L13_510 at 584.677 kb on + strand, within PfGW456L13_511 at 584.677 kb on + strand at 584.677 kb on + strand, within PfGW456L13_511 at 584.677 kb on + strand, within PfGW456L13_511 at 584.677 kb on + strand, within PfGW456L13_511 at 584.677 kb on + strand, within PfGW456L13_511 at 584.677 kb on + strand, within PfGW456L13_511 at 584.678 kb on - strand, within PfGW456L13_511 at 584.678 kb on - strand, within PfGW456L13_511 at 584.678 kb on - strand, within PfGW456L13_511 at 584.678 kb on - strand, within PfGW456L13_511 at 584.678 kb on - strand, within PfGW456L13_511 at 584.678 kb on - strand, within PfGW456L13_511 at 584.678 kb on - strand, within PfGW456L13_511 at 584.678 kb on - strand, within PfGW456L13_511 at 584.728 kb on + strand, within PfGW456L13_511 at 584.729 kb on - strand, within PfGW456L13_511 at 584.875 kb on + strand, within PfGW456L13_511 at 584.876 kb on - strand, within PfGW456L13_511 at 584.876 kb on - strand, within PfGW456L13_511 at 584.876 kb on - strand, within PfGW456L13_511 at 584.930 kb on + strand, within PfGW456L13_511 at 584.990 kb on - strand at 584.990 kb on - strand at 585.036 kb on - strand at 585.036 kb on - strand at 585.084 kb on + strand at 585.084 kb on + strand at 585.084 kb on + strand at 585.085 kb on - strand at 585.085 kb on - strand at 585.085 kb on - strand at 585.100 kb on + strand at 585.104 kb on - strand at 585.111 kb on + strand at 585.197 kb on + strand at 585.198 kb on - strand at 585.198 kb on - strand at 585.198 kb on - strand at 585.198 kb on - strand at 585.204 kb on + strand at 585.204 kb on + strand at 585.205 kb on - strand at 585.272 kb on + strand at 585.273 kb on - strand at 585.362 kb on + strand, within PfGW456L13_512 at 585.362 kb on + strand, within PfGW456L13_512 at 585.363 kb on - strand, within PfGW456L13_512 at 585.363 kb on - strand, within PfGW456L13_512 at 585.397 kb on + strand, within PfGW456L13_512 at 585.397 kb on + strand, within PfGW456L13_512 at 585.397 kb on + strand, within PfGW456L13_512
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 583,399 + PfGW456L13_508 0.83 -1.7 583,399 + PfGW456L13_508 0.83 +0.1 583,399 + PfGW456L13_508 0.83 -0.4 583,399 + PfGW456L13_508 0.83 -1.4 583,527 + -0.6 583,578 + +3.1 583,578 + +4.6 583,578 + +2.7 583,579 - -3.5 583,579 - -3.1 583,579 - +1.4 583,582 + -2.2 583,582 + -1.8 583,582 + +0.3 583,583 - +2.2 583,627 + +3.1 583,627 + -1.5 583,627 + -2.6 583,628 - +0.3 583,628 - +1.2 583,628 - +2.6 583,653 + -2.5 583,653 + -0.7 583,686 + -1.0 583,686 + +2.1 583,686 + -1.5 583,686 + +0.6 583,686 + -2.2 583,686 + +2.3 583,686 + +1.9 583,687 - -0.2 583,687 - -0.5 583,687 - -1.8 583,687 - +1.5 583,687 - +0.6 583,687 - -2.4 583,687 - -3.2 583,687 - -0.9 583,687 - -1.2 583,687 - +1.9 583,687 - -1.0 583,696 + -0.1 583,697 - -1.8 583,697 - +1.6 583,735 + +2.6 583,735 + -2.2 583,826 + -2.9 583,826 + +0.3 583,826 + -1.1 583,826 + +0.1 583,826 + +2.2 583,826 + +0.5 583,826 + +1.6 583,826 + -0.3 583,827 - +2.0 583,827 - -4.2 583,827 - +0.8 583,827 - -1.0 583,827 - -1.8 583,827 - +0.7 583,827 - -1.5 583,827 - +2.1 583,827 - +0.6 583,827 - +1.8 583,877 + +1.4 583,878 - -2.2 583,878 - +0.4 583,879 + -3.3 583,879 + +0.8 583,879 + -2.3 583,879 + -1.6 583,879 + -0.2 583,879 + -0.9 583,879 + +1.4 583,879 + -0.9 583,879 + +1.1 583,879 + +0.1 583,879 + -0.5 583,879 + +0.9 583,880 - -2.4 583,880 - -1.5 583,880 - -0.6 583,880 - -1.2 583,880 - -0.1 583,880 - +0.2 583,880 - -2.2 583,880 - -1.9 583,880 - -2.5 583,880 - -1.5 583,880 - -0.4 583,880 - +0.7 583,880 - -3.1 583,880 - +1.9 583,880 - -2.1 583,880 - +1.4 584,145 + -1.6 584,194 + -3.2 584,194 + -2.7 584,195 - -3.5 584,201 + -0.4 584,201 + -0.6 584,201 + -1.6 584,201 + -2.9 584,201 + +0.6 584,201 + -1.0 584,202 - +0.7 584,205 + -2.5 584,206 - +0.8 584,206 - -0.7 584,374 + PfGW456L13_510 0.69 +1.3 584,374 + PfGW456L13_510 0.69 +1.2 584,677 + PfGW456L13_511 0.21 +0.7 584,677 + +0.4 584,677 + PfGW456L13_511 0.21 -1.1 584,677 + PfGW456L13_511 0.21 -0.7 584,677 + PfGW456L13_511 0.21 -0.2 584,677 + PfGW456L13_511 0.21 +1.7 584,677 + PfGW456L13_511 0.21 +0.6 584,678 - PfGW456L13_511 0.21 +0.8 584,678 - PfGW456L13_511 0.21 -2.0 584,678 - PfGW456L13_511 0.21 -1.2 584,678 - PfGW456L13_511 0.21 -2.8 584,678 - PfGW456L13_511 0.21 -0.6 584,678 - PfGW456L13_511 0.21 +1.7 584,678 - PfGW456L13_511 0.21 -0.4 584,678 - PfGW456L13_511 0.21 -0.1 584,728 + PfGW456L13_511 0.32 +0.6 584,729 - PfGW456L13_511 0.33 +1.0 584,875 + PfGW456L13_511 0.65 +1.6 584,876 - PfGW456L13_511 0.65 +0.8 584,876 - PfGW456L13_511 0.65 -1.4 584,876 - PfGW456L13_511 0.65 -2.2 584,930 + PfGW456L13_511 0.77 -2.5 584,990 - +1.0 584,990 - +3.1 585,036 - +2.1 585,036 - -3.3 585,084 + -2.6 585,084 + +0.8 585,084 + +0.7 585,085 - -0.6 585,085 - +2.0 585,085 - -1.1 585,100 + -3.1 585,104 - +0.9 585,111 + +0.7 585,197 + +0.8 585,198 - +0.9 585,198 - -2.3 585,198 - +1.7 585,198 - +1.5 585,204 + +0.7 585,204 + +0.9 585,205 - +2.7 585,272 + -0.1 585,273 - +1.2 585,362 + PfGW456L13_512 0.11 -0.1 585,362 + PfGW456L13_512 0.11 -2.2 585,363 - PfGW456L13_512 0.11 -0.3 585,363 - PfGW456L13_512 0.11 -2.1 585,397 + PfGW456L13_512 0.18 -0.6 585,397 + PfGW456L13_512 0.18 +0.5 585,397 + PfGW456L13_512 0.18 -3.3
Or see this region's nucleotide sequence