Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2014

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
2,217,270	+				-2.1
2,217,277	+				+2.3
2,217,294	+				-0.6
2,217,295	-				+1.2
2,217,311	-				+2.0
2,217,360	+				+2.1
2,217,360	+				-3.5
2,217,360	+				+1.0
2,217,360	+				+1.8
2,217,360	+				+1.8
2,217,361	-				-2.7
2,217,361	-				-0.9
2,217,363	+				-1.1
2,217,364	-				+2.9
2,217,375	+				-0.9
2,217,375	+				-3.3
2,217,376	-				+0.5
2,217,438	-				+1.2
2,217,456	+				-0.4
2,217,456	+				+1.3
2,217,456	+				-1.8
2,217,456	+				+0.4
2,217,456	+				-2.7
2,217,456	+				-3.0
2,217,457	-				+1.5
2,217,550	+		PfGW456L13_2013	0.12	-1.2
2,217,568	+		PfGW456L13_2013	0.14	-1.3
2,217,604	+		PfGW456L13_2013	0.19	+0.9
2,217,650	+		PfGW456L13_2013	0.25	+2.7
2,217,650	+		PfGW456L13_2013	0.25	-0.1
2,217,650	+		PfGW456L13_2013	0.25	-0.5
2,217,650	+		PfGW456L13_2013	0.25	-2.1
2,217,650	+		PfGW456L13_2013	0.25	-0.1
2,217,650	+		PfGW456L13_2013	0.25	+2.8
2,217,650	+		PfGW456L13_2013	0.25	-2.0
2,217,651	-		PfGW456L13_2013	0.25	-0.8
2,217,651	-		PfGW456L13_2013	0.25	+1.5
2,217,651	-		PfGW456L13_2013	0.25	+0.1
2,217,651	-		PfGW456L13_2013	0.25	+0.4
2,217,651	-		PfGW456L13_2013	0.25	+0.9
2,217,660	+		PfGW456L13_2013	0.26	+0.4
2,217,660	+		PfGW456L13_2013	0.26	+2.4
2,217,661	-		PfGW456L13_2013	0.26	+1.3
2,217,661	-				-1.1
2,217,860	+		PfGW456L13_2013	0.53	-0.7
2,217,860	+		PfGW456L13_2013	0.53	-2.2
2,217,860	+		PfGW456L13_2013	0.53	+1.8
2,217,860	+		PfGW456L13_2013	0.53	+1.0
2,217,861	-		PfGW456L13_2013	0.53	-2.9
2,217,861	-		PfGW456L13_2013	0.53	-2.2
2,217,861	-		PfGW456L13_2013	0.53	+2.9
2,217,861	-		PfGW456L13_2013	0.53	+2.4
2,217,861	-		PfGW456L13_2013	0.53	-1.8
2,217,861	-		PfGW456L13_2013	0.53	-0.9
2,217,861	-		PfGW456L13_2013	0.53	+1.2
2,217,861	-		PfGW456L13_2013	0.53	+1.8
2,217,861	-		PfGW456L13_2013	0.53	-0.1
2,217,900	+		PfGW456L13_2013	0.58	-1.6
2,217,900	+		PfGW456L13_2013	0.58	-1.6
2,217,901	-		PfGW456L13_2013	0.58	+0.1
2,217,939	+		PfGW456L13_2013	0.63	-0.5
2,217,939	+		PfGW456L13_2013	0.63	+2.4
2,217,939	+		PfGW456L13_2013	0.63	+2.8
2,217,939	+		PfGW456L13_2013	0.63	-3.1
2,217,939	+		PfGW456L13_2013	0.63	+0.3
2,217,939	+		PfGW456L13_2013	0.63	-1.8
2,217,939	+		PfGW456L13_2013	0.63	+1.3
2,217,939	+		PfGW456L13_2013	0.63	-1.2
2,217,939	+		PfGW456L13_2013	0.63	+1.5
2,217,939	+		PfGW456L13_2013	0.63	+1.5
2,217,939	+		PfGW456L13_2013	0.63	-3.2
2,217,939	+		PfGW456L13_2013	0.63	-2.8
2,217,939	+		PfGW456L13_2013	0.63	+0.3
2,217,939	+		PfGW456L13_2013	0.63	-0.9
2,217,939	+		PfGW456L13_2013	0.63	-1.0
2,217,939	+		PfGW456L13_2013	0.63	-3.4
2,217,939	+		PfGW456L13_2013	0.63	-2.9
2,217,939	+		PfGW456L13_2013	0.63	-0.9
2,217,939	+		PfGW456L13_2013	0.63	+0.5
2,217,939	+		PfGW456L13_2013	0.63	+2.2
2,217,939	+		PfGW456L13_2013	0.63	+0.6
2,217,939	+		PfGW456L13_2013	0.63	+1.1
2,217,939	+		PfGW456L13_2013	0.63	+1.2
2,217,939	+		PfGW456L13_2013	0.63	-1.6
2,217,939	+		PfGW456L13_2013	0.63	+0.5
2,217,939	+		PfGW456L13_2013	0.63	+3.0
2,217,939	+		PfGW456L13_2013	0.63	-0.5
2,217,940	-		PfGW456L13_2013	0.63	+3.6
2,217,940	-		PfGW456L13_2013	0.63	-2.9
2,217,940	-		PfGW456L13_2013	0.63	-0.9
2,217,940	-		PfGW456L13_2013	0.63	-0.8
2,217,940	-		PfGW456L13_2013	0.63	-0.5
2,217,940	-		PfGW456L13_2013	0.63	-2.7
2,217,940	-		PfGW456L13_2013	0.63	-1.6
2,217,940	-		PfGW456L13_2013	0.63	-1.9
2,217,940	-		PfGW456L13_2013	0.63	+4.1
2,217,940	-		PfGW456L13_2013	0.63	-1.5
2,217,940	-		PfGW456L13_2013	0.63	+0.4
2,217,940	-		PfGW456L13_2013	0.63	-1.1
2,217,940	-		PfGW456L13_2013	0.63	-1.5
2,217,940	-		PfGW456L13_2013	0.63	+1.3
2,217,940	-		PfGW456L13_2013	0.63	-1.1
2,217,959	-		PfGW456L13_2013	0.66	+0.8
2,217,959	-		PfGW456L13_2013	0.66	+1.2
2,218,054	+		PfGW456L13_2013	0.78	+0.3
2,218,054	+		PfGW456L13_2013	0.78	-2.5
2,218,054	+		PfGW456L13_2013	0.78	+1.6
2,218,054	+		PfGW456L13_2013	0.78	-3.0
2,218,054	+		PfGW456L13_2013	0.78	+0.4
2,218,054	+		PfGW456L13_2013	0.78	+2.2
2,218,054	+		PfGW456L13_2013	0.78	+1.1
2,218,054	+		PfGW456L13_2013	0.78	+2.3
2,218,054	+		PfGW456L13_2013	0.78	-0.2
2,218,054	+		PfGW456L13_2013	0.78	-0.3
2,218,055	-		PfGW456L13_2013	0.79	+2.4
2,218,055	-		PfGW456L13_2013	0.79	-2.2
2,218,055	-		PfGW456L13_2013	0.79	-3.2
2,218,055	-		PfGW456L13_2013	0.79	-1.6
2,218,055	-		PfGW456L13_2013	0.79	+1.7
2,218,058	+		PfGW456L13_2013	0.79	+2.0
2,218,058	+		PfGW456L13_2013	0.79	+1.0
2,218,058	+		PfGW456L13_2013	0.79	+0.8
2,218,058	+		PfGW456L13_2013	0.79	+2.6
2,218,058	+		PfGW456L13_2013	0.79	-2.6
2,218,058	+		PfGW456L13_2013	0.79	-3.6
2,218,058	+		PfGW456L13_2013	0.79	+0.6
2,218,058	+		PfGW456L13_2013	0.79	+0.8
2,218,058	+		PfGW456L13_2013	0.79	+0.2
2,218,058	+		PfGW456L13_2013	0.79	-1.6
2,218,058	+		PfGW456L13_2013	0.79	-2.7
2,218,058	+		PfGW456L13_2013	0.79	-1.9
2,218,058	+		PfGW456L13_2013	0.79	+0.8
2,218,058	+		PfGW456L13_2013	0.79	-3.4
2,218,058	+		PfGW456L13_2013	0.79	+1.1
2,218,058	+		PfGW456L13_2013	0.79	+0.1
2,218,058	+		PfGW456L13_2013	0.79	+1.6
2,218,058	+		PfGW456L13_2013	0.79	+0.2
2,218,058	+		PfGW456L13_2013	0.79	-3.3
2,218,058	+		PfGW456L13_2013	0.79	-1.9
2,218,058	+		PfGW456L13_2013	0.79	+0.6
2,218,058	+		PfGW456L13_2013	0.79	+0.3
2,218,058	+		PfGW456L13_2013	0.79	-2.8
2,218,058	+		PfGW456L13_2013	0.79	+1.9
2,218,058	+		PfGW456L13_2013	0.79	+0.1
2,218,058	+		PfGW456L13_2013	0.79	+0.3
2,218,058	+		PfGW456L13_2013	0.79	+2.4
2,218,058	+		PfGW456L13_2013	0.79	-3.2
2,218,058	+		PfGW456L13_2013	0.79	+0.8
2,218,059	-		PfGW456L13_2013	0.79	-1.4
2,218,059	-				-0.1
2,218,059	-		PfGW456L13_2013	0.79	-1.5
2,218,059	-		PfGW456L13_2013	0.79	-0.9
2,218,059	-		PfGW456L13_2013	0.79	-2.4
2,218,059	-		PfGW456L13_2013	0.79	-0.2
2,218,059	-		PfGW456L13_2013	0.79	+0.9
2,218,059	-		PfGW456L13_2013	0.79	+1.9
2,218,059	-		PfGW456L13_2013	0.79	+0.1
2,218,059	-		PfGW456L13_2013	0.79	-1.6
2,218,059	-		PfGW456L13_2013	0.79	-1.6
2,218,059	-		PfGW456L13_2013	0.79	+2.9
2,218,059	-		PfGW456L13_2013	0.79	-1.5
2,218,059	-		PfGW456L13_2013	0.79	-1.3
2,218,059	-		PfGW456L13_2013	0.79	-0.5
2,218,059	-		PfGW456L13_2013	0.79	-0.5
2,218,059	-		PfGW456L13_2013	0.79	-1.9
2,218,059	-		PfGW456L13_2013	0.79	+1.5
2,218,078	+		PfGW456L13_2013	0.82	+1.0
2,218,078	+		PfGW456L13_2013	0.82	+1.5
2,218,078	+		PfGW456L13_2013	0.82	+1.4
2,218,078	+		PfGW456L13_2013	0.82	+1.7
2,218,079	-		PfGW456L13_2013	0.82	+1.0
2,218,124	+		PfGW456L13_2013	0.88	-1.6
2,218,124	+		PfGW456L13_2013	0.88	+2.7
2,218,125	-		PfGW456L13_2013	0.88	-1.6
2,218,128	+		PfGW456L13_2013	0.88	-1.3
2,218,128	+		PfGW456L13_2013	0.88	+1.9
2,218,128	+		PfGW456L13_2013	0.88	+0.1
2,218,138	+		PfGW456L13_2013	0.90	-0.6
2,218,178	+				-2.2
2,218,178	+				-2.1
2,218,214	+				-0.0
2,218,398	-		PfGW456L13_2014	0.14	-0.5
2,218,398	-				-0.8
2,218,764	-		PfGW456L13_2014	0.50	-1.9
2,218,952	+		PfGW456L13_2014	0.69	-0.4
2,218,980	+		PfGW456L13_2014	0.72	+4.7
2,219,064	-		PfGW456L13_2014	0.80	+1.6
2,219,064	-		PfGW456L13_2014	0.80	+0.3
2,219,173	+				+0.3
2,219,173	+				+2.4
2,219,247	+				+4.0
2,219,247	+				+3.6
2,219,248	-				+1.2
2,219,248	-				-2.8
2,219,248	-				+0.7
2,219,292	+				+0.1
2,219,292	+				+2.8
2,219,293	-				-1.7
2,219,293	-				+2.3
2,219,293	-				-2.7
2,219,293	-				-2.2
2,219,420	+				+1.8
2,219,420	+				+4.4
2,219,421	-				+1.3
2,219,422	+				+4.3
2,219,422	+				+2.9
2,219,423	-				-0.9
2,219,423	-				+0.6
2,219,423	-				-2.2
2,219,444	+				-0.4
2,219,470	+		PfGW456L13_2015	0.20	+0.7
2,219,470	+		PfGW456L13_2015	0.20	+3.0
2,219,471	-		PfGW456L13_2015	0.21	-0.8
2,219,621	-				-0.3
2,219,621	-				-1.1
2,219,621	-				-0.8
2,219,621	-				-0.4
2,219,622	+				+2.3
2,219,622	+				-1.1
2,219,622	+				-1.3
2,219,622	+				-0.7
2,219,622	+				-0.2
2,219,622	+				+1.9
2,219,623	-				-3.1
2,219,623	-				+0.5
2,219,623	-				+0.9
2,219,632	+				-3.0
2,219,683	+				-0.1
2,219,699	+				-0.8
2,219,699	+				+0.6
2,219,699	+				+0.4
2,219,700	-				-0.9
2,219,770	-		PfGW456L13_2016	0.13	-2.4
2,219,831	-		PfGW456L13_2016	0.17	+2.2
2,219,843	-		PfGW456L13_2016	0.18	-1.1
2,219,843	-		PfGW456L13_2016	0.18	-1.7
2,219,931	-		PfGW456L13_2016	0.25	-1.9
2,219,931	-		PfGW456L13_2016	0.25	-0.7
2,219,931	-		PfGW456L13_2016	0.25	+1.4
2,219,944	-		PfGW456L13_2016	0.26	+0.4
2,219,977	-		PfGW456L13_2016	0.28	-0.3
2,220,112	+		PfGW456L13_2016	0.38	-3.0
2,220,112	+		PfGW456L13_2016	0.38	-1.9