Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2798 and PfGW456L13_2799 are separated by 60 nucleotides PfGW456L13_2799 and PfGW456L13_2800 are separated by 89 nucleotides PfGW456L13_2800 and PfGW456L13_2801 are separated by 133 nucleotides
PfGW456L13_2798 - Putative TEGT family carrier/transport protein, at 3,103,449 to 3,104,120
_2798
PfGW456L13_2799 - hypothetical protein, at 3,104,181 to 3,104,477
_2799
PfGW456L13_2800 - Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system, at 3,104,567 to 3,105,004
_2800
PfGW456L13_2801 - Permease of the drug/metabolite transporter (DMT) superfamily, at 3,105,138 to 3,106,034
_2801
Position (kb)
3104
3105
3106 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3103.572 kb on + strand, within PfGW456L13_2798 at 3103.572 kb on + strand, within PfGW456L13_2798 at 3103.573 kb on - strand, within PfGW456L13_2798 at 3103.573 kb on - strand, within PfGW456L13_2798 at 3103.573 kb on - strand, within PfGW456L13_2798 at 3103.573 kb on - strand, within PfGW456L13_2798 at 3103.632 kb on + strand, within PfGW456L13_2798 at 3103.632 kb on + strand, within PfGW456L13_2798 at 3103.632 kb on + strand, within PfGW456L13_2798 at 3103.632 kb on + strand, within PfGW456L13_2798 at 3103.633 kb on - strand, within PfGW456L13_2798 at 3103.633 kb on - strand, within PfGW456L13_2798 at 3103.633 kb on - strand, within PfGW456L13_2798 at 3103.633 kb on - strand, within PfGW456L13_2798 at 3103.824 kb on + strand, within PfGW456L13_2798 at 3103.824 kb on + strand, within PfGW456L13_2798 at 3103.824 kb on + strand, within PfGW456L13_2798 at 3103.825 kb on - strand, within PfGW456L13_2798 at 3103.888 kb on + strand, within PfGW456L13_2798 at 3103.888 kb on + strand, within PfGW456L13_2798 at 3103.889 kb on - strand, within PfGW456L13_2798 at 3103.889 kb on - strand, within PfGW456L13_2798 at 3104.024 kb on + strand, within PfGW456L13_2798 at 3104.024 kb on + strand, within PfGW456L13_2798 at 3104.025 kb on - strand, within PfGW456L13_2798 at 3104.028 kb on + strand, within PfGW456L13_2798 at 3104.028 kb on + strand, within PfGW456L13_2798 at 3104.028 kb on + strand, within PfGW456L13_2798 at 3104.028 kb on + strand, within PfGW456L13_2798 at 3104.028 kb on + strand, within PfGW456L13_2798 at 3104.028 kb on + strand, within PfGW456L13_2798 at 3104.028 kb on + strand, within PfGW456L13_2798 at 3104.029 kb on - strand, within PfGW456L13_2798 at 3104.029 kb on - strand, within PfGW456L13_2798 at 3104.029 kb on - strand, within PfGW456L13_2798 at 3104.029 kb on - strand, within PfGW456L13_2798 at 3104.029 kb on - strand, within PfGW456L13_2798 at 3104.029 kb on - strand, within PfGW456L13_2798 at 3104.039 kb on + strand, within PfGW456L13_2798 at 3104.052 kb on + strand, within PfGW456L13_2798 at 3104.052 kb on + strand, within PfGW456L13_2798 at 3104.052 kb on + strand, within PfGW456L13_2798 at 3104.052 kb on + strand, within PfGW456L13_2798 at 3104.052 kb on + strand, within PfGW456L13_2798 at 3104.053 kb on - strand at 3104.053 kb on - strand at 3104.053 kb on - strand at 3104.053 kb on - strand at 3104.053 kb on - strand at 3104.056 kb on + strand at 3104.056 kb on + strand at 3104.057 kb on - strand at 3104.057 kb on - strand at 3104.057 kb on - strand at 3104.064 kb on + strand at 3104.064 kb on + strand at 3104.064 kb on + strand at 3104.064 kb on + strand at 3104.065 kb on - strand at 3104.182 kb on + strand at 3104.182 kb on + strand at 3104.183 kb on - strand at 3104.183 kb on - strand at 3104.183 kb on - strand at 3104.183 kb on - strand at 3104.183 kb on - strand at 3104.183 kb on - strand at 3104.183 kb on - strand at 3104.221 kb on + strand, within PfGW456L13_2799 at 3104.230 kb on + strand, within PfGW456L13_2799 at 3104.231 kb on - strand, within PfGW456L13_2799 at 3104.304 kb on + strand, within PfGW456L13_2799 at 3104.304 kb on + strand at 3104.304 kb on + strand, within PfGW456L13_2799 at 3104.304 kb on + strand, within PfGW456L13_2799 at 3104.304 kb on + strand, within PfGW456L13_2799 at 3104.304 kb on + strand, within PfGW456L13_2799 at 3104.304 kb on + strand, within PfGW456L13_2799 at 3104.304 kb on + strand, within PfGW456L13_2799 at 3104.304 kb on + strand, within PfGW456L13_2799 at 3104.304 kb on + strand, within PfGW456L13_2799 at 3104.304 kb on + strand, within PfGW456L13_2799 at 3104.305 kb on - strand, within PfGW456L13_2799 at 3104.305 kb on - strand, within PfGW456L13_2799 at 3104.305 kb on - strand, within PfGW456L13_2799 at 3104.305 kb on - strand, within PfGW456L13_2799 at 3104.305 kb on - strand, within PfGW456L13_2799 at 3104.305 kb on - strand, within PfGW456L13_2799 at 3104.305 kb on - strand, within PfGW456L13_2799 at 3104.305 kb on - strand, within PfGW456L13_2799 at 3104.305 kb on - strand, within PfGW456L13_2799 at 3104.305 kb on - strand, within PfGW456L13_2799 at 3104.344 kb on + strand, within PfGW456L13_2799 at 3104.357 kb on - strand, within PfGW456L13_2799 at 3104.395 kb on + strand, within PfGW456L13_2799 at 3104.481 kb on - strand at 3104.490 kb on + strand at 3104.490 kb on + strand at 3104.491 kb on - strand at 3104.493 kb on + strand at 3104.493 kb on + strand at 3104.493 kb on + strand at 3104.493 kb on + strand at 3104.493 kb on + strand at 3104.493 kb on + strand at 3104.494 kb on - strand at 3104.494 kb on - strand at 3104.494 kb on - strand at 3104.543 kb on - strand at 3104.543 kb on - strand at 3104.543 kb on - strand at 3104.561 kb on + strand at 3104.562 kb on - strand at 3104.562 kb on - strand at 3104.620 kb on + strand, within PfGW456L13_2800 at 3104.797 kb on + strand, within PfGW456L13_2800 at 3104.854 kb on - strand, within PfGW456L13_2800 at 3105.020 kb on + strand at 3105.111 kb on + strand at 3105.111 kb on + strand at 3105.111 kb on + strand at 3105.112 kb on - strand at 3105.112 kb on - strand at 3105.112 kb on - strand at 3105.154 kb on + strand at 3105.441 kb on + strand, within PfGW456L13_2801 at 3105.441 kb on + strand, within PfGW456L13_2801 at 3105.441 kb on + strand, within PfGW456L13_2801 at 3105.441 kb on + strand, within PfGW456L13_2801 at 3105.441 kb on + strand, within PfGW456L13_2801 at 3105.441 kb on + strand, within PfGW456L13_2801 at 3105.441 kb on + strand, within PfGW456L13_2801 at 3105.441 kb on + strand, within PfGW456L13_2801 at 3105.442 kb on - strand, within PfGW456L13_2801 at 3105.442 kb on - strand, within PfGW456L13_2801 at 3105.797 kb on + strand, within PfGW456L13_2801 at 3105.819 kb on + strand, within PfGW456L13_2801 at 3105.819 kb on + strand, within PfGW456L13_2801 at 3105.819 kb on + strand, within PfGW456L13_2801 at 3105.819 kb on + strand, within PfGW456L13_2801 at 3105.819 kb on + strand, within PfGW456L13_2801 at 3105.819 kb on + strand, within PfGW456L13_2801 at 3105.819 kb on + strand, within PfGW456L13_2801 at 3105.819 kb on + strand, within PfGW456L13_2801 at 3105.819 kb on + strand, within PfGW456L13_2801 at 3105.819 kb on + strand, within PfGW456L13_2801 at 3105.819 kb on + strand, within PfGW456L13_2801 at 3105.819 kb on + strand, within PfGW456L13_2801 at 3105.819 kb on + strand, within PfGW456L13_2801 at 3105.820 kb on - strand, within PfGW456L13_2801 at 3105.820 kb on - strand, within PfGW456L13_2801 at 3105.820 kb on - strand, within PfGW456L13_2801 at 3105.820 kb on - strand, within PfGW456L13_2801 at 3105.820 kb on - strand, within PfGW456L13_2801 at 3105.820 kb on - strand, within PfGW456L13_2801 at 3105.820 kb on - strand, within PfGW456L13_2801 at 3105.820 kb on - strand, within PfGW456L13_2801 at 3105.820 kb on - strand, within PfGW456L13_2801 at 3105.820 kb on - strand, within PfGW456L13_2801 at 3105.820 kb on - strand, within PfGW456L13_2801 at 3105.820 kb on - strand, within PfGW456L13_2801 at 3105.831 kb on + strand, within PfGW456L13_2801 at 3105.832 kb on - strand, within PfGW456L13_2801
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 3,103,572 + PfGW456L13_2798 0.18 +0.2 3,103,572 + PfGW456L13_2798 0.18 +0.9 3,103,573 - PfGW456L13_2798 0.18 -0.8 3,103,573 - PfGW456L13_2798 0.18 +1.0 3,103,573 - PfGW456L13_2798 0.18 -0.9 3,103,573 - PfGW456L13_2798 0.18 -1.4 3,103,632 + PfGW456L13_2798 0.27 -0.4 3,103,632 + PfGW456L13_2798 0.27 -1.8 3,103,632 + PfGW456L13_2798 0.27 +1.2 3,103,632 + PfGW456L13_2798 0.27 -1.1 3,103,633 - PfGW456L13_2798 0.27 -2.8 3,103,633 - PfGW456L13_2798 0.27 -1.4 3,103,633 - PfGW456L13_2798 0.27 -2.2 3,103,633 - PfGW456L13_2798 0.27 -1.3 3,103,824 + PfGW456L13_2798 0.56 +0.8 3,103,824 + PfGW456L13_2798 0.56 -0.3 3,103,824 + PfGW456L13_2798 0.56 +0.2 3,103,825 - PfGW456L13_2798 0.56 -2.8 3,103,888 + PfGW456L13_2798 0.65 +1.4 3,103,888 + PfGW456L13_2798 0.65 +1.2 3,103,889 - PfGW456L13_2798 0.65 -1.3 3,103,889 - PfGW456L13_2798 0.65 -1.6 3,104,024 + PfGW456L13_2798 0.86 -2.1 3,104,024 + PfGW456L13_2798 0.86 +1.7 3,104,025 - PfGW456L13_2798 0.86 +0.2 3,104,028 + PfGW456L13_2798 0.86 -0.4 3,104,028 + PfGW456L13_2798 0.86 -0.1 3,104,028 + PfGW456L13_2798 0.86 +1.6 3,104,028 + PfGW456L13_2798 0.86 +1.6 3,104,028 + PfGW456L13_2798 0.86 -2.6 3,104,028 + PfGW456L13_2798 0.86 -1.3 3,104,028 + PfGW456L13_2798 0.86 -3.5 3,104,029 - PfGW456L13_2798 0.86 -1.1 3,104,029 - PfGW456L13_2798 0.86 +2.3 3,104,029 - PfGW456L13_2798 0.86 +0.4 3,104,029 - PfGW456L13_2798 0.86 -1.5 3,104,029 - PfGW456L13_2798 0.86 +2.4 3,104,029 - PfGW456L13_2798 0.86 -1.8 3,104,039 + PfGW456L13_2798 0.88 +0.1 3,104,052 + PfGW456L13_2798 0.90 +0.3 3,104,052 + PfGW456L13_2798 0.90 +0.5 3,104,052 + PfGW456L13_2798 0.90 +0.2 3,104,052 + PfGW456L13_2798 0.90 +1.9 3,104,052 + PfGW456L13_2798 0.90 -2.4 3,104,053 - -3.4 3,104,053 - -1.3 3,104,053 - -1.9 3,104,053 - +0.6 3,104,053 - +0.6 3,104,056 + -0.3 3,104,056 + -0.8 3,104,057 - +0.7 3,104,057 - +0.0 3,104,057 - +0.4 3,104,064 + -0.1 3,104,064 + -2.1 3,104,064 + -2.9 3,104,064 + +1.0 3,104,065 - +2.8 3,104,182 + +0.6 3,104,182 + +0.4 3,104,183 - +1.6 3,104,183 - -3.0 3,104,183 - +1.0 3,104,183 - -0.8 3,104,183 - -0.5 3,104,183 - -0.5 3,104,183 - +0.1 3,104,221 + PfGW456L13_2799 0.13 +0.2 3,104,230 + PfGW456L13_2799 0.16 +0.1 3,104,231 - PfGW456L13_2799 0.17 +0.1 3,104,304 + PfGW456L13_2799 0.41 -1.5 3,104,304 + +1.9 3,104,304 + PfGW456L13_2799 0.41 -1.3 3,104,304 + PfGW456L13_2799 0.41 -0.3 3,104,304 + PfGW456L13_2799 0.41 -3.1 3,104,304 + PfGW456L13_2799 0.41 -1.2 3,104,304 + PfGW456L13_2799 0.41 -1.6 3,104,304 + PfGW456L13_2799 0.41 +0.3 3,104,304 + PfGW456L13_2799 0.41 -1.7 3,104,304 + PfGW456L13_2799 0.41 -2.8 3,104,304 + PfGW456L13_2799 0.41 +1.5 3,104,305 - PfGW456L13_2799 0.42 +1.9 3,104,305 - PfGW456L13_2799 0.42 -0.2 3,104,305 - PfGW456L13_2799 0.42 +0.5 3,104,305 - PfGW456L13_2799 0.42 -0.1 3,104,305 - PfGW456L13_2799 0.42 -1.8 3,104,305 - PfGW456L13_2799 0.42 -0.6 3,104,305 - PfGW456L13_2799 0.42 -0.9 3,104,305 - PfGW456L13_2799 0.42 +0.6 3,104,305 - PfGW456L13_2799 0.42 -0.3 3,104,305 - PfGW456L13_2799 0.42 -1.0 3,104,344 + PfGW456L13_2799 0.55 -1.9 3,104,357 - PfGW456L13_2799 0.59 +0.3 3,104,395 + PfGW456L13_2799 0.72 -2.3 3,104,481 - +1.3 3,104,490 + +0.2 3,104,490 + +2.7 3,104,491 - -0.3 3,104,493 + +1.7 3,104,493 + -0.8 3,104,493 + +0.3 3,104,493 + -1.1 3,104,493 + -2.2 3,104,493 + -0.9 3,104,494 - +0.9 3,104,494 - -0.9 3,104,494 - -2.7 3,104,543 - +2.0 3,104,543 - -2.9 3,104,543 - -1.5 3,104,561 + -0.6 3,104,562 - -0.6 3,104,562 - +1.1 3,104,620 + PfGW456L13_2800 0.12 -1.6 3,104,797 + PfGW456L13_2800 0.53 -0.6 3,104,854 - PfGW456L13_2800 0.66 -2.8 3,105,020 + -1.2 3,105,111 + +0.3 3,105,111 + +0.4 3,105,111 + +2.4 3,105,112 - +1.7 3,105,112 - -1.1 3,105,112 - -4.0 3,105,154 + -2.4 3,105,441 + PfGW456L13_2801 0.34 -3.1 3,105,441 + PfGW456L13_2801 0.34 +0.2 3,105,441 + PfGW456L13_2801 0.34 +0.4 3,105,441 + PfGW456L13_2801 0.34 -0.8 3,105,441 + PfGW456L13_2801 0.34 +0.2 3,105,441 + PfGW456L13_2801 0.34 -2.3 3,105,441 + PfGW456L13_2801 0.34 -1.1 3,105,441 + PfGW456L13_2801 0.34 +0.6 3,105,442 - PfGW456L13_2801 0.34 +1.6 3,105,442 - PfGW456L13_2801 0.34 +0.5 3,105,797 + PfGW456L13_2801 0.73 -2.6 3,105,819 + PfGW456L13_2801 0.76 -0.3 3,105,819 + PfGW456L13_2801 0.76 +0.4 3,105,819 + PfGW456L13_2801 0.76 -2.3 3,105,819 + PfGW456L13_2801 0.76 -0.5 3,105,819 + PfGW456L13_2801 0.76 +0.8 3,105,819 + PfGW456L13_2801 0.76 +0.0 3,105,819 + PfGW456L13_2801 0.76 -2.5 3,105,819 + PfGW456L13_2801 0.76 +0.2 3,105,819 + PfGW456L13_2801 0.76 +1.1 3,105,819 + PfGW456L13_2801 0.76 -2.3 3,105,819 + PfGW456L13_2801 0.76 +1.9 3,105,819 + PfGW456L13_2801 0.76 +1.4 3,105,819 + PfGW456L13_2801 0.76 +1.2 3,105,820 - PfGW456L13_2801 0.76 +0.8 3,105,820 - PfGW456L13_2801 0.76 +2.1 3,105,820 - PfGW456L13_2801 0.76 +1.9 3,105,820 - PfGW456L13_2801 0.76 +0.1 3,105,820 - PfGW456L13_2801 0.76 -1.2 3,105,820 - PfGW456L13_2801 0.76 +1.6 3,105,820 - PfGW456L13_2801 0.76 +0.5 3,105,820 - PfGW456L13_2801 0.76 +0.8 3,105,820 - PfGW456L13_2801 0.76 +1.5 3,105,820 - PfGW456L13_2801 0.76 +1.7 3,105,820 - PfGW456L13_2801 0.76 +2.5 3,105,820 - PfGW456L13_2801 0.76 -0.6 3,105,831 + PfGW456L13_2801 0.77 +0.4 3,105,832 - PfGW456L13_2801 0.77 +2.1
Or see this region's nucleotide sequence