Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_497 and PfGW456L13_498 are separated by 233 nucleotides PfGW456L13_498 and PfGW456L13_499 are separated by 117 nucleotides PfGW456L13_499 and PfGW456L13_500 are separated by 15 nucleotides PfGW456L13_500 and PfGW456L13_501 are separated by 139 nucleotides
PfGW456L13_497 - hypothetical protein, at 570,397 to 573,048
_497
PfGW456L13_498 - hypothetical protein, at 573,282 to 573,491
_498
PfGW456L13_499 - FIG00954152: hypothetical protein, at 573,609 to 573,890
_499
PfGW456L13_500 - FIG00954152: hypothetical protein, at 573,906 to 574,169
_500
PfGW456L13_501 - Ferredoxin reductase, at 574,309 to 575,838
_501
Position (kb) 573
574 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 572.442 kb on - strand, within PfGW456L13_497 at 572.469 kb on + strand, within PfGW456L13_497 at 572.582 kb on + strand, within PfGW456L13_497 at 572.582 kb on + strand, within PfGW456L13_497 at 572.582 kb on + strand, within PfGW456L13_497 at 572.583 kb on - strand, within PfGW456L13_497 at 572.583 kb on - strand, within PfGW456L13_497 at 572.583 kb on - strand, within PfGW456L13_497 at 572.764 kb on - strand, within PfGW456L13_497 at 572.765 kb on + strand, within PfGW456L13_497 at 572.766 kb on - strand, within PfGW456L13_497 at 572.766 kb on - strand, within PfGW456L13_497 at 572.766 kb on - strand, within PfGW456L13_497 at 572.805 kb on - strand at 572.853 kb on + strand at 572.865 kb on + strand at 572.878 kb on + strand at 572.979 kb on + strand at 572.979 kb on + strand at 572.980 kb on - strand at 573.148 kb on - strand at 573.148 kb on - strand at 573.290 kb on + strand at 573.291 kb on - strand at 573.291 kb on - strand at 573.310 kb on + strand, within PfGW456L13_498 at 573.514 kb on - strand at 573.524 kb on + strand at 573.524 kb on + strand at 573.524 kb on + strand at 573.619 kb on + strand at 573.620 kb on - strand at 573.727 kb on + strand, within PfGW456L13_499 at 573.727 kb on + strand, within PfGW456L13_499 at 573.728 kb on - strand, within PfGW456L13_499 at 573.728 kb on - strand, within PfGW456L13_499 at 573.742 kb on + strand, within PfGW456L13_499 at 573.742 kb on + strand, within PfGW456L13_499 at 573.742 kb on + strand, within PfGW456L13_499 at 573.742 kb on + strand, within PfGW456L13_499 at 573.742 kb on + strand, within PfGW456L13_499 at 573.742 kb on + strand, within PfGW456L13_499 at 573.742 kb on + strand, within PfGW456L13_499 at 573.742 kb on + strand, within PfGW456L13_499 at 573.742 kb on + strand, within PfGW456L13_499 at 573.742 kb on + strand, within PfGW456L13_499 at 573.742 kb on + strand, within PfGW456L13_499 at 573.743 kb on - strand, within PfGW456L13_499 at 573.743 kb on - strand, within PfGW456L13_499 at 573.743 kb on - strand, within PfGW456L13_499 at 573.743 kb on - strand, within PfGW456L13_499 at 573.743 kb on - strand, within PfGW456L13_499 at 573.743 kb on - strand, within PfGW456L13_499 at 573.743 kb on - strand, within PfGW456L13_499 at 573.743 kb on - strand, within PfGW456L13_499 at 573.743 kb on - strand, within PfGW456L13_499 at 573.743 kb on - strand, within PfGW456L13_499 at 573.784 kb on + strand, within PfGW456L13_499 at 573.785 kb on - strand, within PfGW456L13_499 at 573.785 kb on - strand, within PfGW456L13_499 at 573.907 kb on + strand at 573.908 kb on - strand at 573.946 kb on + strand, within PfGW456L13_500 at 573.946 kb on + strand, within PfGW456L13_500 at 573.946 kb on + strand, within PfGW456L13_500 at 573.998 kb on + strand, within PfGW456L13_500 at 573.999 kb on - strand, within PfGW456L13_500 at 574.184 kb on + strand at 574.185 kb on - strand at 574.185 kb on - strand at 574.185 kb on - strand at 574.185 kb on - strand at 574.185 kb on - strand at 574.185 kb on - strand at 574.185 kb on - strand at 574.214 kb on + strand at 574.214 kb on + strand at 574.214 kb on + strand at 574.214 kb on + strand at 574.215 kb on - strand at 574.215 kb on - strand at 574.215 kb on - strand at 574.215 kb on - strand at 574.216 kb on + strand at 574.217 kb on - strand at 574.265 kb on + strand at 574.265 kb on + strand at 574.266 kb on - strand at 574.266 kb on - strand at 574.270 kb on - strand at 574.280 kb on + strand at 574.280 kb on + strand at 574.280 kb on + strand at 574.281 kb on - strand at 574.281 kb on - strand at 574.281 kb on - strand at 574.281 kb on - strand at 574.423 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 572,442 - PfGW456L13_497 0.77 -2.2 572,469 + PfGW456L13_497 0.78 +1.0 572,582 + PfGW456L13_497 0.82 +2.9 572,582 + PfGW456L13_497 0.82 -0.5 572,582 + PfGW456L13_497 0.82 -0.9 572,583 - PfGW456L13_497 0.82 -1.6 572,583 - PfGW456L13_497 0.82 -0.3 572,583 - PfGW456L13_497 0.82 +0.8 572,764 - PfGW456L13_497 0.89 -2.3 572,765 + PfGW456L13_497 0.89 -0.7 572,766 - PfGW456L13_497 0.89 +0.3 572,766 - PfGW456L13_497 0.89 +0.5 572,766 - PfGW456L13_497 0.89 -0.1 572,805 - -2.8 572,853 + +0.9 572,865 + -0.9 572,878 + -1.9 572,979 + -0.2 572,979 + +1.0 572,980 - +0.5 573,148 - -0.2 573,148 - -1.3 573,290 + +1.4 573,291 - -1.4 573,291 - -0.5 573,310 + PfGW456L13_498 0.13 -2.1 573,514 - +2.6 573,524 + -2.5 573,524 + +0.3 573,524 + -2.9 573,619 + -1.7 573,620 - +0.6 573,727 + PfGW456L13_499 0.42 -1.5 573,727 + PfGW456L13_499 0.42 -2.5 573,728 - PfGW456L13_499 0.42 +1.7 573,728 - PfGW456L13_499 0.42 +1.9 573,742 + PfGW456L13_499 0.47 +0.2 573,742 + PfGW456L13_499 0.47 +1.0 573,742 + PfGW456L13_499 0.47 +2.2 573,742 + PfGW456L13_499 0.47 -2.2 573,742 + PfGW456L13_499 0.47 +0.4 573,742 + PfGW456L13_499 0.47 +2.4 573,742 + PfGW456L13_499 0.47 +2.0 573,742 + PfGW456L13_499 0.47 -2.7 573,742 + PfGW456L13_499 0.47 +2.6 573,742 + PfGW456L13_499 0.47 -1.7 573,742 + PfGW456L13_499 0.47 +5.1 573,743 - PfGW456L13_499 0.48 -0.6 573,743 - PfGW456L13_499 0.48 -0.1 573,743 - PfGW456L13_499 0.48 +0.8 573,743 - PfGW456L13_499 0.48 -0.4 573,743 - PfGW456L13_499 0.48 +1.3 573,743 - PfGW456L13_499 0.48 -1.1 573,743 - PfGW456L13_499 0.48 +2.1 573,743 - PfGW456L13_499 0.48 -1.4 573,743 - PfGW456L13_499 0.48 -1.9 573,743 - PfGW456L13_499 0.48 -1.5 573,784 + PfGW456L13_499 0.62 -0.1 573,785 - PfGW456L13_499 0.62 -1.0 573,785 - PfGW456L13_499 0.62 +0.3 573,907 + +1.5 573,908 - -1.3 573,946 + PfGW456L13_500 0.15 +2.9 573,946 + PfGW456L13_500 0.15 +0.4 573,946 + PfGW456L13_500 0.15 -1.0 573,998 + PfGW456L13_500 0.35 -2.4 573,999 - PfGW456L13_500 0.35 -1.2 574,184 + -1.4 574,185 - -2.5 574,185 - +1.6 574,185 - +0.8 574,185 - -1.5 574,185 - +2.1 574,185 - -1.2 574,185 - -0.0 574,214 + -0.8 574,214 + -2.7 574,214 + -0.2 574,214 + -0.0 574,215 - +1.0 574,215 - -1.1 574,215 - +2.4 574,215 - -0.8 574,216 + +1.1 574,217 - -2.7 574,265 + +1.4 574,265 + +1.2 574,266 - -0.7 574,266 - +1.0 574,270 - -3.7 574,280 + +3.5 574,280 + -2.7 574,280 + +0.1 574,281 - +1.5 574,281 - -1.3 574,281 - -0.3 574,281 - +1.7 574,423 + +0.5
Or see this region's nucleotide sequence