Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3772 and PfGW456L13_3773 are separated by 1 nucleotides PfGW456L13_3773 and PfGW456L13_3774 are separated by 156 nucleotides PfGW456L13_3774 and PfGW456L13_3775 are separated by 595 nucleotides
PfGW456L13_3772 - Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone, at 4,245,736 to 4,246,341
_3772
PfGW456L13_3773 - Copper metallochaperone, bacterial analog of Cox17 protein, at 4,246,343 to 4,246,852
_3773
PfGW456L13_3774 - Organic hydroperoxide resistance protein, at 4,247,009 to 4,247,464
_3774
PfGW456L13_3775 - Putrescine/proton symporter, putrescine/ornithine antiporter PotE, at 4,248,060 to 4,249,445
_3775
Position (kb) 4247
4248 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5
6 at 4246.047 kb on + strand, within PfGW456L13_3772 at 4246.048 kb on - strand, within PfGW456L13_3772 at 4246.099 kb on + strand, within PfGW456L13_3772 at 4246.099 kb on + strand, within PfGW456L13_3772 at 4246.100 kb on - strand, within PfGW456L13_3772 at 4246.100 kb on - strand, within PfGW456L13_3772 at 4246.135 kb on + strand, within PfGW456L13_3772 at 4246.209 kb on + strand at 4246.209 kb on + strand, within PfGW456L13_3772 at 4246.210 kb on - strand, within PfGW456L13_3772 at 4246.213 kb on + strand, within PfGW456L13_3772 at 4246.213 kb on + strand, within PfGW456L13_3772 at 4246.213 kb on + strand, within PfGW456L13_3772 at 4246.213 kb on + strand, within PfGW456L13_3772 at 4246.213 kb on + strand, within PfGW456L13_3772 at 4246.213 kb on + strand, within PfGW456L13_3772 at 4246.213 kb on + strand, within PfGW456L13_3772 at 4246.213 kb on + strand, within PfGW456L13_3772 at 4246.213 kb on + strand, within PfGW456L13_3772 at 4246.213 kb on + strand, within PfGW456L13_3772 at 4246.213 kb on + strand, within PfGW456L13_3772 at 4246.214 kb on - strand, within PfGW456L13_3772 at 4246.214 kb on - strand, within PfGW456L13_3772 at 4246.214 kb on - strand, within PfGW456L13_3772 at 4246.214 kb on - strand, within PfGW456L13_3772 at 4246.214 kb on - strand, within PfGW456L13_3772 at 4246.214 kb on - strand, within PfGW456L13_3772 at 4246.214 kb on - strand, within PfGW456L13_3772 at 4246.214 kb on - strand, within PfGW456L13_3772 at 4246.214 kb on - strand, within PfGW456L13_3772 at 4246.214 kb on - strand, within PfGW456L13_3772 at 4246.214 kb on - strand, within PfGW456L13_3772 at 4246.214 kb on - strand, within PfGW456L13_3772 at 4246.214 kb on - strand, within PfGW456L13_3772 at 4246.214 kb on - strand, within PfGW456L13_3772 at 4246.216 kb on - strand, within PfGW456L13_3772 at 4246.567 kb on - strand, within PfGW456L13_3773 at 4246.567 kb on - strand, within PfGW456L13_3773 at 4246.567 kb on - strand, within PfGW456L13_3773 at 4246.567 kb on - strand, within PfGW456L13_3773 at 4246.567 kb on - strand, within PfGW456L13_3773 at 4246.988 kb on - strand at 4246.988 kb on - strand at 4246.988 kb on - strand at 4247.068 kb on - strand, within PfGW456L13_3774 at 4247.400 kb on + strand at 4247.400 kb on + strand, within PfGW456L13_3774 at 4247.401 kb on - strand, within PfGW456L13_3774 at 4247.448 kb on - strand at 4247.448 kb on - strand at 4247.494 kb on + strand at 4247.494 kb on + strand at 4247.494 kb on + strand at 4247.494 kb on + strand at 4247.494 kb on + strand at 4247.494 kb on + strand at 4247.494 kb on + strand at 4247.495 kb on - strand at 4247.495 kb on - strand at 4247.495 kb on - strand at 4247.495 kb on - strand at 4247.495 kb on - strand at 4247.495 kb on - strand at 4247.495 kb on - strand at 4247.495 kb on - strand at 4247.496 kb on + strand at 4247.496 kb on + strand at 4247.496 kb on + strand at 4247.496 kb on + strand at 4247.497 kb on - strand at 4247.497 kb on - strand at 4247.497 kb on - strand at 4247.497 kb on - strand at 4247.497 kb on - strand at 4247.497 kb on - strand at 4247.544 kb on + strand at 4247.544 kb on + strand at 4247.544 kb on + strand at 4247.544 kb on + strand at 4247.545 kb on - strand at 4247.545 kb on - strand at 4247.545 kb on - strand at 4247.545 kb on - strand at 4247.549 kb on + strand at 4247.550 kb on - strand at 4247.550 kb on - strand at 4247.550 kb on - strand at 4247.550 kb on - strand at 4247.553 kb on + strand at 4247.554 kb on - strand at 4247.585 kb on + strand at 4247.585 kb on + strand at 4247.586 kb on - strand at 4247.586 kb on - strand at 4247.599 kb on + strand at 4247.633 kb on + strand at 4247.633 kb on + strand at 4247.633 kb on + strand at 4247.633 kb on + strand at 4247.634 kb on - strand at 4247.634 kb on - strand at 4247.634 kb on - strand at 4247.647 kb on - strand at 4247.647 kb on - strand at 4247.647 kb on - strand at 4247.691 kb on - strand at 4247.786 kb on + strand at 4247.786 kb on + strand at 4247.786 kb on + strand at 4247.786 kb on + strand at 4247.786 kb on + strand at 4247.787 kb on - strand at 4247.787 kb on - strand at 4247.787 kb on - strand at 4247.787 kb on - strand at 4247.787 kb on - strand at 4247.787 kb on - strand at 4247.787 kb on - strand at 4247.787 kb on - strand at 4247.787 kb on - strand at 4247.787 kb on - strand at 4247.787 kb on - strand at 4247.830 kb on + strand at 4247.845 kb on + strand at 4247.846 kb on - strand at 4247.846 kb on - strand at 4247.889 kb on + strand at 4247.890 kb on - strand at 4247.893 kb on + strand at 4247.991 kb on - strand at 4248.018 kb on + strand at 4248.024 kb on + strand at 4248.024 kb on + strand at 4248.024 kb on + strand at 4248.025 kb on - strand at 4248.025 kb on - strand at 4248.025 kb on - strand at 4248.025 kb on - strand at 4248.025 kb on - strand at 4248.025 kb on - strand at 4248.025 kb on - strand at 4248.044 kb on + strand at 4248.044 kb on + strand at 4248.044 kb on + strand at 4248.044 kb on + strand at 4248.044 kb on + strand at 4248.045 kb on - strand at 4248.045 kb on - strand at 4248.045 kb on - strand at 4248.285 kb on + strand, within PfGW456L13_3775 at 4248.285 kb on + strand, within PfGW456L13_3775 at 4248.285 kb on + strand, within PfGW456L13_3775 at 4248.286 kb on - strand, within PfGW456L13_3775 at 4248.286 kb on - strand, within PfGW456L13_3775 at 4248.305 kb on + strand, within PfGW456L13_3775 at 4248.305 kb on + strand, within PfGW456L13_3775 at 4248.306 kb on - strand, within PfGW456L13_3775 at 4248.306 kb on - strand, within PfGW456L13_3775 at 4248.306 kb on - strand, within PfGW456L13_3775 at 4248.306 kb on - strand, within PfGW456L13_3775 at 4248.306 kb on - strand, within PfGW456L13_3775 at 4248.309 kb on + strand, within PfGW456L13_3775 at 4248.309 kb on + strand, within PfGW456L13_3775 at 4248.309 kb on + strand, within PfGW456L13_3775 at 4248.309 kb on + strand, within PfGW456L13_3775 at 4248.309 kb on + strand, within PfGW456L13_3775 at 4248.309 kb on + strand, within PfGW456L13_3775 at 4248.309 kb on + strand, within PfGW456L13_3775 at 4248.309 kb on + strand, within PfGW456L13_3775 at 4248.309 kb on + strand, within PfGW456L13_3775 at 4248.309 kb on + strand, within PfGW456L13_3775 at 4248.309 kb on + strand, within PfGW456L13_3775 at 4248.310 kb on - strand, within PfGW456L13_3775 at 4248.310 kb on - strand, within PfGW456L13_3775 at 4248.310 kb on - strand, within PfGW456L13_3775 at 4248.310 kb on - strand, within PfGW456L13_3775 at 4248.310 kb on - strand, within PfGW456L13_3775 at 4248.321 kb on + strand, within PfGW456L13_3775 at 4248.321 kb on + strand, within PfGW456L13_3775 at 4248.321 kb on + strand, within PfGW456L13_3775 at 4248.321 kb on + strand, within PfGW456L13_3775 at 4248.321 kb on + strand, within PfGW456L13_3775 at 4248.321 kb on + strand, within PfGW456L13_3775 at 4248.322 kb on - strand, within PfGW456L13_3775 at 4248.322 kb on - strand, within PfGW456L13_3775 at 4248.322 kb on - strand, within PfGW456L13_3775 at 4248.327 kb on + strand, within PfGW456L13_3775 at 4248.327 kb on + strand, within PfGW456L13_3775 at 4248.328 kb on - strand, within PfGW456L13_3775 at 4248.328 kb on - strand, within PfGW456L13_3775 at 4248.328 kb on - strand, within PfGW456L13_3775 at 4248.365 kb on + strand, within PfGW456L13_3775 at 4248.365 kb on + strand, within PfGW456L13_3775 at 4248.366 kb on - strand, within PfGW456L13_3775 at 4248.368 kb on + strand, within PfGW456L13_3775 at 4248.369 kb on - strand, within PfGW456L13_3775 at 4248.369 kb on - strand, within PfGW456L13_3775 at 4248.369 kb on - strand, within PfGW456L13_3775 at 4248.369 kb on - strand, within PfGW456L13_3775 at 4248.369 kb on - strand, within PfGW456L13_3775 at 4248.381 kb on + strand, within PfGW456L13_3775 at 4248.382 kb on - strand, within PfGW456L13_3775 at 4248.382 kb on - strand, within PfGW456L13_3775 at 4248.383 kb on + strand, within PfGW456L13_3775 at 4248.383 kb on + strand, within PfGW456L13_3775 at 4248.383 kb on + strand, within PfGW456L13_3775 at 4248.404 kb on - strand, within PfGW456L13_3775 at 4248.424 kb on + strand, within PfGW456L13_3775 at 4248.425 kb on - strand at 4248.425 kb on - strand, within PfGW456L13_3775 at 4248.425 kb on - strand, within PfGW456L13_3775 at 4248.425 kb on - strand, within PfGW456L13_3775 at 4248.425 kb on - strand, within PfGW456L13_3775 at 4248.425 kb on - strand, within PfGW456L13_3775
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 4,246,047 + PfGW456L13_3772 0.51 -2.9 4,246,048 - PfGW456L13_3772 0.51 +0.2 4,246,099 + PfGW456L13_3772 0.60 +0.4 4,246,099 + PfGW456L13_3772 0.60 +1.7 4,246,100 - PfGW456L13_3772 0.60 +0.4 4,246,100 - PfGW456L13_3772 0.60 +0.3 4,246,135 + PfGW456L13_3772 0.66 -0.6 4,246,209 + -0.8 4,246,209 + PfGW456L13_3772 0.78 +1.8 4,246,210 - PfGW456L13_3772 0.78 -0.0 4,246,213 + PfGW456L13_3772 0.79 -1.5 4,246,213 + PfGW456L13_3772 0.79 -1.4 4,246,213 + PfGW456L13_3772 0.79 -3.7 4,246,213 + PfGW456L13_3772 0.79 -2.0 4,246,213 + PfGW456L13_3772 0.79 -1.0 4,246,213 + PfGW456L13_3772 0.79 +0.2 4,246,213 + PfGW456L13_3772 0.79 -0.8 4,246,213 + PfGW456L13_3772 0.79 +1.2 4,246,213 + PfGW456L13_3772 0.79 -3.0 4,246,213 + PfGW456L13_3772 0.79 -2.3 4,246,213 + PfGW456L13_3772 0.79 +0.6 4,246,214 - PfGW456L13_3772 0.79 +1.9 4,246,214 - PfGW456L13_3772 0.79 -2.5 4,246,214 - PfGW456L13_3772 0.79 +1.3 4,246,214 - PfGW456L13_3772 0.79 -1.1 4,246,214 - PfGW456L13_3772 0.79 +0.3 4,246,214 - PfGW456L13_3772 0.79 -0.8 4,246,214 - PfGW456L13_3772 0.79 -2.8 4,246,214 - PfGW456L13_3772 0.79 -2.0 4,246,214 - PfGW456L13_3772 0.79 +0.1 4,246,214 - PfGW456L13_3772 0.79 +1.6 4,246,214 - PfGW456L13_3772 0.79 +2.3 4,246,214 - PfGW456L13_3772 0.79 +1.7 4,246,214 - PfGW456L13_3772 0.79 +2.0 4,246,214 - PfGW456L13_3772 0.79 +0.2 4,246,216 - PfGW456L13_3772 0.79 -0.5 4,246,567 - PfGW456L13_3773 0.44 -3.2 4,246,567 - PfGW456L13_3773 0.44 -0.9 4,246,567 - PfGW456L13_3773 0.44 +0.1 4,246,567 - PfGW456L13_3773 0.44 +0.8 4,246,567 - PfGW456L13_3773 0.44 -3.5 4,246,988 - -1.3 4,246,988 - -0.1 4,246,988 - -0.2 4,247,068 - PfGW456L13_3774 0.13 -1.6 4,247,400 + +0.6 4,247,400 + PfGW456L13_3774 0.86 +3.5 4,247,401 - PfGW456L13_3774 0.86 +0.8 4,247,448 - -0.0 4,247,448 - -0.1 4,247,494 + -2.2 4,247,494 + +2.6 4,247,494 + -1.3 4,247,494 + +1.7 4,247,494 + +0.3 4,247,494 + -1.3 4,247,494 + +1.5 4,247,495 - -2.7 4,247,495 - -0.4 4,247,495 - -1.4 4,247,495 - -0.8 4,247,495 - +1.5 4,247,495 - +0.3 4,247,495 - -0.0 4,247,495 - +0.8 4,247,496 + -0.5 4,247,496 + -0.2 4,247,496 + +3.1 4,247,496 + -0.8 4,247,497 - -1.6 4,247,497 - -1.8 4,247,497 - +1.2 4,247,497 - +0.8 4,247,497 - +0.4 4,247,497 - -0.2 4,247,544 + -3.2 4,247,544 + -1.6 4,247,544 + +1.0 4,247,544 + -1.6 4,247,545 - +1.9 4,247,545 - -2.8 4,247,545 - +1.4 4,247,545 - -1.7 4,247,549 + +1.7 4,247,550 - -2.0 4,247,550 - -4.0 4,247,550 - +1.5 4,247,550 - +0.8 4,247,553 + +1.3 4,247,554 - -0.0 4,247,585 + +0.3 4,247,585 + +1.9 4,247,586 - +0.2 4,247,586 - +0.2 4,247,599 + -1.3 4,247,633 + +0.0 4,247,633 + +0.9 4,247,633 + +0.7 4,247,633 + +0.1 4,247,634 - -1.6 4,247,634 - -0.4 4,247,634 - +1.5 4,247,647 - +3.0 4,247,647 - -0.1 4,247,647 - +1.2 4,247,691 - -1.0 4,247,786 + -1.4 4,247,786 + +0.2 4,247,786 + +0.9 4,247,786 + -3.2 4,247,786 + -2.6 4,247,787 - +1.8 4,247,787 - +0.9 4,247,787 - -0.6 4,247,787 - +2.2 4,247,787 - -1.3 4,247,787 - -0.1 4,247,787 - -0.3 4,247,787 - +3.5 4,247,787 - -0.3 4,247,787 - -0.8 4,247,787 - +0.4 4,247,830 + +1.1 4,247,845 + -2.3 4,247,846 - -1.6 4,247,846 - +2.0 4,247,889 + -3.2 4,247,890 - +2.0 4,247,893 + +1.2 4,247,991 - +0.2 4,248,018 + +1.0 4,248,024 + +0.2 4,248,024 + -1.2 4,248,024 + -0.6 4,248,025 - -1.4 4,248,025 - +0.2 4,248,025 - +1.5 4,248,025 - -2.1 4,248,025 - +0.4 4,248,025 - -1.9 4,248,025 - -2.9 4,248,044 + -0.4 4,248,044 + -0.0 4,248,044 + +0.7 4,248,044 + -3.5 4,248,044 + +1.5 4,248,045 - +0.6 4,248,045 - +1.4 4,248,045 - -2.5 4,248,285 + PfGW456L13_3775 0.16 -0.1 4,248,285 + PfGW456L13_3775 0.16 +2.2 4,248,285 + PfGW456L13_3775 0.16 +0.7 4,248,286 - PfGW456L13_3775 0.16 -2.6 4,248,286 - PfGW456L13_3775 0.16 +0.7 4,248,305 + PfGW456L13_3775 0.18 -0.1 4,248,305 + PfGW456L13_3775 0.18 +0.2 4,248,306 - PfGW456L13_3775 0.18 -2.7 4,248,306 - PfGW456L13_3775 0.18 -1.8 4,248,306 - PfGW456L13_3775 0.18 -2.5 4,248,306 - PfGW456L13_3775 0.18 -2.9 4,248,306 - PfGW456L13_3775 0.18 -2.1 4,248,309 + PfGW456L13_3775 0.18 +1.8 4,248,309 + PfGW456L13_3775 0.18 +0.7 4,248,309 + PfGW456L13_3775 0.18 -1.8 4,248,309 + PfGW456L13_3775 0.18 +1.6 4,248,309 + PfGW456L13_3775 0.18 -0.0 4,248,309 + PfGW456L13_3775 0.18 +0.5 4,248,309 + PfGW456L13_3775 0.18 +0.2 4,248,309 + PfGW456L13_3775 0.18 -1.0 4,248,309 + PfGW456L13_3775 0.18 +2.8 4,248,309 + PfGW456L13_3775 0.18 -0.2 4,248,309 + PfGW456L13_3775 0.18 +3.6 4,248,310 - PfGW456L13_3775 0.18 +0.1 4,248,310 - PfGW456L13_3775 0.18 -0.8 4,248,310 - PfGW456L13_3775 0.18 +1.0 4,248,310 - PfGW456L13_3775 0.18 +0.8 4,248,310 - PfGW456L13_3775 0.18 +1.4 4,248,321 + PfGW456L13_3775 0.19 +3.0 4,248,321 + PfGW456L13_3775 0.19 -1.4 4,248,321 + PfGW456L13_3775 0.19 +0.4 4,248,321 + PfGW456L13_3775 0.19 -0.3 4,248,321 + PfGW456L13_3775 0.19 +1.0 4,248,321 + PfGW456L13_3775 0.19 +1.0 4,248,322 - PfGW456L13_3775 0.19 -1.7 4,248,322 - PfGW456L13_3775 0.19 +1.7 4,248,322 - PfGW456L13_3775 0.19 -2.6 4,248,327 + PfGW456L13_3775 0.19 -2.4 4,248,327 + PfGW456L13_3775 0.19 +4.6 4,248,328 - PfGW456L13_3775 0.19 -3.0 4,248,328 - PfGW456L13_3775 0.19 -0.4 4,248,328 - PfGW456L13_3775 0.19 -0.7 4,248,365 + PfGW456L13_3775 0.22 +0.4 4,248,365 + PfGW456L13_3775 0.22 -0.7 4,248,366 - PfGW456L13_3775 0.22 +0.7 4,248,368 + PfGW456L13_3775 0.22 +0.3 4,248,369 - PfGW456L13_3775 0.22 -1.5 4,248,369 - PfGW456L13_3775 0.22 -0.7 4,248,369 - PfGW456L13_3775 0.22 +1.0 4,248,369 - PfGW456L13_3775 0.22 +0.6 4,248,369 - PfGW456L13_3775 0.22 -1.8 4,248,381 + PfGW456L13_3775 0.23 -0.6 4,248,382 - PfGW456L13_3775 0.23 -2.0 4,248,382 - PfGW456L13_3775 0.23 -1.7 4,248,383 + PfGW456L13_3775 0.23 -2.5 4,248,383 + PfGW456L13_3775 0.23 -3.0 4,248,383 + PfGW456L13_3775 0.23 +1.3 4,248,404 - PfGW456L13_3775 0.25 +1.8 4,248,424 + PfGW456L13_3775 0.26 -0.8 4,248,425 - +5.8 4,248,425 - PfGW456L13_3775 0.26 +2.6 4,248,425 - PfGW456L13_3775 0.26 -1.6 4,248,425 - PfGW456L13_3775 0.26 +1.2 4,248,425 - PfGW456L13_3775 0.26 -0.9 4,248,425 - PfGW456L13_3775 0.26 +1.7
Or see this region's nucleotide sequence