Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2476 and PfGW456L13_2477 are separated by 20 nucleotides PfGW456L13_2477 and PfGW456L13_2478 are separated by 144 nucleotides PfGW456L13_2478 and PfGW456L13_2479 are separated by 148 nucleotides
PfGW456L13_2476 - Putative sulfate permease, at 2,745,342 to 2,746,127
_2476
PfGW456L13_2477 - Lactoylglutathione lyase and related lyases, at 2,746,148 to 2,746,552
_2477
PfGW456L13_2478 - FIG00956937: hypothetical protein, at 2,746,697 to 2,747,248
_2478
PfGW456L13_2479 - Beta-lactamase (EC 3.5.2.6), at 2,747,397 to 2,748,536
_2479
Position (kb)
2746
2747
2748 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 2745.756 kb on + strand, within PfGW456L13_2476 at 2745.756 kb on + strand, within PfGW456L13_2476 at 2745.756 kb on + strand, within PfGW456L13_2476 at 2745.757 kb on - strand, within PfGW456L13_2476 at 2745.757 kb on - strand, within PfGW456L13_2476 at 2745.757 kb on - strand, within PfGW456L13_2476 at 2745.757 kb on - strand, within PfGW456L13_2476 at 2746.000 kb on - strand, within PfGW456L13_2476 at 2746.030 kb on - strand, within PfGW456L13_2476 at 2746.030 kb on - strand, within PfGW456L13_2476 at 2746.111 kb on - strand at 2746.197 kb on + strand, within PfGW456L13_2477 at 2746.197 kb on + strand, within PfGW456L13_2477 at 2746.197 kb on + strand, within PfGW456L13_2477 at 2746.198 kb on - strand, within PfGW456L13_2477 at 2746.219 kb on - strand, within PfGW456L13_2477 at 2746.333 kb on - strand, within PfGW456L13_2477 at 2746.333 kb on - strand, within PfGW456L13_2477 at 2746.366 kb on - strand, within PfGW456L13_2477 at 2746.380 kb on - strand, within PfGW456L13_2477 at 2746.380 kb on - strand, within PfGW456L13_2477 at 2746.510 kb on + strand, within PfGW456L13_2477 at 2746.510 kb on + strand, within PfGW456L13_2477 at 2746.511 kb on - strand, within PfGW456L13_2477 at 2746.566 kb on - strand at 2746.599 kb on + strand at 2746.599 kb on + strand at 2746.600 kb on - strand at 2746.600 kb on - strand at 2746.600 kb on - strand at 2746.600 kb on - strand at 2746.622 kb on + strand at 2746.623 kb on - strand at 2746.623 kb on - strand at 2746.631 kb on + strand at 2746.631 kb on + strand at 2746.632 kb on - strand at 2746.632 kb on - strand at 2746.724 kb on - strand at 2746.724 kb on - strand at 2746.913 kb on + strand, within PfGW456L13_2478 at 2746.914 kb on - strand, within PfGW456L13_2478 at 2746.914 kb on - strand, within PfGW456L13_2478 at 2746.921 kb on - strand, within PfGW456L13_2478 at 2747.132 kb on - strand, within PfGW456L13_2478 at 2747.321 kb on + strand at 2747.321 kb on + strand at 2747.322 kb on - strand at 2747.322 kb on - strand at 2747.399 kb on - strand at 2747.418 kb on + strand at 2747.418 kb on + strand at 2747.503 kb on + strand at 2747.503 kb on + strand at 2747.503 kb on + strand at 2747.504 kb on - strand at 2747.504 kb on - strand at 2747.504 kb on - strand at 2747.504 kb on - strand at 2747.504 kb on - strand at 2747.512 kb on + strand at 2747.512 kb on + strand, within PfGW456L13_2479 at 2747.512 kb on + strand, within PfGW456L13_2479 at 2747.512 kb on + strand, within PfGW456L13_2479 at 2747.512 kb on + strand, within PfGW456L13_2479 at 2747.512 kb on + strand, within PfGW456L13_2479 at 2747.512 kb on + strand at 2747.512 kb on + strand, within PfGW456L13_2479 at 2747.512 kb on + strand, within PfGW456L13_2479 at 2747.512 kb on + strand, within PfGW456L13_2479 at 2747.512 kb on + strand, within PfGW456L13_2479 at 2747.512 kb on + strand, within PfGW456L13_2479 at 2747.512 kb on + strand, within PfGW456L13_2479 at 2747.512 kb on + strand, within PfGW456L13_2479 at 2747.512 kb on + strand, within PfGW456L13_2479 at 2747.512 kb on + strand, within PfGW456L13_2479 at 2747.512 kb on + strand, within PfGW456L13_2479 at 2747.513 kb on - strand, within PfGW456L13_2479 at 2747.513 kb on - strand, within PfGW456L13_2479 at 2747.513 kb on - strand, within PfGW456L13_2479 at 2747.513 kb on - strand, within PfGW456L13_2479 at 2747.513 kb on - strand, within PfGW456L13_2479 at 2747.513 kb on - strand, within PfGW456L13_2479 at 2747.513 kb on - strand, within PfGW456L13_2479 at 2747.513 kb on - strand, within PfGW456L13_2479 at 2747.513 kb on - strand, within PfGW456L13_2479 at 2747.513 kb on - strand, within PfGW456L13_2479 at 2747.513 kb on - strand, within PfGW456L13_2479 at 2747.513 kb on - strand, within PfGW456L13_2479 at 2747.513 kb on - strand, within PfGW456L13_2479 at 2747.513 kb on - strand, within PfGW456L13_2479 at 2747.513 kb on - strand, within PfGW456L13_2479 at 2747.513 kb on - strand, within PfGW456L13_2479 at 2747.513 kb on - strand, within PfGW456L13_2479 at 2747.665 kb on + strand, within PfGW456L13_2479 at 2747.665 kb on + strand, within PfGW456L13_2479 at 2747.665 kb on + strand, within PfGW456L13_2479 at 2747.666 kb on - strand, within PfGW456L13_2479 at 2747.666 kb on - strand, within PfGW456L13_2479 at 2747.666 kb on - strand, within PfGW456L13_2479 at 2747.666 kb on - strand, within PfGW456L13_2479 at 2747.666 kb on - strand, within PfGW456L13_2479 at 2747.666 kb on - strand, within PfGW456L13_2479 at 2747.666 kb on - strand, within PfGW456L13_2479 at 2747.666 kb on - strand, within PfGW456L13_2479 at 2747.666 kb on - strand, within PfGW456L13_2479 at 2747.694 kb on - strand, within PfGW456L13_2479 at 2747.701 kb on - strand, within PfGW456L13_2479 at 2747.707 kb on + strand, within PfGW456L13_2479 at 2747.707 kb on + strand, within PfGW456L13_2479 at 2747.707 kb on + strand, within PfGW456L13_2479 at 2747.708 kb on - strand, within PfGW456L13_2479 at 2747.708 kb on - strand, within PfGW456L13_2479 at 2747.708 kb on - strand, within PfGW456L13_2479 at 2747.708 kb on - strand, within PfGW456L13_2479 at 2747.708 kb on - strand, within PfGW456L13_2479 at 2747.708 kb on - strand, within PfGW456L13_2479 at 2747.710 kb on + strand, within PfGW456L13_2479 at 2747.785 kb on + strand, within PfGW456L13_2479 at 2747.785 kb on + strand, within PfGW456L13_2479 at 2747.785 kb on + strand, within PfGW456L13_2479 at 2747.785 kb on + strand, within PfGW456L13_2479 at 2747.786 kb on - strand, within PfGW456L13_2479 at 2747.786 kb on - strand, within PfGW456L13_2479 at 2747.786 kb on - strand, within PfGW456L13_2479 at 2747.786 kb on - strand, within PfGW456L13_2479 at 2747.786 kb on - strand, within PfGW456L13_2479 at 2747.786 kb on - strand, within PfGW456L13_2479 at 2747.821 kb on + strand, within PfGW456L13_2479 at 2747.822 kb on - strand, within PfGW456L13_2479 at 2747.923 kb on + strand, within PfGW456L13_2479 at 2747.923 kb on + strand, within PfGW456L13_2479 at 2747.923 kb on + strand, within PfGW456L13_2479 at 2747.923 kb on + strand, within PfGW456L13_2479 at 2747.923 kb on + strand, within PfGW456L13_2479 at 2747.923 kb on + strand, within PfGW456L13_2479 at 2747.923 kb on + strand, within PfGW456L13_2479 at 2747.923 kb on + strand, within PfGW456L13_2479 at 2747.923 kb on + strand, within PfGW456L13_2479 at 2747.923 kb on + strand, within PfGW456L13_2479 at 2747.923 kb on + strand, within PfGW456L13_2479 at 2747.923 kb on + strand, within PfGW456L13_2479 at 2747.923 kb on + strand, within PfGW456L13_2479 at 2747.923 kb on + strand, within PfGW456L13_2479 at 2747.923 kb on + strand, within PfGW456L13_2479 at 2747.923 kb on + strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2747.924 kb on - strand, within PfGW456L13_2479 at 2748.037 kb on + strand, within PfGW456L13_2479 at 2748.037 kb on + strand, within PfGW456L13_2479 at 2748.038 kb on - strand, within PfGW456L13_2479 at 2748.062 kb on - strand, within PfGW456L13_2479 at 2748.082 kb on + strand, within PfGW456L13_2479 at 2748.082 kb on + strand, within PfGW456L13_2479 at 2748.082 kb on + strand, within PfGW456L13_2479 at 2748.082 kb on + strand, within PfGW456L13_2479 at 2748.082 kb on + strand, within PfGW456L13_2479 at 2748.082 kb on + strand, within PfGW456L13_2479 at 2748.083 kb on - strand, within PfGW456L13_2479 at 2748.083 kb on - strand, within PfGW456L13_2479
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 2,745,756 + PfGW456L13_2476 0.53 +2.2 2,745,756 + PfGW456L13_2476 0.53 +0.5 2,745,756 + PfGW456L13_2476 0.53 +2.5 2,745,757 - PfGW456L13_2476 0.53 +1.5 2,745,757 - PfGW456L13_2476 0.53 -0.2 2,745,757 - PfGW456L13_2476 0.53 -2.7 2,745,757 - PfGW456L13_2476 0.53 -1.4 2,746,000 - PfGW456L13_2476 0.84 +1.7 2,746,030 - PfGW456L13_2476 0.88 -2.2 2,746,030 - PfGW456L13_2476 0.88 -1.0 2,746,111 - -2.5 2,746,197 + PfGW456L13_2477 0.12 -2.1 2,746,197 + PfGW456L13_2477 0.12 +0.1 2,746,197 + PfGW456L13_2477 0.12 -2.0 2,746,198 - PfGW456L13_2477 0.12 +0.8 2,746,219 - PfGW456L13_2477 0.18 -1.8 2,746,333 - PfGW456L13_2477 0.46 -2.2 2,746,333 - PfGW456L13_2477 0.46 +0.2 2,746,366 - PfGW456L13_2477 0.54 -2.0 2,746,380 - PfGW456L13_2477 0.57 -1.3 2,746,380 - PfGW456L13_2477 0.57 -2.1 2,746,510 + PfGW456L13_2477 0.89 +1.4 2,746,510 + PfGW456L13_2477 0.89 -2.6 2,746,511 - PfGW456L13_2477 0.90 -1.2 2,746,566 - -2.4 2,746,599 + +1.8 2,746,599 + -1.5 2,746,600 - +2.1 2,746,600 - +1.9 2,746,600 - -2.8 2,746,600 - +0.9 2,746,622 + +0.9 2,746,623 - -2.9 2,746,623 - +2.6 2,746,631 + -1.0 2,746,631 + +0.4 2,746,632 - -0.9 2,746,632 - -0.0 2,746,724 - -0.9 2,746,724 - -3.4 2,746,913 + PfGW456L13_2478 0.39 -0.7 2,746,914 - PfGW456L13_2478 0.39 -0.7 2,746,914 - PfGW456L13_2478 0.39 -3.4 2,746,921 - PfGW456L13_2478 0.41 -0.4 2,747,132 - PfGW456L13_2478 0.79 -1.7 2,747,321 + +1.2 2,747,321 + -0.5 2,747,322 - +0.1 2,747,322 - +1.3 2,747,399 - +0.7 2,747,418 + -1.8 2,747,418 + -1.1 2,747,503 + +1.5 2,747,503 + -0.3 2,747,503 + -2.8 2,747,504 - +0.9 2,747,504 - -0.1 2,747,504 - -1.5 2,747,504 - -3.7 2,747,504 - +1.1 2,747,512 + +3.7 2,747,512 + PfGW456L13_2479 0.10 -1.7 2,747,512 + PfGW456L13_2479 0.10 -3.3 2,747,512 + PfGW456L13_2479 0.10 -1.1 2,747,512 + PfGW456L13_2479 0.10 -2.1 2,747,512 + PfGW456L13_2479 0.10 +1.0 2,747,512 + +4.5 2,747,512 + PfGW456L13_2479 0.10 +1.2 2,747,512 + PfGW456L13_2479 0.10 +0.3 2,747,512 + PfGW456L13_2479 0.10 +1.3 2,747,512 + PfGW456L13_2479 0.10 -0.8 2,747,512 + PfGW456L13_2479 0.10 -1.6 2,747,512 + PfGW456L13_2479 0.10 -2.9 2,747,512 + PfGW456L13_2479 0.10 -1.4 2,747,512 + PfGW456L13_2479 0.10 -0.1 2,747,512 + PfGW456L13_2479 0.10 -0.1 2,747,512 + PfGW456L13_2479 0.10 -0.9 2,747,513 - PfGW456L13_2479 0.10 -0.5 2,747,513 - PfGW456L13_2479 0.10 +0.5 2,747,513 - PfGW456L13_2479 0.10 -0.1 2,747,513 - PfGW456L13_2479 0.10 +0.8 2,747,513 - PfGW456L13_2479 0.10 +1.9 2,747,513 - PfGW456L13_2479 0.10 +2.1 2,747,513 - PfGW456L13_2479 0.10 -0.3 2,747,513 - PfGW456L13_2479 0.10 +1.9 2,747,513 - PfGW456L13_2479 0.10 +0.9 2,747,513 - PfGW456L13_2479 0.10 -0.7 2,747,513 - PfGW456L13_2479 0.10 -0.6 2,747,513 - PfGW456L13_2479 0.10 -1.3 2,747,513 - PfGW456L13_2479 0.10 -2.0 2,747,513 - PfGW456L13_2479 0.10 -0.5 2,747,513 - PfGW456L13_2479 0.10 +1.8 2,747,513 - PfGW456L13_2479 0.10 -1.5 2,747,513 - PfGW456L13_2479 0.10 -2.6 2,747,665 + PfGW456L13_2479 0.24 -0.3 2,747,665 + PfGW456L13_2479 0.24 -2.4 2,747,665 + PfGW456L13_2479 0.24 +0.9 2,747,666 - PfGW456L13_2479 0.24 +0.3 2,747,666 - PfGW456L13_2479 0.24 +1.7 2,747,666 - PfGW456L13_2479 0.24 -0.1 2,747,666 - PfGW456L13_2479 0.24 -0.7 2,747,666 - PfGW456L13_2479 0.24 +0.7 2,747,666 - PfGW456L13_2479 0.24 +1.0 2,747,666 - PfGW456L13_2479 0.24 -0.4 2,747,666 - PfGW456L13_2479 0.24 +1.7 2,747,666 - PfGW456L13_2479 0.24 +0.3 2,747,694 - PfGW456L13_2479 0.26 -0.7 2,747,701 - PfGW456L13_2479 0.27 -0.3 2,747,707 + PfGW456L13_2479 0.27 -3.2 2,747,707 + PfGW456L13_2479 0.27 -2.3 2,747,707 + PfGW456L13_2479 0.27 +0.0 2,747,708 - PfGW456L13_2479 0.27 +2.1 2,747,708 - PfGW456L13_2479 0.27 -3.5 2,747,708 - PfGW456L13_2479 0.27 -0.0 2,747,708 - PfGW456L13_2479 0.27 -2.8 2,747,708 - PfGW456L13_2479 0.27 -3.0 2,747,708 - PfGW456L13_2479 0.27 -1.3 2,747,710 + PfGW456L13_2479 0.27 +0.2 2,747,785 + PfGW456L13_2479 0.34 -1.5 2,747,785 + PfGW456L13_2479 0.34 -0.3 2,747,785 + PfGW456L13_2479 0.34 +1.7 2,747,785 + PfGW456L13_2479 0.34 +1.8 2,747,786 - PfGW456L13_2479 0.34 -2.3 2,747,786 - PfGW456L13_2479 0.34 -0.1 2,747,786 - PfGW456L13_2479 0.34 -0.9 2,747,786 - PfGW456L13_2479 0.34 -3.1 2,747,786 - PfGW456L13_2479 0.34 +1.5 2,747,786 - PfGW456L13_2479 0.34 +0.9 2,747,821 + PfGW456L13_2479 0.37 -0.2 2,747,822 - PfGW456L13_2479 0.37 -2.8 2,747,923 + PfGW456L13_2479 0.46 -3.2 2,747,923 + PfGW456L13_2479 0.46 +1.8 2,747,923 + PfGW456L13_2479 0.46 +1.7 2,747,923 + PfGW456L13_2479 0.46 -4.0 2,747,923 + PfGW456L13_2479 0.46 -0.5 2,747,923 + PfGW456L13_2479 0.46 +0.5 2,747,923 + PfGW456L13_2479 0.46 -2.6 2,747,923 + PfGW456L13_2479 0.46 +0.6 2,747,923 + PfGW456L13_2479 0.46 -1.8 2,747,923 + PfGW456L13_2479 0.46 +2.2 2,747,923 + PfGW456L13_2479 0.46 -0.4 2,747,923 + PfGW456L13_2479 0.46 +0.7 2,747,923 + PfGW456L13_2479 0.46 +0.0 2,747,923 + PfGW456L13_2479 0.46 -2.1 2,747,923 + PfGW456L13_2479 0.46 -1.8 2,747,923 + PfGW456L13_2479 0.46 +2.7 2,747,924 - PfGW456L13_2479 0.46 +2.2 2,747,924 - PfGW456L13_2479 0.46 +0.9 2,747,924 - PfGW456L13_2479 0.46 -1.5 2,747,924 - PfGW456L13_2479 0.46 -0.3 2,747,924 - PfGW456L13_2479 0.46 +2.8 2,747,924 - PfGW456L13_2479 0.46 +3.4 2,747,924 - PfGW456L13_2479 0.46 -2.8 2,747,924 - PfGW456L13_2479 0.46 +1.9 2,747,924 - PfGW456L13_2479 0.46 -0.7 2,747,924 - PfGW456L13_2479 0.46 -2.5 2,747,924 - PfGW456L13_2479 0.46 +0.8 2,747,924 - PfGW456L13_2479 0.46 +1.8 2,747,924 - PfGW456L13_2479 0.46 -1.1 2,747,924 - PfGW456L13_2479 0.46 +0.5 2,747,924 - PfGW456L13_2479 0.46 +0.4 2,747,924 - PfGW456L13_2479 0.46 -2.6 2,747,924 - PfGW456L13_2479 0.46 -3.6 2,747,924 - PfGW456L13_2479 0.46 +2.0 2,747,924 - PfGW456L13_2479 0.46 -0.4 2,747,924 - PfGW456L13_2479 0.46 +0.4 2,747,924 - PfGW456L13_2479 0.46 -2.5 2,748,037 + PfGW456L13_2479 0.56 -0.2 2,748,037 + PfGW456L13_2479 0.56 -0.8 2,748,038 - PfGW456L13_2479 0.56 -1.6 2,748,062 - PfGW456L13_2479 0.58 -0.9 2,748,082 + PfGW456L13_2479 0.60 +1.5 2,748,082 + PfGW456L13_2479 0.60 -0.9 2,748,082 + PfGW456L13_2479 0.60 -0.0 2,748,082 + PfGW456L13_2479 0.60 +1.8 2,748,082 + PfGW456L13_2479 0.60 -0.1 2,748,082 + PfGW456L13_2479 0.60 +0.9 2,748,083 - PfGW456L13_2479 0.60 +0.9 2,748,083 - PfGW456L13_2479 0.60 -2.1
Or see this region's nucleotide sequence