Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4203

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
4,713,470	+		PfGW456L13_4201	0.83	-1.1
4,713,470	+		PfGW456L13_4201	0.83	-0.9
4,713,470	+		PfGW456L13_4201	0.83	+0.7
4,713,777	+		PfGW456L13_4202	0.21	+1.5
4,713,777	+		PfGW456L13_4202	0.21	-2.9
4,713,778	-		PfGW456L13_4202	0.21	-1.2
4,713,796	-		PfGW456L13_4202	0.23	+2.1
4,713,924	-		PfGW456L13_4202	0.38	+0.7
4,714,032	+		PfGW456L13_4202	0.51	-2.5
4,714,033	-		PfGW456L13_4202	0.51	+1.2
4,714,033	-		PfGW456L13_4202	0.51	-1.5
4,714,033	-		PfGW456L13_4202	0.51	-1.1
4,714,033	-		PfGW456L13_4202	0.51	-0.5
4,714,059	+		PfGW456L13_4202	0.54	+1.2
4,714,059	+		PfGW456L13_4202	0.54	+0.9
4,714,059	+		PfGW456L13_4202	0.54	-0.8
4,714,059	+		PfGW456L13_4202	0.54	+0.8
4,714,059	+		PfGW456L13_4202	0.54	-1.2
4,714,060	-		PfGW456L13_4202	0.54	-1.9
4,714,060	-		PfGW456L13_4202	0.54	+0.7
4,714,060	-		PfGW456L13_4202	0.54	+2.1
4,714,060	-		PfGW456L13_4202	0.54	-1.4
4,714,060	-		PfGW456L13_4202	0.54	-2.2
4,714,065	+		PfGW456L13_4202	0.55	+1.6
4,714,065	+		PfGW456L13_4202	0.55	-2.7
4,714,065	+		PfGW456L13_4202	0.55	-1.9
4,714,066	-		PfGW456L13_4202	0.55	-0.3
4,714,066	-		PfGW456L13_4202	0.55	-2.2
4,714,066	-		PfGW456L13_4202	0.55	+0.8
4,714,066	-		PfGW456L13_4202	0.55	-0.6
4,714,171	-		PfGW456L13_4202	0.67	+0.4
4,714,254	+		PfGW456L13_4202	0.77	+2.4
4,714,254	+		PfGW456L13_4202	0.77	-3.7
4,714,266	+		PfGW456L13_4202	0.78	-0.1
4,714,267	-		PfGW456L13_4202	0.78	+1.7
4,714,267	-		PfGW456L13_4202	0.78	+0.9
4,714,431	+				+0.7
4,714,431	+				-1.4
4,714,431	+				+0.2
4,714,431	+				+2.3
4,714,432	-				+0.0
4,714,432	-				+1.6
4,714,432	-				-2.3
4,714,432	-				+4.2
4,714,432	-				-1.6
4,714,432	-				-2.8
4,714,432	-				-0.9
4,714,432	-				-3.1
4,714,469	-				-0.9
4,714,469	-				-1.9
4,714,486	+				+0.3
4,714,486	+				+2.6
4,714,486	+				+0.8
4,714,486	+				-1.7
4,714,486	+				-2.3
4,714,486	+				-2.2
4,714,486	+				+2.1
4,714,486	+				-1.7
4,714,487	-				-0.9
4,714,487	-				-0.3
4,714,487	-				-3.9
4,714,487	-				+0.8
4,714,487	-				-1.9
4,714,487	-				+0.2
4,714,487	-				+1.0
4,714,487	-				+2.1
4,714,487	-				+2.6
4,714,487	-				+2.3
4,714,490	+				+0.4
4,714,490	+				-2.9
4,714,490	+				+0.4
4,714,490	+				-2.9
4,714,491	-				+0.8
4,714,491	-				+1.6
4,714,491	-				-1.7
4,714,491	-				+0.2
4,714,491	-				+3.4
4,714,491	-				+2.4
4,714,491	-				-0.4
4,714,534	+		PfGW456L13_4203	0.12	-2.9
4,714,534	+		PfGW456L13_4203	0.12	-2.1
4,714,534	+		PfGW456L13_4203	0.12	+0.5
4,714,534	+		PfGW456L13_4203	0.12	-0.1
4,714,535	-		PfGW456L13_4203	0.12	-0.4
4,714,535	-		PfGW456L13_4203	0.12	+0.3
4,714,535	-		PfGW456L13_4203	0.12	+0.9
4,714,535	-		PfGW456L13_4203	0.12	+1.3
4,714,535	-		PfGW456L13_4203	0.12	+0.1
4,714,535	-		PfGW456L13_4203	0.12	+1.2
4,714,594	+		PfGW456L13_4203	0.20	-0.0
4,714,594	+				+2.0
4,714,594	+		PfGW456L13_4203	0.20	-1.2
4,714,594	+		PfGW456L13_4203	0.20	-2.4
4,714,595	-		PfGW456L13_4203	0.20	+1.6
4,714,595	-		PfGW456L13_4203	0.20	-3.3
4,714,595	-		PfGW456L13_4203	0.20	+0.9
4,714,714	+		PfGW456L13_4203	0.35	-1.9
4,714,715	-		PfGW456L13_4203	0.35	+0.6
4,714,715	-		PfGW456L13_4203	0.35	+0.5
4,714,715	-		PfGW456L13_4203	0.35	+0.1
4,714,810	+		PfGW456L13_4203	0.47	-0.4
4,714,811	-		PfGW456L13_4203	0.47	-1.8
4,714,864	+		PfGW456L13_4203	0.54	+1.0
4,714,864	+		PfGW456L13_4203	0.54	-2.4
4,714,864	+		PfGW456L13_4203	0.54	-2.9
4,714,864	+		PfGW456L13_4203	0.54	-3.9
4,714,864	+		PfGW456L13_4203	0.54	-3.5
4,714,865	-		PfGW456L13_4203	0.54	-2.7
4,714,865	-		PfGW456L13_4203	0.54	-2.3
4,714,865	-		PfGW456L13_4203	0.54	-2.8
4,714,865	-		PfGW456L13_4203	0.54	-4.3
4,714,865	-		PfGW456L13_4203	0.54	-1.4
4,714,865	-		PfGW456L13_4203	0.54	-0.0
4,714,865	-		PfGW456L13_4203	0.54	+0.9
4,714,891	+		PfGW456L13_4203	0.57	-1.0
4,714,891	+		PfGW456L13_4203	0.57	-2.1
4,714,892	-		PfGW456L13_4203	0.57	+2.1
4,714,892	-		PfGW456L13_4203	0.57	-0.7
4,715,113	+		PfGW456L13_4203	0.85	+0.3
4,715,114	-		PfGW456L13_4203	0.85	-2.2
4,715,114	-		PfGW456L13_4203	0.85	+1.6
4,715,170	+				+1.1
4,715,171	-				-1.7
4,715,171	-				-2.8
4,715,171	-				-2.1
4,715,208	+				-3.5
4,715,208	+				-0.9
4,715,208	+				-1.6
4,715,209	-				+0.1
4,715,238	+				+0.1
4,715,238	+				-3.3
4,715,238	+				+2.4
4,715,238	+				-3.6
4,715,238	+				+1.1
4,715,238	+				+0.5
4,715,238	+				+1.0
4,715,238	+				+0.6
4,715,239	-				-0.8
4,715,239	-				-3.0
4,715,239	-				-2.5
4,715,239	-				+1.4
4,715,239	-				-1.0
4,715,239	-				-0.4
4,715,239	-				-3.5
4,715,481	+		PfGW456L13_4204	0.25	-3.4
4,715,481	+		PfGW456L13_4204	0.25	-1.2
4,715,481	+		PfGW456L13_4204	0.25	+1.3
4,715,482	-		PfGW456L13_4204	0.25	-3.0
4,715,482	-		PfGW456L13_4204	0.25	-1.0
4,715,482	-		PfGW456L13_4204	0.25	-2.5
4,715,482	-		PfGW456L13_4204	0.25	-3.1
4,715,482	-		PfGW456L13_4204	0.25	+1.3
4,715,869	+		PfGW456L13_4204	0.64	-0.6
4,715,895	+		PfGW456L13_4204	0.67	-1.7
4,715,895	+		PfGW456L13_4204	0.67	+0.2
4,715,895	+		PfGW456L13_4204	0.67	-0.0
4,715,896	-		PfGW456L13_4204	0.67	+2.0
4,715,896	-		PfGW456L13_4204	0.67	+1.2
4,715,940	+		PfGW456L13_4204	0.72	+1.6
4,715,940	+		PfGW456L13_4204	0.72	+0.1
4,715,940	+		PfGW456L13_4204	0.72	+0.9
4,715,940	+		PfGW456L13_4204	0.72	-0.9
4,715,940	+		PfGW456L13_4204	0.72	+1.6
4,715,940	+		PfGW456L13_4204	0.72	-0.6
4,715,940	+		PfGW456L13_4204	0.72	+0.7
4,715,940	+		PfGW456L13_4204	0.72	+0.8
4,715,940	+		PfGW456L13_4204	0.72	-2.4
4,715,940	+		PfGW456L13_4204	0.72	+0.6
4,715,941	-		PfGW456L13_4204	0.72	-2.1
4,715,941	-		PfGW456L13_4204	0.72	-0.8
4,715,941	-		PfGW456L13_4204	0.72	+3.2
4,715,941	-		PfGW456L13_4204	0.72	+1.9
4,715,941	-		PfGW456L13_4204	0.72	-1.2
4,715,941	-		PfGW456L13_4204	0.72	+1.6
4,716,214	+				-2.7
4,716,215	-				-1.1
4,716,215	-				-0.4