Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_270 and PfGW456L13_271 are separated by 253 nucleotides PfGW456L13_271 and PfGW456L13_272 are separated by 32 nucleotides
PfGW456L13_270 - Uroporphyrinogen III decarboxylase (EC 4.1.1.37), at 313,634 to 314,701
_270
PfGW456L13_271 - Glutamate synthase [NADPH] small chain (EC 1.4.1.13), at 314,955 to 316,373
_271
PfGW456L13_272 - Glutamate synthase [NADPH] large chain (EC 1.4.1.13), at 316,406 to 320,851
_272
Position (kb) 314
315
316
317 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 314.781 kb on - strand at 314.804 kb on - strand at 314.804 kb on - strand at 314.812 kb on + strand at 314.930 kb on + strand at 314.930 kb on + strand at 314.933 kb on + strand at 314.933 kb on + strand at 314.933 kb on + strand at 314.933 kb on + strand at 314.933 kb on + strand at 314.933 kb on + strand at 314.933 kb on + strand at 314.933 kb on + strand at 314.933 kb on + strand at 314.933 kb on + strand at 314.933 kb on + strand at 314.933 kb on + strand at 314.933 kb on + strand at 314.934 kb on - strand at 314.934 kb on - strand at 314.934 kb on - strand at 314.934 kb on - strand at 314.934 kb on - strand at 314.934 kb on - strand at 314.934 kb on - strand at 314.934 kb on - strand at 314.934 kb on - strand at 314.934 kb on - strand at 314.968 kb on + strand at 314.968 kb on + strand at 314.968 kb on + strand at 314.969 kb on - strand at 314.969 kb on - strand at 315.018 kb on + strand at 315.019 kb on - strand at 315.019 kb on - strand at 315.085 kb on + strand at 315.085 kb on + strand at 315.086 kb on - strand at 315.086 kb on - strand at 315.086 kb on - strand at 315.086 kb on - strand at 315.086 kb on - strand at 315.086 kb on - strand at 315.086 kb on - strand at 315.086 kb on - strand at 315.337 kb on + strand, within PfGW456L13_271 at 315.337 kb on + strand, within PfGW456L13_271 at 315.337 kb on + strand, within PfGW456L13_271 at 315.337 kb on + strand, within PfGW456L13_271 at 315.338 kb on - strand, within PfGW456L13_271 at 315.416 kb on - strand, within PfGW456L13_271 at 315.455 kb on + strand, within PfGW456L13_271 at 315.455 kb on + strand, within PfGW456L13_271 at 315.456 kb on - strand, within PfGW456L13_271 at 315.492 kb on + strand, within PfGW456L13_271 at 315.592 kb on + strand, within PfGW456L13_271 at 315.593 kb on - strand, within PfGW456L13_271 at 315.634 kb on + strand, within PfGW456L13_271 at 315.634 kb on + strand, within PfGW456L13_271 at 315.634 kb on + strand, within PfGW456L13_271 at 315.634 kb on + strand, within PfGW456L13_271 at 315.635 kb on - strand, within PfGW456L13_271 at 315.635 kb on - strand, within PfGW456L13_271 at 315.635 kb on - strand, within PfGW456L13_271 at 315.635 kb on - strand, within PfGW456L13_271 at 315.640 kb on + strand, within PfGW456L13_271 at 315.640 kb on + strand, within PfGW456L13_271 at 315.640 kb on + strand, within PfGW456L13_271 at 315.640 kb on + strand, within PfGW456L13_271 at 315.640 kb on + strand, within PfGW456L13_271 at 315.640 kb on + strand, within PfGW456L13_271 at 315.640 kb on + strand, within PfGW456L13_271 at 315.640 kb on + strand, within PfGW456L13_271 at 315.640 kb on + strand, within PfGW456L13_271 at 315.640 kb on + strand, within PfGW456L13_271 at 315.640 kb on + strand, within PfGW456L13_271 at 315.640 kb on + strand, within PfGW456L13_271 at 315.640 kb on + strand, within PfGW456L13_271 at 315.640 kb on + strand, within PfGW456L13_271 at 315.640 kb on + strand, within PfGW456L13_271 at 315.640 kb on + strand, within PfGW456L13_271 at 315.641 kb on - strand, within PfGW456L13_271 at 315.641 kb on - strand, within PfGW456L13_271 at 315.641 kb on - strand, within PfGW456L13_271 at 315.641 kb on - strand, within PfGW456L13_271 at 315.641 kb on - strand, within PfGW456L13_271 at 315.641 kb on - strand, within PfGW456L13_271 at 315.641 kb on - strand, within PfGW456L13_271 at 315.641 kb on - strand, within PfGW456L13_271 at 315.641 kb on - strand, within PfGW456L13_271 at 315.641 kb on - strand, within PfGW456L13_271 at 315.641 kb on - strand, within PfGW456L13_271 at 315.641 kb on - strand, within PfGW456L13_271 at 315.641 kb on - strand, within PfGW456L13_271 at 315.641 kb on - strand, within PfGW456L13_271 at 315.660 kb on + strand, within PfGW456L13_271 at 315.670 kb on + strand, within PfGW456L13_271 at 315.670 kb on + strand, within PfGW456L13_271 at 315.670 kb on + strand, within PfGW456L13_271 at 315.670 kb on + strand, within PfGW456L13_271 at 315.671 kb on - strand, within PfGW456L13_271 at 315.671 kb on - strand, within PfGW456L13_271 at 315.991 kb on + strand, within PfGW456L13_271 at 315.991 kb on + strand, within PfGW456L13_271 at 315.991 kb on + strand, within PfGW456L13_271 at 315.991 kb on + strand, within PfGW456L13_271 at 315.991 kb on + strand, within PfGW456L13_271 at 315.991 kb on + strand, within PfGW456L13_271 at 315.991 kb on + strand, within PfGW456L13_271 at 315.991 kb on + strand, within PfGW456L13_271 at 315.991 kb on + strand, within PfGW456L13_271 at 315.991 kb on + strand, within PfGW456L13_271 at 315.992 kb on - strand, within PfGW456L13_271 at 315.992 kb on - strand, within PfGW456L13_271 at 315.992 kb on - strand, within PfGW456L13_271 at 315.992 kb on - strand, within PfGW456L13_271 at 315.992 kb on - strand, within PfGW456L13_271 at 315.992 kb on - strand, within PfGW456L13_271 at 315.992 kb on - strand, within PfGW456L13_271 at 315.992 kb on - strand, within PfGW456L13_271 at 315.992 kb on - strand, within PfGW456L13_271 at 315.992 kb on - strand, within PfGW456L13_271 at 316.205 kb on - strand, within PfGW456L13_271 at 316.355 kb on + strand at 316.356 kb on - strand at 316.356 kb on - strand at 316.377 kb on - strand at 316.488 kb on + strand at 316.488 kb on + strand at 316.489 kb on - strand at 316.489 kb on - strand at 316.545 kb on + strand at 316.545 kb on + strand at 316.546 kb on - strand at 316.546 kb on - strand at 316.546 kb on - strand at 316.546 kb on - strand at 316.546 kb on - strand at 316.546 kb on - strand at 316.546 kb on - strand at 316.578 kb on + strand at 316.579 kb on - strand at 316.668 kb on + strand at 316.704 kb on + strand at 316.722 kb on - strand at 316.722 kb on - strand at 316.746 kb on + strand at 316.746 kb on + strand at 316.746 kb on + strand at 316.746 kb on + strand at 316.747 kb on - strand at 316.798 kb on + strand at 316.798 kb on + strand at 316.860 kb on + strand, within PfGW456L13_272 at 316.861 kb on - strand, within PfGW456L13_272 at 316.861 kb on - strand, within PfGW456L13_272 at 316.861 kb on - strand, within PfGW456L13_272 at 316.962 kb on + strand, within PfGW456L13_272 at 316.962 kb on + strand, within PfGW456L13_272 at 316.962 kb on + strand, within PfGW456L13_272 at 316.963 kb on - strand, within PfGW456L13_272 at 316.963 kb on - strand, within PfGW456L13_272 at 316.986 kb on + strand, within PfGW456L13_272 at 316.986 kb on + strand, within PfGW456L13_272 at 316.986 kb on + strand, within PfGW456L13_272 at 316.986 kb on + strand, within PfGW456L13_272 at 316.986 kb on + strand, within PfGW456L13_272 at 316.986 kb on + strand, within PfGW456L13_272 at 316.987 kb on - strand, within PfGW456L13_272 at 316.987 kb on - strand, within PfGW456L13_272 at 316.987 kb on - strand, within PfGW456L13_272 at 316.987 kb on - strand, within PfGW456L13_272 at 316.987 kb on - strand, within PfGW456L13_272 at 316.987 kb on - strand, within PfGW456L13_272 at 316.987 kb on - strand, within PfGW456L13_272 at 316.987 kb on - strand, within PfGW456L13_272 at 316.987 kb on - strand, within PfGW456L13_272 at 316.987 kb on - strand, within PfGW456L13_272 at 316.987 kb on - strand, within PfGW456L13_272 at 316.987 kb on - strand, within PfGW456L13_272 at 316.987 kb on - strand, within PfGW456L13_272 at 317.143 kb on + strand, within PfGW456L13_272
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 314,781 - +1.9 314,804 - -1.6 314,804 - +1.1 314,812 + +1.8 314,930 + +2.1 314,930 + +1.1 314,933 + -0.7 314,933 + +1.9 314,933 + +0.4 314,933 + -2.1 314,933 + +3.3 314,933 + +1.3 314,933 + +1.6 314,933 + -3.4 314,933 + -3.4 314,933 + +0.8 314,933 + +1.4 314,933 + -2.1 314,933 + -1.6 314,934 - -0.6 314,934 - +1.7 314,934 - +0.4 314,934 - -3.2 314,934 - -1.9 314,934 - +0.1 314,934 - +0.3 314,934 - -4.3 314,934 - +1.3 314,934 - +1.6 314,968 + -2.8 314,968 + -0.4 314,968 + -1.0 314,969 - -1.7 314,969 - -0.5 315,018 + -1.2 315,019 - -1.6 315,019 - -0.5 315,085 + -2.0 315,085 + -0.5 315,086 - -2.0 315,086 - -1.2 315,086 - -1.1 315,086 - -1.6 315,086 - -0.6 315,086 - -0.9 315,086 - -3.2 315,086 - -1.1 315,337 + PfGW456L13_271 0.27 -2.8 315,337 + PfGW456L13_271 0.27 -2.1 315,337 + PfGW456L13_271 0.27 -0.1 315,337 + PfGW456L13_271 0.27 -1.7 315,338 - PfGW456L13_271 0.27 -1.1 315,416 - PfGW456L13_271 0.32 +0.8 315,455 + PfGW456L13_271 0.35 +0.2 315,455 + PfGW456L13_271 0.35 +2.2 315,456 - PfGW456L13_271 0.35 -2.1 315,492 + PfGW456L13_271 0.38 -2.6 315,592 + PfGW456L13_271 0.45 -1.0 315,593 - PfGW456L13_271 0.45 -1.5 315,634 + PfGW456L13_271 0.48 -3.4 315,634 + PfGW456L13_271 0.48 +1.2 315,634 + PfGW456L13_271 0.48 -3.8 315,634 + PfGW456L13_271 0.48 +0.3 315,635 - PfGW456L13_271 0.48 +1.3 315,635 - PfGW456L13_271 0.48 +0.2 315,635 - PfGW456L13_271 0.48 -1.6 315,635 - PfGW456L13_271 0.48 -2.8 315,640 + PfGW456L13_271 0.48 -2.0 315,640 + PfGW456L13_271 0.48 +0.3 315,640 + PfGW456L13_271 0.48 -1.8 315,640 + PfGW456L13_271 0.48 -0.4 315,640 + PfGW456L13_271 0.48 -1.4 315,640 + PfGW456L13_271 0.48 -1.6 315,640 + PfGW456L13_271 0.48 -1.1 315,640 + PfGW456L13_271 0.48 -0.1 315,640 + PfGW456L13_271 0.48 -3.5 315,640 + PfGW456L13_271 0.48 +0.6 315,640 + PfGW456L13_271 0.48 +1.3 315,640 + PfGW456L13_271 0.48 -0.0 315,640 + PfGW456L13_271 0.48 -2.4 315,640 + PfGW456L13_271 0.48 -1.4 315,640 + PfGW456L13_271 0.48 -4.6 315,640 + PfGW456L13_271 0.48 -2.3 315,641 - PfGW456L13_271 0.48 -2.0 315,641 - PfGW456L13_271 0.48 -2.9 315,641 - PfGW456L13_271 0.48 -0.5 315,641 - PfGW456L13_271 0.48 -1.5 315,641 - PfGW456L13_271 0.48 -3.0 315,641 - PfGW456L13_271 0.48 +0.5 315,641 - PfGW456L13_271 0.48 -1.6 315,641 - PfGW456L13_271 0.48 -2.0 315,641 - PfGW456L13_271 0.48 -1.1 315,641 - PfGW456L13_271 0.48 -2.1 315,641 - PfGW456L13_271 0.48 -1.4 315,641 - PfGW456L13_271 0.48 +0.5 315,641 - PfGW456L13_271 0.48 -2.1 315,641 - PfGW456L13_271 0.48 -0.6 315,660 + PfGW456L13_271 0.50 -2.2 315,670 + PfGW456L13_271 0.50 -1.9 315,670 + PfGW456L13_271 0.50 -0.6 315,670 + PfGW456L13_271 0.50 -0.1 315,670 + PfGW456L13_271 0.50 -0.1 315,671 - PfGW456L13_271 0.50 -3.0 315,671 - PfGW456L13_271 0.50 -0.9 315,991 + PfGW456L13_271 0.73 -2.0 315,991 + PfGW456L13_271 0.73 -0.4 315,991 + PfGW456L13_271 0.73 -2.3 315,991 + PfGW456L13_271 0.73 -3.4 315,991 + PfGW456L13_271 0.73 -1.7 315,991 + PfGW456L13_271 0.73 -2.4 315,991 + PfGW456L13_271 0.73 -1.2 315,991 + PfGW456L13_271 0.73 +1.3 315,991 + PfGW456L13_271 0.73 -2.9 315,991 + PfGW456L13_271 0.73 -1.2 315,992 - PfGW456L13_271 0.73 -2.4 315,992 - PfGW456L13_271 0.73 -1.9 315,992 - PfGW456L13_271 0.73 +0.1 315,992 - PfGW456L13_271 0.73 -0.7 315,992 - PfGW456L13_271 0.73 -1.9 315,992 - PfGW456L13_271 0.73 -1.4 315,992 - PfGW456L13_271 0.73 -1.4 315,992 - PfGW456L13_271 0.73 -4.4 315,992 - PfGW456L13_271 0.73 -0.5 315,992 - PfGW456L13_271 0.73 +3.0 316,205 - PfGW456L13_271 0.88 -5.3 316,355 + -3.0 316,356 - -1.6 316,356 - -1.4 316,377 - +0.2 316,488 + +2.2 316,488 + -0.3 316,489 - -1.6 316,489 - -3.6 316,545 + -1.6 316,545 + -1.1 316,546 - -0.3 316,546 - -2.0 316,546 - +0.8 316,546 - -1.3 316,546 - +0.8 316,546 - -0.8 316,546 - -3.9 316,578 + -1.3 316,579 - +0.6 316,668 + -2.5 316,704 + -1.4 316,722 - -0.5 316,722 - +1.8 316,746 + +1.1 316,746 + -0.8 316,746 + +0.7 316,746 + -1.1 316,747 - +0.6 316,798 + -1.0 316,798 + -1.8 316,860 + PfGW456L13_272 0.10 -1.9 316,861 - PfGW456L13_272 0.10 -0.9 316,861 - PfGW456L13_272 0.10 -2.8 316,861 - PfGW456L13_272 0.10 -3.0 316,962 + PfGW456L13_272 0.13 -2.1 316,962 + PfGW456L13_272 0.13 -2.9 316,962 + PfGW456L13_272 0.13 +0.1 316,963 - PfGW456L13_272 0.13 -2.6 316,963 - PfGW456L13_272 0.13 -0.8 316,986 + PfGW456L13_272 0.13 -0.9 316,986 + PfGW456L13_272 0.13 -0.5 316,986 + PfGW456L13_272 0.13 -3.2 316,986 + PfGW456L13_272 0.13 -1.7 316,986 + PfGW456L13_272 0.13 -2.1 316,986 + PfGW456L13_272 0.13 +0.7 316,987 - PfGW456L13_272 0.13 +0.2 316,987 - PfGW456L13_272 0.13 +0.1 316,987 - PfGW456L13_272 0.13 -2.3 316,987 - PfGW456L13_272 0.13 -2.7 316,987 - PfGW456L13_272 0.13 -0.4 316,987 - PfGW456L13_272 0.13 -2.0 316,987 - PfGW456L13_272 0.13 -1.5 316,987 - PfGW456L13_272 0.13 -3.5 316,987 - PfGW456L13_272 0.13 -1.2 316,987 - PfGW456L13_272 0.13 +0.7 316,987 - PfGW456L13_272 0.13 -1.3 316,987 - PfGW456L13_272 0.13 -0.2 316,987 - PfGW456L13_272 0.13 -0.2 317,143 + PfGW456L13_272 0.17 -1.7
Or see this region's nucleotide sequence