Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2644

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
2,944,517	+		PfGW456L13_2643	0.28	+2.2
2,944,518	-		PfGW456L13_2643	0.28	+2.6
2,944,543	+		PfGW456L13_2643	0.30	-0.8
2,944,543	+		PfGW456L13_2643	0.30	-3.2
2,944,543	+		PfGW456L13_2643	0.30	-1.8
2,944,544	-		PfGW456L13_2643	0.30	-0.1
2,944,544	-		PfGW456L13_2643	0.30	-0.7
2,944,584	+		PfGW456L13_2643	0.33	-3.5
2,944,648	+		PfGW456L13_2643	0.38	-3.3
2,944,648	+		PfGW456L13_2643	0.38	-0.9
2,944,648	+		PfGW456L13_2643	0.38	+1.3
2,944,648	+		PfGW456L13_2643	0.38	+1.5
2,944,648	+		PfGW456L13_2643	0.38	+0.7
2,944,648	+		PfGW456L13_2643	0.38	+0.9
2,944,648	+		PfGW456L13_2643	0.38	-2.2
2,944,648	+		PfGW456L13_2643	0.38	-0.4
2,944,648	+		PfGW456L13_2643	0.38	-1.5
2,944,649	-		PfGW456L13_2643	0.39	+1.3
2,944,649	-		PfGW456L13_2643	0.39	+1.7
2,944,649	-		PfGW456L13_2643	0.39	+3.9
2,944,649	-		PfGW456L13_2643	0.39	-0.2
2,944,816	+		PfGW456L13_2643	0.52	+1.1
2,944,816	+		PfGW456L13_2643	0.52	-0.4
2,944,816	+		PfGW456L13_2643	0.52	+2.3
2,944,816	+		PfGW456L13_2643	0.52	+1.2
2,944,817	-		PfGW456L13_2643	0.52	+0.3
2,944,817	-		PfGW456L13_2643	0.52	-0.3
2,944,817	-		PfGW456L13_2643	0.52	+0.4
2,944,817	-		PfGW456L13_2643	0.52	+0.6
2,944,817	-		PfGW456L13_2643	0.52	+1.3
2,944,817	-		PfGW456L13_2643	0.52	-0.2
2,944,817	-		PfGW456L13_2643	0.52	-2.5
2,944,817	-		PfGW456L13_2643	0.52	-1.3
2,944,817	-		PfGW456L13_2643	0.52	-1.3
2,944,817	-		PfGW456L13_2643	0.52	-1.8
2,945,056	+		PfGW456L13_2643	0.71	-0.4
2,945,057	-		PfGW456L13_2643	0.71	+0.1
2,945,057	-		PfGW456L13_2643	0.71	-2.2
2,945,057	-		PfGW456L13_2643	0.71	-1.9
2,945,092	+		PfGW456L13_2643	0.74	+2.7
2,945,092	+		PfGW456L13_2643	0.74	-3.1
2,945,093	-		PfGW456L13_2643	0.74	+2.6
2,945,093	-		PfGW456L13_2643	0.74	-3.4
2,945,203	+		PfGW456L13_2643	0.83	+2.4
2,945,341	+				+1.3
2,945,341	+				-2.9
2,945,341	+				+0.6
2,945,341	+				+1.0
2,945,342	-				-0.3
2,945,342	-				+0.7
2,945,342	-				+0.8
2,945,342	-				+0.1
2,945,419	+				+1.5
2,945,419	+				+0.3
2,945,419	+				-1.9
2,945,419	+				+1.2
2,945,419	+				-2.4
2,945,420	-				+0.4
2,945,420	-				+1.7
2,945,420	-				-1.9
2,945,420	-				-0.7
2,945,420	-				-0.3
2,945,420	-				-0.3
2,945,457	+				-2.5
2,945,457	+				-0.3
2,945,457	+				-3.7
2,945,457	+				+1.5
2,945,457	+				-1.5
2,945,458	-				+1.6
2,945,458	-				+2.1
2,945,458	-				-0.2
2,945,458	-				-0.6
2,945,488	-				-1.4
2,945,488	-				-0.3
2,945,503	+				+2.1
2,945,503	+				-3.1
2,945,503	+				-1.0
2,945,504	-				-1.8
2,945,504	-				-0.7
2,945,504	-				+0.3
2,945,504	-				+2.0
2,945,504	-				-1.4
2,945,610	+		PfGW456L13_2644	0.40	+2.0
2,945,610	+		PfGW456L13_2644	0.40	-2.1
2,945,639	+		PfGW456L13_2644	0.51	-2.3
2,945,639	+		PfGW456L13_2644	0.51	-2.3
2,945,640	-		PfGW456L13_2644	0.52	-1.7
2,945,640	-		PfGW456L13_2644	0.52	-1.1
2,945,642	-		PfGW456L13_2644	0.52	-3.4
2,945,769	-				+2.3
2,945,769	-				+0.3
2,945,805	+				-1.1
2,945,805	+				-3.3
2,945,806	-				-0.6
2,945,806	-				-0.4
2,945,806	-				-0.5
2,945,806	-				-0.3
2,945,816	-				-1.2
2,945,816	-				+1.2
2,945,816	-				+0.1
2,945,816	-				-2.4
2,945,816	-				+1.4
2,945,835	+				-1.7
2,945,839	+				-2.9
2,945,839	+				+0.9
2,945,840	-				-3.6
2,945,840	-				+0.0
2,945,840	-				+0.6
2,945,840	-				+1.3
2,945,865	-				+1.1
2,945,880	+				+0.0
2,945,889	+				+0.9
2,945,889	+				+2.1
2,945,963	+				+3.2
2,945,963	+				+0.0
2,945,963	+				-0.9
2,945,963	+				+0.3
2,945,963	+				+0.4
2,945,963	+				+0.5
2,945,963	+				-0.5
2,945,963	+				-0.9
2,945,964	-				-1.7
2,945,964	-				-1.8
2,945,964	-				+0.3
2,946,019	-				+2.1
2,946,118	-				+0.7
2,946,134	+				-2.2
2,946,134	+				-0.9
2,946,134	+				+4.0
2,946,134	+				-1.3
2,946,135	-				-2.3
2,946,135	-				+1.3
2,946,135	-				-2.3
2,946,161	+		PfGW456L13_2645	0.12	+1.4
2,946,161	+		PfGW456L13_2645	0.12	-1.1
2,946,162	-		PfGW456L13_2645	0.13	-0.1
2,946,162	-		PfGW456L13_2645	0.13	+0.3
2,946,162	-		PfGW456L13_2645	0.13	-1.3
2,946,267	+		PfGW456L13_2645	0.55	+0.4
2,946,267	+		PfGW456L13_2645	0.55	+0.5
2,946,267	+		PfGW456L13_2645	0.55	-0.7
2,946,267	+		PfGW456L13_2645	0.55	-1.9
2,946,267	+		PfGW456L13_2645	0.55	-1.0
2,946,267	+		PfGW456L13_2645	0.55	-1.3
2,946,268	-		PfGW456L13_2645	0.56	-2.6
2,946,268	-		PfGW456L13_2645	0.56	-2.0
2,946,268	-		PfGW456L13_2645	0.56	+0.7
2,946,268	-		PfGW456L13_2645	0.56	+0.3
2,946,323	+		PfGW456L13_2645	0.78	+1.3
2,946,349	-		PfGW456L13_2645	0.89	+1.7
2,946,394	-				-0.3
2,946,406	+				+0.2
2,946,406	+				-3.5
2,946,406	+				+1.1
2,946,406	+				-3.3
2,946,406	+				+1.6
2,946,406	+				+1.5
2,946,406	+				-0.7
2,946,407	-				+0.3
2,946,407	-				+0.2
2,946,407	-				+2.7
2,946,407	-				-1.7
2,946,407	-				-0.0
2,946,407	-				-2.7
2,946,407	-				-2.0
2,946,411	+				-0.8
2,946,508	-				-2.2
2,946,666	+		PfGW456L13_2646	0.11	+0.6
2,946,666	+		PfGW456L13_2646	0.11	-0.0
2,946,667	-		PfGW456L13_2646	0.11	-2.4
2,946,691	-		PfGW456L13_2646	0.13	+2.6