Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_204 and PfGW456L13_205 overlap by 42 nucleotides PfGW456L13_205 and PfGW456L13_206 are separated by 607 nucleotides
PfGW456L13_204 - Carbamoyltransferase in large core OS assembly cluster, at 233,603 to 235,360
_204
PfGW456L13_205 - hypothetical protein, at 235,319 to 235,483
_205
PfGW456L13_206 - serine/threonine protein kinase, at 236,091 to 237,542
_206
Position (kb) 235
236 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7
8
9 at 234.418 kb on - strand, within PfGW456L13_204 at 234.418 kb on - strand, within PfGW456L13_204 at 234.457 kb on - strand, within PfGW456L13_204 at 234.457 kb on - strand, within PfGW456L13_204 at 234.457 kb on - strand, within PfGW456L13_204 at 234.457 kb on - strand, within PfGW456L13_204 at 234.514 kb on - strand, within PfGW456L13_204 at 234.522 kb on + strand, within PfGW456L13_204 at 234.522 kb on + strand, within PfGW456L13_204 at 234.522 kb on + strand, within PfGW456L13_204 at 234.522 kb on + strand, within PfGW456L13_204 at 234.522 kb on + strand, within PfGW456L13_204 at 234.522 kb on + strand, within PfGW456L13_204 at 234.523 kb on - strand, within PfGW456L13_204 at 234.523 kb on - strand, within PfGW456L13_204 at 234.523 kb on - strand, within PfGW456L13_204 at 234.523 kb on - strand, within PfGW456L13_204 at 234.523 kb on - strand, within PfGW456L13_204 at 234.523 kb on - strand, within PfGW456L13_204 at 234.523 kb on - strand, within PfGW456L13_204 at 234.523 kb on - strand, within PfGW456L13_204 at 234.523 kb on - strand, within PfGW456L13_204 at 234.523 kb on - strand, within PfGW456L13_204 at 234.523 kb on - strand, within PfGW456L13_204 at 234.523 kb on - strand, within PfGW456L13_204 at 234.588 kb on + strand, within PfGW456L13_204 at 234.588 kb on + strand, within PfGW456L13_204 at 234.588 kb on + strand, within PfGW456L13_204 at 234.589 kb on - strand, within PfGW456L13_204 at 234.589 kb on - strand, within PfGW456L13_204 at 234.589 kb on - strand, within PfGW456L13_204 at 234.589 kb on - strand, within PfGW456L13_204 at 234.589 kb on - strand, within PfGW456L13_204 at 234.589 kb on - strand, within PfGW456L13_204 at 234.589 kb on - strand, within PfGW456L13_204 at 234.589 kb on - strand, within PfGW456L13_204 at 234.589 kb on - strand, within PfGW456L13_204 at 234.589 kb on - strand, within PfGW456L13_204 at 234.589 kb on - strand, within PfGW456L13_204 at 234.591 kb on + strand, within PfGW456L13_204 at 234.591 kb on + strand, within PfGW456L13_204 at 234.591 kb on + strand, within PfGW456L13_204 at 234.592 kb on - strand, within PfGW456L13_204 at 234.592 kb on - strand, within PfGW456L13_204 at 234.697 kb on - strand, within PfGW456L13_204 at 234.787 kb on - strand, within PfGW456L13_204 at 234.787 kb on - strand, within PfGW456L13_204 at 234.787 kb on - strand, within PfGW456L13_204 at 234.934 kb on - strand, within PfGW456L13_204 at 235.045 kb on - strand, within PfGW456L13_204 at 235.045 kb on - strand, within PfGW456L13_204 at 235.093 kb on - strand, within PfGW456L13_204 at 235.111 kb on - strand, within PfGW456L13_204 at 235.221 kb on + strand at 235.221 kb on + strand at 235.247 kb on - strand at 235.254 kb on - strand at 235.298 kb on - strand at 235.299 kb on + strand at 235.299 kb on + strand at 235.299 kb on + strand at 235.300 kb on - strand at 235.300 kb on - strand at 235.300 kb on - strand at 235.300 kb on - strand at 235.300 kb on - strand at 235.300 kb on - strand at 235.300 kb on - strand at 235.368 kb on + strand, within PfGW456L13_205 at 235.368 kb on + strand, within PfGW456L13_205 at 235.369 kb on - strand, within PfGW456L13_205 at 235.369 kb on - strand, within PfGW456L13_205 at 235.378 kb on - strand, within PfGW456L13_205 at 235.378 kb on - strand, within PfGW456L13_205 at 235.378 kb on - strand, within PfGW456L13_205 at 235.411 kb on - strand, within PfGW456L13_205 at 235.441 kb on + strand, within PfGW456L13_205 at 235.442 kb on - strand, within PfGW456L13_205 at 235.442 kb on - strand, within PfGW456L13_205 at 235.442 kb on - strand, within PfGW456L13_205 at 235.454 kb on + strand, within PfGW456L13_205 at 235.455 kb on - strand, within PfGW456L13_205 at 235.456 kb on + strand, within PfGW456L13_205 at 235.457 kb on - strand, within PfGW456L13_205 at 235.457 kb on - strand, within PfGW456L13_205 at 235.457 kb on - strand, within PfGW456L13_205 at 235.461 kb on + strand, within PfGW456L13_205 at 235.461 kb on + strand, within PfGW456L13_205 at 235.481 kb on + strand at 235.549 kb on + strand at 235.549 kb on + strand at 235.549 kb on + strand at 235.549 kb on + strand at 235.549 kb on + strand at 235.550 kb on - strand at 235.550 kb on - strand at 235.550 kb on - strand at 235.550 kb on - strand at 235.550 kb on - strand at 235.559 kb on + strand at 235.559 kb on + strand at 235.560 kb on - strand at 235.591 kb on + strand at 235.641 kb on + strand at 235.641 kb on + strand at 235.642 kb on - strand at 235.665 kb on - strand at 235.714 kb on + strand at 235.714 kb on + strand at 235.714 kb on + strand at 235.715 kb on - strand at 235.738 kb on + strand at 235.738 kb on + strand at 235.738 kb on + strand at 235.738 kb on + strand at 235.738 kb on + strand at 235.739 kb on - strand at 235.739 kb on - strand at 235.739 kb on - strand at 235.827 kb on + strand at 235.828 kb on - strand at 235.892 kb on + strand at 235.892 kb on + strand at 235.892 kb on + strand at 235.893 kb on - strand at 235.893 kb on - strand at 235.893 kb on - strand at 236.039 kb on + strand at 236.039 kb on + strand at 236.039 kb on + strand at 236.039 kb on + strand at 236.039 kb on + strand at 236.039 kb on + strand at 236.040 kb on - strand at 236.040 kb on - strand at 236.040 kb on - strand at 236.040 kb on - strand at 236.040 kb on - strand at 236.092 kb on + strand at 236.093 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 234,418 - PfGW456L13_204 0.46 +0.2 234,418 - PfGW456L13_204 0.46 +2.0 234,457 - PfGW456L13_204 0.49 -1.5 234,457 - PfGW456L13_204 0.49 +0.8 234,457 - PfGW456L13_204 0.49 +0.1 234,457 - PfGW456L13_204 0.49 -0.1 234,514 - PfGW456L13_204 0.52 +1.2 234,522 + PfGW456L13_204 0.52 +7.3 234,522 + PfGW456L13_204 0.52 +8.6 234,522 + PfGW456L13_204 0.52 +7.6 234,522 + PfGW456L13_204 0.52 +6.9 234,522 + PfGW456L13_204 0.52 +8.2 234,522 + PfGW456L13_204 0.52 +8.0 234,523 - PfGW456L13_204 0.52 -1.4 234,523 - PfGW456L13_204 0.52 -1.0 234,523 - PfGW456L13_204 0.52 +2.5 234,523 - PfGW456L13_204 0.52 -1.0 234,523 - PfGW456L13_204 0.52 -1.5 234,523 - PfGW456L13_204 0.52 -2.6 234,523 - PfGW456L13_204 0.52 +0.3 234,523 - PfGW456L13_204 0.52 +2.7 234,523 - PfGW456L13_204 0.52 +0.9 234,523 - PfGW456L13_204 0.52 -2.6 234,523 - PfGW456L13_204 0.52 -1.9 234,523 - PfGW456L13_204 0.52 -0.7 234,588 + PfGW456L13_204 0.56 +7.9 234,588 + PfGW456L13_204 0.56 +8.4 234,588 + PfGW456L13_204 0.56 +8.2 234,589 - PfGW456L13_204 0.56 -0.5 234,589 - PfGW456L13_204 0.56 -0.2 234,589 - PfGW456L13_204 0.56 -0.7 234,589 - PfGW456L13_204 0.56 -0.4 234,589 - PfGW456L13_204 0.56 -1.1 234,589 - PfGW456L13_204 0.56 +0.8 234,589 - PfGW456L13_204 0.56 +3.1 234,589 - PfGW456L13_204 0.56 -0.1 234,589 - PfGW456L13_204 0.56 +0.6 234,589 - PfGW456L13_204 0.56 -2.4 234,589 - PfGW456L13_204 0.56 +0.9 234,591 + PfGW456L13_204 0.56 +7.0 234,591 + PfGW456L13_204 0.56 +9.2 234,591 + PfGW456L13_204 0.56 +7.7 234,592 - PfGW456L13_204 0.56 -3.7 234,592 - PfGW456L13_204 0.56 +2.7 234,697 - PfGW456L13_204 0.62 -0.0 234,787 - PfGW456L13_204 0.67 +0.9 234,787 - PfGW456L13_204 0.67 -2.1 234,787 - PfGW456L13_204 0.67 -1.5 234,934 - PfGW456L13_204 0.76 +0.9 235,045 - PfGW456L13_204 0.82 -1.4 235,045 - PfGW456L13_204 0.82 -2.3 235,093 - PfGW456L13_204 0.85 +0.1 235,111 - PfGW456L13_204 0.86 -0.2 235,221 + +7.6 235,221 + +7.9 235,247 - +0.2 235,254 - +0.3 235,298 - -2.1 235,299 + +8.2 235,299 + +7.5 235,299 + +6.6 235,300 - +1.3 235,300 - +0.3 235,300 - -0.3 235,300 - +1.8 235,300 - -1.6 235,300 - +0.7 235,300 - +1.7 235,368 + PfGW456L13_205 0.30 +8.0 235,368 + PfGW456L13_205 0.30 +7.2 235,369 - PfGW456L13_205 0.30 -0.4 235,369 - PfGW456L13_205 0.30 -1.1 235,378 - PfGW456L13_205 0.36 +1.8 235,378 - PfGW456L13_205 0.36 +0.3 235,378 - PfGW456L13_205 0.36 -2.4 235,411 - PfGW456L13_205 0.56 +0.5 235,441 + PfGW456L13_205 0.74 +6.5 235,442 - PfGW456L13_205 0.75 -2.8 235,442 - PfGW456L13_205 0.75 +0.8 235,442 - PfGW456L13_205 0.75 -1.8 235,454 + PfGW456L13_205 0.82 +6.2 235,455 - PfGW456L13_205 0.82 -1.2 235,456 + PfGW456L13_205 0.83 -3.2 235,457 - PfGW456L13_205 0.84 -3.2 235,457 - PfGW456L13_205 0.84 -1.4 235,457 - PfGW456L13_205 0.84 +1.7 235,461 + PfGW456L13_205 0.86 -1.7 235,461 + PfGW456L13_205 0.86 -3.6 235,481 + -1.3 235,549 + +0.5 235,549 + -2.4 235,549 + +1.1 235,549 + +0.2 235,549 + +1.4 235,550 - +1.3 235,550 - +0.7 235,550 - -2.2 235,550 - +1.7 235,550 - +0.6 235,559 + -1.1 235,559 + +1.4 235,560 - -1.4 235,591 + +1.3 235,641 + +1.3 235,641 + +1.3 235,642 - -2.4 235,665 - +1.2 235,714 + +0.8 235,714 + +0.2 235,714 + -2.8 235,715 - +1.4 235,738 + +0.8 235,738 + +1.8 235,738 + -2.9 235,738 + -0.2 235,738 + +0.8 235,739 - -1.9 235,739 - +0.3 235,739 - +2.3 235,827 + -3.3 235,828 - -2.1 235,892 + -1.5 235,892 + +0.3 235,892 + -2.0 235,893 - +0.9 235,893 - +1.8 235,893 - -1.4 236,039 + -0.1 236,039 + +0.6 236,039 + -2.0 236,039 + -3.1 236,039 + +2.2 236,039 + +1.6 236,040 - +1.6 236,040 - +1.3 236,040 - +0.6 236,040 - +1.9 236,040 - +2.4 236,092 + -1.4 236,093 - -2.5
Or see this region's nucleotide sequence