Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3889

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
4,365,770	+		PfGW456L13_3888	0.61	+2.4
4,365,778	+		PfGW456L13_3888	0.62	-1.2
4,365,779	-		PfGW456L13_3888	0.62	+1.2
4,365,779	-		PfGW456L13_3888	0.62	-1.9
4,365,784	+		PfGW456L13_3888	0.62	-1.5
4,365,784	+				-0.8
4,365,785	-		PfGW456L13_3888	0.62	-2.8
4,365,785	-		PfGW456L13_3888	0.62	+0.9
4,365,889	+		PfGW456L13_3888	0.70	-0.5
4,365,889	+		PfGW456L13_3888	0.70	-0.0
4,365,890	-		PfGW456L13_3888	0.70	-1.4
4,365,890	-		PfGW456L13_3888	0.70	-2.7
4,365,890	-		PfGW456L13_3888	0.70	+1.4
4,365,996	-		PfGW456L13_3888	0.77	+1.6
4,366,044	+		PfGW456L13_3888	0.81	-3.0
4,366,060	+		PfGW456L13_3888	0.82	-2.0
4,366,290	-				-2.3
4,366,300	+				-3.2
4,366,301	-				-0.5
4,366,403	-				-1.4
4,366,403	-				-3.7
4,366,403	-				+2.2
4,366,938	-		PfGW456L13_3889	0.51	+2.3
4,367,108	+		PfGW456L13_3889	0.67	-2.2
4,367,108	+		PfGW456L13_3889	0.67	-1.4
4,367,109	-		PfGW456L13_3889	0.67	+0.5
4,367,109	-		PfGW456L13_3889	0.67	-1.6
4,367,109	-		PfGW456L13_3889	0.67	+2.6
4,367,352	+		PfGW456L13_3889	0.89	+0.7
4,367,352	+		PfGW456L13_3889	0.89	-3.0
4,367,352	+		PfGW456L13_3889	0.89	+0.6
4,367,352	+		PfGW456L13_3889	0.89	+0.3
4,367,353	-		PfGW456L13_3889	0.89	-2.3
4,367,353	-		PfGW456L13_3889	0.89	+1.5
4,367,433	+				-0.8
4,367,434	-				+2.4
4,367,434	-				+1.2
4,367,452	-				+1.2
4,367,452	-				-0.6
4,367,466	+				-3.0
4,367,482	+				-1.7
4,367,483	-				+0.9
4,367,504	+				-1.4
4,367,504	+				+1.6
4,367,504	+				-2.5
4,367,504	+				-0.1
4,367,505	-				-1.4
4,367,556	+				-1.4
4,367,571	-				-1.4
4,367,571	-				+1.4
4,367,571	-				+0.3
4,367,584	+				+1.5
4,367,584	+				+1.2
4,367,584	+				-2.5
4,367,584	+				+0.8
4,367,585	-				-2.3
4,367,585	-				-0.6
4,367,615	+				-1.8
4,367,615	+				-3.6
4,367,616	-				-2.9
4,367,616	-				+0.0
4,367,653	+				-1.4
4,367,653	+				+0.7
4,367,674	-				+0.3
4,367,674	-				+2.2
4,367,674	-				+1.5
4,367,674	-				+2.7
4,367,718	+		PfGW456L13_3890	0.20	+2.5
4,367,718	+		PfGW456L13_3890	0.20	-1.4
4,367,719	-		PfGW456L13_3890	0.21	-3.2
4,367,719	-		PfGW456L13_3890	0.21	+0.7
4,367,722	+		PfGW456L13_3890	0.22	-1.4
4,367,722	+		PfGW456L13_3890	0.22	+2.8
4,367,722	+		PfGW456L13_3890	0.22	+1.4
4,367,722	+		PfGW456L13_3890	0.22	+0.6
4,367,722	+		PfGW456L13_3890	0.22	-3.8
4,367,723	-		PfGW456L13_3890	0.23	+2.7
4,367,723	-		PfGW456L13_3890	0.23	+0.3
4,367,723	-		PfGW456L13_3890	0.23	-1.2
4,367,723	-		PfGW456L13_3890	0.23	-3.9
4,367,763	-		PfGW456L13_3890	0.41	+0.5
4,367,786	-		PfGW456L13_3890	0.52	+1.2
4,367,786	-		PfGW456L13_3890	0.52	-1.4
4,367,795	-		PfGW456L13_3890	0.56	+1.0
4,367,825	+		PfGW456L13_3890	0.70	+0.7
4,367,873	+				-0.4
4,367,873	+				-0.1
4,367,873	+				-0.8
4,367,874	-				-1.1
4,367,874	-				-3.1
4,367,887	+				+2.3
4,367,887	+				+0.8
4,367,887	+				-2.8
4,367,887	+				-0.7
4,367,887	+				-0.3
4,367,887	+				-3.3
4,367,887	+				+1.6
4,367,888	-				-1.6
4,367,888	-				-0.4
4,367,888	-				-3.8
4,367,888	-				+1.0
4,367,888	-				-3.2
4,367,888	-				-0.4
4,367,888	-				-2.4
4,367,888	-				-0.1
4,367,888	-				-2.0
4,367,888	-				+2.1
4,367,935	+				+0.1
4,367,936	-				-1.7
4,367,936	-				-0.8
4,367,936	-				-3.2
4,367,960	+				+0.7
4,367,960	+				+0.7
4,367,961	-				+0.5
4,367,961	-				-2.1
4,367,961	-				-1.8
4,367,961	-				+3.0
4,367,967	+				+1.2
4,367,967	+				+0.7
4,367,967	+				-0.8
4,367,967	+				-2.5
4,367,967	+				+1.8
4,367,967	+				+1.3
4,367,967	+				-0.8
4,367,967	+				-0.3
4,367,967	+				+2.1
4,367,967	+				-0.6
4,367,967	+				-3.4
4,367,967	+				-0.2
4,367,967	+				-0.6
4,367,967	+				-0.5
4,367,968	-				-3.1
4,367,968	-				+1.8
4,367,968	-				+3.7
4,367,968	-				-0.8
4,367,968	-				+0.2
4,367,968	-				+0.5
4,367,968	-				-1.2
4,367,990	+				-0.2
4,368,021	+				+1.2
4,368,021	+				-1.0
4,368,021	+				+2.0
4,368,021	+				-1.6
4,368,022	-				-2.6
4,368,022	-				+1.6
4,368,022	-				+2.6
4,368,022	-				+1.6
4,368,022	-				-2.0
4,368,022	-				-1.8
4,368,022	-				-3.1
4,368,024	+				-0.6
4,368,024	+				+2.4
4,368,024	+				-3.3
4,368,025	-				+3.3
4,368,046	+				+1.4
4,368,046	+				+1.4
4,368,077	-				+1.8
4,368,077	-				-3.5
4,368,077	-				-1.8
4,368,117	+				-0.8
4,368,117	+				+2.3
4,368,117	+				+1.2
4,368,164	+				-2.6
4,368,164	+				-1.8
4,368,164	+				+1.0
4,368,165	-				+0.6
4,368,165	-				-2.9
4,368,165	-				-0.9
4,368,165	-				-2.1
4,368,165	-				-1.6
4,368,165	-				-2.2
4,368,165	-				-2.0
4,368,244	+				+0.8
4,368,268	+				+1.7
4,368,268	+				-1.7
4,368,268	+				-0.3
4,368,268	+				+1.3
4,368,268	+				-1.1
4,368,269	-				-0.4
4,368,269	-				+3.1
4,368,269	-				+1.3
4,368,269	-				-2.4
4,368,381	+				-3.2
4,368,382	-				+1.2
4,368,382	-				+0.1
4,368,382	-				-1.5
4,368,382	-				-0.6
4,368,382	-				+0.6
4,368,388	+				+1.8
4,368,389	-				+1.6
4,368,389	-				-1.4
4,368,405	+				-1.8
4,368,405	+				+1.5
4,368,405	+				-2.4
4,368,405	+				-0.7
4,368,406	-				-1.8
4,368,406	-				+2.7
4,368,406	-				+0.8
4,368,406	-				-2.7
4,368,406	-				-0.7
4,368,406	-				+1.2
4,368,468	+				+1.0
4,368,468	+				-2.2