Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2800

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
3,103,572	+		PfGW456L13_2798	0.18	+0.2
3,103,572	+		PfGW456L13_2798	0.18	+0.9
3,103,573	-		PfGW456L13_2798	0.18	-0.8
3,103,573	-		PfGW456L13_2798	0.18	+1.0
3,103,573	-		PfGW456L13_2798	0.18	-0.9
3,103,573	-		PfGW456L13_2798	0.18	-1.4
3,103,632	+		PfGW456L13_2798	0.27	-0.4
3,103,632	+		PfGW456L13_2798	0.27	-1.8
3,103,632	+		PfGW456L13_2798	0.27	+1.2
3,103,632	+		PfGW456L13_2798	0.27	-1.1
3,103,633	-		PfGW456L13_2798	0.27	-2.8
3,103,633	-		PfGW456L13_2798	0.27	-1.4
3,103,633	-		PfGW456L13_2798	0.27	-2.2
3,103,633	-		PfGW456L13_2798	0.27	-1.3
3,103,824	+		PfGW456L13_2798	0.56	+0.8
3,103,824	+		PfGW456L13_2798	0.56	-0.3
3,103,824	+		PfGW456L13_2798	0.56	+0.2
3,103,825	-		PfGW456L13_2798	0.56	-2.8
3,103,888	+		PfGW456L13_2798	0.65	+1.4
3,103,888	+		PfGW456L13_2798	0.65	+1.2
3,103,889	-		PfGW456L13_2798	0.65	-1.3
3,103,889	-		PfGW456L13_2798	0.65	-1.6
3,104,024	+		PfGW456L13_2798	0.86	-2.1
3,104,024	+		PfGW456L13_2798	0.86	+1.7
3,104,025	-		PfGW456L13_2798	0.86	+0.2
3,104,028	+		PfGW456L13_2798	0.86	-0.4
3,104,028	+		PfGW456L13_2798	0.86	-0.1
3,104,028	+		PfGW456L13_2798	0.86	+1.6
3,104,028	+		PfGW456L13_2798	0.86	+1.6
3,104,028	+		PfGW456L13_2798	0.86	-2.6
3,104,028	+		PfGW456L13_2798	0.86	-1.3
3,104,028	+		PfGW456L13_2798	0.86	-3.5
3,104,029	-		PfGW456L13_2798	0.86	-1.1
3,104,029	-		PfGW456L13_2798	0.86	+2.3
3,104,029	-		PfGW456L13_2798	0.86	+0.4
3,104,029	-		PfGW456L13_2798	0.86	-1.5
3,104,029	-		PfGW456L13_2798	0.86	+2.4
3,104,029	-		PfGW456L13_2798	0.86	-1.8
3,104,039	+		PfGW456L13_2798	0.88	+0.1
3,104,052	+		PfGW456L13_2798	0.90	+0.3
3,104,052	+		PfGW456L13_2798	0.90	+0.5
3,104,052	+		PfGW456L13_2798	0.90	+0.2
3,104,052	+		PfGW456L13_2798	0.90	+1.9
3,104,052	+		PfGW456L13_2798	0.90	-2.4
3,104,053	-				-3.4
3,104,053	-				-1.3
3,104,053	-				-1.9
3,104,053	-				+0.6
3,104,053	-				+0.6
3,104,056	+				-0.3
3,104,056	+				-0.8
3,104,057	-				+0.7
3,104,057	-				+0.0
3,104,057	-				+0.4
3,104,064	+				-0.1
3,104,064	+				-2.1
3,104,064	+				-2.9
3,104,064	+				+1.0
3,104,065	-				+2.8
3,104,182	+				+0.6
3,104,182	+				+0.4
3,104,183	-				+1.6
3,104,183	-				-3.0
3,104,183	-				+1.0
3,104,183	-				-0.8
3,104,183	-				-0.5
3,104,183	-				-0.5
3,104,183	-				+0.1
3,104,221	+		PfGW456L13_2799	0.13	+0.2
3,104,230	+		PfGW456L13_2799	0.16	+0.1
3,104,231	-		PfGW456L13_2799	0.17	+0.1
3,104,304	+		PfGW456L13_2799	0.41	-1.5
3,104,304	+				+1.9
3,104,304	+		PfGW456L13_2799	0.41	-1.3
3,104,304	+		PfGW456L13_2799	0.41	-0.3
3,104,304	+		PfGW456L13_2799	0.41	-3.1
3,104,304	+		PfGW456L13_2799	0.41	-1.2
3,104,304	+		PfGW456L13_2799	0.41	-1.6
3,104,304	+		PfGW456L13_2799	0.41	+0.3
3,104,304	+		PfGW456L13_2799	0.41	-1.7
3,104,304	+		PfGW456L13_2799	0.41	-2.8
3,104,304	+		PfGW456L13_2799	0.41	+1.5
3,104,305	-		PfGW456L13_2799	0.42	+1.9
3,104,305	-		PfGW456L13_2799	0.42	-0.2
3,104,305	-		PfGW456L13_2799	0.42	+0.5
3,104,305	-		PfGW456L13_2799	0.42	-0.1
3,104,305	-		PfGW456L13_2799	0.42	-1.8
3,104,305	-		PfGW456L13_2799	0.42	-0.6
3,104,305	-		PfGW456L13_2799	0.42	-0.9
3,104,305	-		PfGW456L13_2799	0.42	+0.6
3,104,305	-		PfGW456L13_2799	0.42	-0.3
3,104,305	-		PfGW456L13_2799	0.42	-1.0
3,104,344	+		PfGW456L13_2799	0.55	-1.9
3,104,357	-		PfGW456L13_2799	0.59	+0.3
3,104,395	+		PfGW456L13_2799	0.72	-2.3
3,104,481	-				+1.3
3,104,490	+				+0.2
3,104,490	+				+2.7
3,104,491	-				-0.3
3,104,493	+				+1.7
3,104,493	+				-0.8
3,104,493	+				+0.3
3,104,493	+				-1.1
3,104,493	+				-2.2
3,104,493	+				-0.9
3,104,494	-				+0.9
3,104,494	-				-0.9
3,104,494	-				-2.7
3,104,543	-				+2.0
3,104,543	-				-2.9
3,104,543	-				-1.5
3,104,561	+				-0.6
3,104,562	-				-0.6
3,104,562	-				+1.1
3,104,620	+		PfGW456L13_2800	0.12	-1.6
3,104,797	+		PfGW456L13_2800	0.53	-0.6
3,104,854	-		PfGW456L13_2800	0.66	-2.8
3,105,020	+				-1.2
3,105,111	+				+0.3
3,105,111	+				+0.4
3,105,111	+				+2.4
3,105,112	-				+1.7
3,105,112	-				-1.1
3,105,112	-				-4.0
3,105,154	+				-2.4
3,105,441	+		PfGW456L13_2801	0.34	-3.1
3,105,441	+		PfGW456L13_2801	0.34	+0.2
3,105,441	+		PfGW456L13_2801	0.34	+0.4
3,105,441	+		PfGW456L13_2801	0.34	-0.8
3,105,441	+		PfGW456L13_2801	0.34	+0.2
3,105,441	+		PfGW456L13_2801	0.34	-2.3
3,105,441	+		PfGW456L13_2801	0.34	-1.1
3,105,441	+		PfGW456L13_2801	0.34	+0.6
3,105,442	-		PfGW456L13_2801	0.34	+1.6
3,105,442	-		PfGW456L13_2801	0.34	+0.5
3,105,797	+		PfGW456L13_2801	0.73	-2.6
3,105,819	+		PfGW456L13_2801	0.76	-0.3
3,105,819	+		PfGW456L13_2801	0.76	+0.4
3,105,819	+		PfGW456L13_2801	0.76	-2.3
3,105,819	+		PfGW456L13_2801	0.76	-0.5
3,105,819	+		PfGW456L13_2801	0.76	+0.8
3,105,819	+		PfGW456L13_2801	0.76	+0.0
3,105,819	+		PfGW456L13_2801	0.76	-2.5
3,105,819	+		PfGW456L13_2801	0.76	+0.2
3,105,819	+		PfGW456L13_2801	0.76	+1.1
3,105,819	+		PfGW456L13_2801	0.76	-2.3
3,105,819	+		PfGW456L13_2801	0.76	+1.9
3,105,819	+		PfGW456L13_2801	0.76	+1.4
3,105,819	+		PfGW456L13_2801	0.76	+1.2
3,105,820	-		PfGW456L13_2801	0.76	+0.8
3,105,820	-		PfGW456L13_2801	0.76	+2.1
3,105,820	-		PfGW456L13_2801	0.76	+1.9
3,105,820	-		PfGW456L13_2801	0.76	+0.1
3,105,820	-		PfGW456L13_2801	0.76	-1.2
3,105,820	-		PfGW456L13_2801	0.76	+1.6
3,105,820	-		PfGW456L13_2801	0.76	+0.5
3,105,820	-		PfGW456L13_2801	0.76	+0.8
3,105,820	-		PfGW456L13_2801	0.76	+1.5
3,105,820	-		PfGW456L13_2801	0.76	+1.7
3,105,820	-		PfGW456L13_2801	0.76	+2.5
3,105,820	-		PfGW456L13_2801	0.76	-0.6
3,105,831	+		PfGW456L13_2801	0.77	+0.4
3,105,832	-		PfGW456L13_2801	0.77	+2.1