Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2279

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
2,491,311	-		PfGW456L13_2278	0.38	-1.9
2,491,460	+		PfGW456L13_2278	0.57	-1.1
2,491,460	+		PfGW456L13_2278	0.57	-2.6
2,491,473	+		PfGW456L13_2278	0.59	-0.3
2,491,474	-		PfGW456L13_2278	0.59	-0.3
2,491,474	-		PfGW456L13_2278	0.59	-1.5
2,491,714	+		PfGW456L13_2278	0.89	+2.2
2,491,715	-		PfGW456L13_2278	0.89	-1.2
2,491,824	+				-2.0
2,491,824	+				-2.3
2,491,824	+				+1.6
2,491,824	+				+1.8
2,491,824	+				-1.6
2,491,824	+				+0.2
2,491,824	+				+1.8
2,491,824	+				-1.3
2,491,824	+				-2.4
2,491,824	+				-0.6
2,491,824	+				+0.4
2,491,824	+				-2.1
2,491,824	+				-1.6
2,491,824	+				+0.1
2,491,824	+				-0.8
2,491,824	+				-1.9
2,491,825	-				+1.0
2,491,825	-				+0.6
2,491,825	-				+2.2
2,491,825	-				+0.1
2,491,825	-				-1.7
2,491,825	-				+0.7
2,491,825	-				-0.1
2,491,825	-				-1.4
2,491,825	-				-1.4
2,491,825	-				-1.4
2,491,825	-				+2.0
2,491,825	-				-0.6
2,491,840	-				-2.9
2,491,898	+				+0.5
2,491,969	-				+0.8
2,492,013	-				-1.2
2,492,013	-				+1.4
2,492,038	-				-0.6
2,492,052	-				-1.3
2,492,052	-				-1.9
2,492,052	-				-0.1
2,492,063	+				+1.4
2,492,063	+				-0.6
2,492,063	+				+0.5
2,492,063	+				+1.0
2,492,064	-				-1.2
2,492,064	-				+0.8
2,492,064	-				-3.2
2,492,064	-				+1.2
2,492,064	-				-1.8
2,492,064	-				-1.8
2,492,064	-				+2.6
2,492,066	+				-1.6
2,492,066	+				-0.6
2,492,066	+				+0.3
2,492,066	+				-1.9
2,492,066	+				+0.6
2,492,066	+				-1.5
2,492,066	+				+0.9
2,492,067	-				-2.0
2,492,067	-				+0.6
2,492,067	-				-1.6
2,492,067	-				-1.4
2,492,067	-				+1.0
2,492,067	-				-0.6
2,492,067	-				-1.8
2,492,067	-				+0.3
2,492,067	-				-3.5
2,492,073	+				+1.0
2,492,073	+				+1.7
2,492,073	+				-3.4
2,492,073	+				+0.9
2,492,073	+				-1.2
2,492,073	+				+2.5
2,492,073	+				-0.5
2,492,073	+				-0.1
2,492,073	+				-1.9
2,492,073	+				+1.0
2,492,074	-				-2.8
2,492,074	-				-2.4
2,492,074	-				+2.7
2,492,074	-				-1.8
2,492,074	-				-1.2
2,492,074	-				-2.3
2,492,074	-				-1.9
2,492,074	-				-2.4
2,492,078	+				-0.1
2,492,079	-				+1.6
2,492,096	+				-0.1
2,492,096	+				+1.4
2,492,096	+				+1.5
2,492,096	+				-3.3
2,492,096	+				+0.3
2,492,096	+				-1.6
2,492,097	-				+0.7
2,492,097	-				-3.4
2,492,097	-				-2.6
2,492,097	-				-2.8
2,492,097	-				-1.4
2,492,097	-				+2.6
2,492,100	+				+2.3
2,492,100	+				+0.4
2,492,100	+				+1.8
2,492,100	+				-2.3
2,492,100	+				+1.0
2,492,101	-				-3.1
2,492,101	-				-1.1
2,492,101	-				+2.3
2,492,101	-				-0.9
2,492,101	-				-0.2
2,492,101	-				-2.5
2,492,101	-				-0.8
2,492,101	-				+0.9
2,492,101	-				+0.5
2,492,146	-				-0.1
2,492,189	+				-2.5
2,492,189	+				-0.1
2,492,189	+				+2.5
2,492,203	-				+2.0
2,492,204	+				-2.5
2,492,204	+				-1.9
2,492,204	+				-2.4
2,492,204	+				+1.6
2,492,204	+				+1.9
2,492,204	+				+2.5
2,492,205	-				-3.3
2,492,205	-				+0.9
2,492,205	-				+0.0
2,492,205	-				+1.4
2,492,205	-				-1.2
2,492,205	-				-2.3
2,492,205	-				-0.5
2,492,208	+				-0.9
2,492,208	+				-1.2
2,492,208	+				+2.6
2,492,209	-				+0.7
2,492,209	-				-2.0
2,492,209	-				-1.6
2,492,209	-				-1.8
2,492,209	-				-2.4
2,492,209	-				-1.2
2,492,209	-				-1.8
2,492,215	+				+1.7
2,492,215	+				-2.7
2,492,245	+				+1.4
2,492,262	-				-2.0
2,492,316	+				+0.1
2,492,316	+				+1.3
2,492,321	+				-0.2
2,492,322	-				+0.8
2,492,554	+		PfGW456L13_2279	0.55	+1.8
2,492,555	-		PfGW456L13_2279	0.55	+2.8
2,492,555	-		PfGW456L13_2279	0.55	-1.4
2,492,696	-		PfGW456L13_2279	0.85	-3.4
2,492,752	+				+1.6
2,492,753	-				-1.9
2,492,767	+				-2.0
2,492,767	+				-2.3
2,492,767	+				-1.5
2,492,767	+				+2.1
2,492,768	-				+2.7
2,492,771	+				-0.9
2,492,771	+				-2.7
2,492,771	+				+0.4
2,492,771	+				-1.8
2,492,771	+				+1.5
2,492,771	+				-2.0
2,492,771	+				-3.2
2,492,772	-				-2.5
2,492,772	-				-2.7
2,492,772	-				+0.9
2,492,772	-				-0.0
2,492,772	-				-3.3
2,492,772	-				+1.1
2,492,772	-				-2.5
2,492,772	-				+0.6
2,492,772	-				-0.6
2,492,772	-				-2.2
2,492,772	-				-1.2
2,492,864	+				-4.0
2,492,975	-				-1.6
2,492,975	-				-0.9
2,492,997	+				-4.1
2,492,998	-				-2.8
2,493,015	+				-3.0
2,493,021	+				+0.6
2,493,092	+				+1.5
2,493,092	+				+1.9
2,493,092	+				+2.3
2,493,092	+				+0.2
2,493,093	-				-2.0
2,493,093	-				+0.4
2,493,093	-				+1.3
2,493,121	-				-3.9
2,493,152	+				-2.8
2,493,153	-				-1.6
2,493,344	+		PfGW456L13_2280	0.12	-1.9
2,493,345	-		PfGW456L13_2280	0.12	+0.9
2,493,350	-		PfGW456L13_2280	0.13	+0.7
2,493,519	+		PfGW456L13_2280	0.31	+1.1
2,493,520	-		PfGW456L13_2280	0.31	-3.4
2,493,520	-		PfGW456L13_2280	0.31	+1.3
2,493,520	-		PfGW456L13_2280	0.31	+3.3
2,493,624	+		PfGW456L13_2280	0.42	-1.9
2,493,625	-		PfGW456L13_2280	0.42	-0.0
2,493,625	-		PfGW456L13_2280	0.42	-1.8
2,493,625	-		PfGW456L13_2280	0.42	+0.9
2,493,705	+		PfGW456L13_2280	0.51	-1.8
2,493,706	-		PfGW456L13_2280	0.51	-1.7
2,493,706	-		PfGW456L13_2280	0.51	-0.0